RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 NPC1L1Q9UHC9 1359 aa16.52■□□□□ 0.24
CHKA-203ENST00000525155 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.24
CHKA-203ENST00000525155 KDM6AO15550 1401 aaPredicted RBP16.52■□□□□ 0.23
CHKA-203ENST00000525155 SSFA2P28290 1259 aa16.51■□□□□ 0.23
CHKA-203ENST00000525155 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
CHKA-203ENST00000525155 DCAF5Q96JK2 942 aa16.51■□□□□ 0.23
CHKA-203ENST00000525155 ITGB4P16144 1822 aa16.51■□□□□ 0.23
CHKA-203ENST00000525155 KDRP35968 1356 aa16.51■□□□□ 0.23
CHKA-203ENST00000525155 GNPATO15228 680 aa16.5■□□□□ 0.23
CHKA-203ENST00000525155 SULT6B1Q6IMI4 303 aa16.5■□□□□ 0.23
CHKA-203ENST00000525155 ZNF530Q6P9A1 599 aaPredicted RBP16.5■□□□□ 0.23
CHKA-203ENST00000525155 C4BP0C0L5 1744 aa16.5■□□□□ 0.23
CHKA-203ENST00000525155 C5P01031 1676 aa16.49■□□□□ 0.23
CHKA-203ENST00000525155 TAF1LQ8IZX4 1826 aa16.48■□□□□ 0.23
CHKA-203ENST00000525155 MTHFSP49914 203 aa16.48■□□□□ 0.23
CHKA-203ENST00000525155 DDX10Q13206 875 aaKnown RBP16.48■□□□□ 0.23
CHKA-203ENST00000525155 AMOTQ4VCS5 1084 aa16.48■□□□□ 0.23
CHKA-203ENST00000525155 NFATC2IPQ8NCF5 419 aa16.48■□□□□ 0.23
CHKA-203ENST00000525155 PLEKHG2Q9H7P9 1386 aa16.48■□□□□ 0.23
CHKA-203ENST00000525155 HMGB2P26583 209 aaKnown RBP16.47■□□□□ 0.23
CHKA-203ENST00000525155 ARHGEF1Q92888 912 aaKnown RBP16.47■□□□□ 0.23
CHKA-203ENST00000525155 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
CHKA-203ENST00000525155 LGR6Q9HBX8 967 aa16.47■□□□□ 0.23
CHKA-203ENST00000525155 WWC3Q9ULE0 1092 aa16.47■□□□□ 0.23
CHKA-203ENST00000525155 GRIN3BO60391 1043 aa16.46■□□□□ 0.23
CHKA-203ENST00000525155 HSP90AB1P08238 724 aaKnown RBP16.46■□□□□ 0.23
CHKA-203ENST00000525155 CABP4P57796 275 aa16.46■□□□□ 0.23
CHKA-203ENST00000525155 RC3H1Q5TC82 1133 aaKnown RBP16.46■□□□□ 0.23
CHKA-203ENST00000525155 MMP10P09238 476 aa16.45■□□□□ 0.22
CHKA-203ENST00000525155 C1QTNF8P60827 252 aa16.45■□□□□ 0.22
CHKA-203ENST00000525155 PTCD1O75127 700 aaKnown RBP16.44■□□□□ 0.22
CHKA-203ENST00000525155 RPS6KA4O75676 772 aa16.44■□□□□ 0.22
CHKA-203ENST00000525155 CC2D1BQ5T0F9 858 aaKnown RBP16.44■□□□□ 0.22
CHKA-203ENST00000525155 TRAPPC3LQ5T215 181 aa16.44■□□□□ 0.22
CHKA-203ENST00000525155 UBR3Q6ZT12 1888 aa16.44■□□□□ 0.22
CHKA-203ENST00000525155 GYS1P13807 737 aa16.43■□□□□ 0.22
CHKA-203ENST00000525155 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
CHKA-203ENST00000525155 HMOX1P09601 288 aa16.42■□□□□ 0.22
CHKA-203ENST00000525155 CNTNAP4Q9C0A0 1308 aa16.42■□□□□ 0.22
CHKA-203ENST00000525155 INTS5Q6P9B9 1019 aaKnown RBP16.41■□□□□ 0.22
CHKA-203ENST00000525155 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
CHKA-203ENST00000525155 C1orf141Q5JVX7 400 aa16.4■□□□□ 0.22
CHKA-203ENST00000525155 SRP68Q9UHB9 627 aaKnown RBP16.4■□□□□ 0.22
CHKA-203ENST00000525155 CHD4Q14839 1912 aa16.4■□□□□ 0.22
CHKA-203ENST00000525155 A0A0G2JLW4 131 aa16.39■□□□□ 0.21
CHKA-203ENST00000525155 RNMTO43148 476 aaKnown RBP16.39■□□□□ 0.21
CHKA-203ENST00000525155 KCNA3P22001 575 aa16.39■□□□□ 0.21
CHKA-203ENST00000525155 CRKLP46109 303 aaKnown RBP16.39■□□□□ 0.21
CHKA-203ENST00000525155 SLC39A6Q13433 755 aa16.39■□□□□ 0.21
CHKA-203ENST00000525155 RALBP1Q15311 655 aa16.39■□□□□ 0.21
CHKA-203ENST00000525155 AKAP4Q5JQC9 854 aa16.39■□□□□ 0.21
CHKA-203ENST00000525155 NLGN1Q8N2Q7 840 aa16.39■□□□□ 0.21
CHKA-203ENST00000525155 ADRA2BP18089 450 aa16.38■□□□□ 0.21
CHKA-203ENST00000525155 DNAJC10Q8IXB1 793 aa16.38■□□□□ 0.21
CHKA-203ENST00000525155 SLC52A2Q9HAB3 445 aa16.38■□□□□ 0.21
CHKA-203ENST00000525155 FKBP8Q14318 412 aa16.37■□□□□ 0.21
CHKA-203ENST00000525155 DIAPH1O60610 1272 aaKnown RBP16.36■□□□□ 0.21
CHKA-203ENST00000525155 RFC4P35249 363 aa16.36■□□□□ 0.21
CHKA-203ENST00000525155 DDR1Q08345 913 aa16.36■□□□□ 0.21
CHKA-203ENST00000525155 CNGB1Q14028 1251 aaPredicted RBP16.36■□□□□ 0.21
CHKA-203ENST00000525155 MYH14Q7Z406 1995 aaKnown RBP16.36■□□□□ 0.21
CHKA-203ENST00000525155 ADCY9O60503 1353 aa16.36■□□□□ 0.21
CHKA-203ENST00000525155 ATP10DQ9P241 1426 aa16.36■□□□□ 0.21
CHKA-203ENST00000525155 PXDNLA1KZ92 1463 aa16.35■□□□□ 0.21
CHKA-203ENST00000525155 DPEP1P16444 411 aa16.35■□□□□ 0.21
CHKA-203ENST00000525155 TGFB2P61812 414 aa16.35■□□□□ 0.21
CHKA-203ENST00000525155 CEP350Q5VT06 3117 aa16.35■□□□□ 0.21
CHKA-203ENST00000525155 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
CHKA-203ENST00000525155 CYP19A1P11511 503 aaPredicted RBP16.34■□□□□ 0.21
CHKA-203ENST00000525155 TM4SF1P30408 202 aa16.34■□□□□ 0.21
CHKA-203ENST00000525155 IL17REQ8NFR9 667 aa16.34■□□□□ 0.21
CHKA-203ENST00000525155 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.2
CHKA-203ENST00000525155 CFAP53Q96M91 514 aa16.33■□□□□ 0.2
CHKA-203ENST00000525155 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.2
CHKA-203ENST00000525155 C10orf71Q711Q0 1435 aa16.33■□□□□ 0.2
CHKA-203ENST00000525155 COL3A1P02461 1466 aaPredicted RBP16.32■□□□□ 0.2
CHKA-203ENST00000525155 ZNF831Q5JPB2 1677 aa16.32■□□□□ 0.2
CHKA-203ENST00000525155 BCL2L12Q9HB09 334 aa16.32■□□□□ 0.2
CHKA-203ENST00000525155 SOS1Q07889 1333 aaPredicted RBP16.31■□□□□ 0.2
CHKA-203ENST00000525155 PPP2R1AP30153 589 aa16.31■□□□□ 0.2
CHKA-203ENST00000525155 ZNF526Q8TF50 670 aaPredicted RBP16.31■□□□□ 0.2
CHKA-203ENST00000525155 PHACTR3Q96KR7 559 aa16.31■□□□□ 0.2
CHKA-203ENST00000525155 BCS1LQ9Y276 419 aa16.31■□□□□ 0.2
CHKA-203ENST00000525155 CCDC87Q9NVE4 849 aa16.3■□□□□ 0.2
CHKA-203ENST00000525155 ZBTB1Q9Y2K1 713 aa16.3■□□□□ 0.2
CHKA-203ENST00000525155 PARP3Q9Y6F1 533 aa16.3■□□□□ 0.2
CHKA-203ENST00000525155 COL5A3P25940 1745 aaPredicted RBP16.3■□□□□ 0.2
CHKA-203ENST00000525155 CICQ96RK0 1608 aaPredicted RBP16.3■□□□□ 0.2
CHKA-203ENST00000525155 POLRMTO00411 1230 aaKnown RBP16.29■□□□□ 0.2
CHKA-203ENST00000525155 ANP32CO43423 234 aa16.29■□□□□ 0.2
CHKA-203ENST00000525155 USPL1Q5W0Q7 1092 aa16.29■□□□□ 0.2
CHKA-203ENST00000525155 KIAA1551Q9HCM1 1747 aa16.28■□□□□ 0.2
CHKA-203ENST00000525155 MYBBP1AQ9BQG0 1328 aaKnown RBP16.28■□□□□ 0.2
CHKA-203ENST00000525155 KIF3CO14782 793 aa16.28■□□□□ 0.2
CHKA-203ENST00000525155 CHRNA5P30532 468 aa16.28■□□□□ 0.2
CHKA-203ENST00000525155 PRKRIP1Q9H875 184 aaPredicted RBP16.28■□□□□ 0.2
CHKA-203ENST00000525155 KCPQ6ZWJ8 1503 aa16.28■□□□□ 0.2
CHKA-203ENST00000525155 MRC1P22897 1456 aa16.28■□□□□ 0.2
CHKA-203ENST00000525155 U2SURPO15042 1029 aaKnown RBP16.27■□□□□ 0.2
CHKA-203ENST00000525155 KCNQ3O43525 872 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms