RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 DNMT3AQ9Y6K1 912 aaPredicted RBP6.89□□□□□ -1.31
LINCR-0001-203ENST00000524047 A0A1B0GTH6 734 aa6.88□□□□□ -1.31
LINCR-0001-203ENST00000524047 MX2P20592 715 aa6.88□□□□□ -1.31
LINCR-0001-203ENST00000524047 TSGA10IPQ3SY00 556 aa6.88□□□□□ -1.31
LINCR-0001-203ENST00000524047 SLFNL1Q499Z3 407 aa6.88□□□□□ -1.31
LINCR-0001-203ENST00000524047 CFHR5Q9BXR6 569 aa6.88□□□□□ -1.31
LINCR-0001-203ENST00000524047 THBS1P07996 1170 aa6.87□□□□□ -1.31
LINCR-0001-203ENST00000524047 GTF2E1P29083 439 aaPredicted RBP6.87□□□□□ -1.31
LINCR-0001-203ENST00000524047 LBRQ14739 615 aaKnown RBP6.87□□□□□ -1.31
LINCR-0001-203ENST00000524047 GNASQ5JWF2 1037 aa6.87□□□□□ -1.31
LINCR-0001-203ENST00000524047 ACDQ96AP0 544 aa6.87□□□□□ -1.31
LINCR-0001-203ENST00000524047 SIRT1Q96EB6 747 aa6.87□□□□□ -1.31
LINCR-0001-203ENST00000524047 FOXK2Q01167 660 aa6.86□□□□□ -1.31
LINCR-0001-203ENST00000524047 C4orf17Q53FE4 359 aa6.86□□□□□ -1.31
LINCR-0001-203ENST00000524047 TMEM214Q6NUQ4 689 aaKnown RBP6.86□□□□□ -1.31
LINCR-0001-203ENST00000524047 RNF135Q8IUD6 432 aa6.86□□□□□ -1.31
LINCR-0001-203ENST00000524047 ETNK1Q9HBU6 452 aa6.86□□□□□ -1.31
LINCR-0001-203ENST00000524047 IGHA1P01876 353 aa6.85□□□□□ -1.31
LINCR-0001-203ENST00000524047 PHKA2P46019 1235 aa6.85□□□□□ -1.31
LINCR-0001-203ENST00000524047 MAP2K3P46734 347 aa6.85□□□□□ -1.31
LINCR-0001-203ENST00000524047 VAC14Q08AM6 782 aa6.85□□□□□ -1.31
LINCR-0001-203ENST00000524047 UBAP2LQ14157 1087 aaKnown RBP6.85□□□□□ -1.31
LINCR-0001-203ENST00000524047 WASHC4Q2M389 1173 aa6.85□□□□□ -1.31
LINCR-0001-203ENST00000524047 PPARGC1BQ86YN6 1023 aaKnown RBP6.85□□□□□ -1.31
LINCR-0001-203ENST00000524047 RHBDD1Q8TEB9 315 aa6.85□□□□□ -1.31
LINCR-0001-203ENST00000524047 GPAMQ9HCL2 828 aa6.85□□□□□ -1.31
LINCR-0001-203ENST00000524047 PHF24Q9UPV7 400 aa6.85□□□□□ -1.31
LINCR-0001-203ENST00000524047 PHF20L1A8MW92 1017 aa6.84□□□□□ -1.31
LINCR-0001-203ENST00000524047 MCM6Q14566 821 aa6.84□□□□□ -1.31
LINCR-0001-203ENST00000524047 SUZ12Q15022 739 aaKnown RBP6.84□□□□□ -1.31
LINCR-0001-203ENST00000524047 TMEM132AQ24JP5 1023 aa6.84□□□□□ -1.31
LINCR-0001-203ENST00000524047 MAP7D1Q3KQU3 841 aa6.84□□□□□ -1.31
LINCR-0001-203ENST00000524047 BEND7Q8N7W2 519 aaPredicted RBP6.84□□□□□ -1.31
LINCR-0001-203ENST00000524047 NEDD1Q8NHV4 660 aa6.84□□□□□ -1.31
LINCR-0001-203ENST00000524047 GDPD2Q9HCC8 539 aa6.84□□□□□ -1.31
LINCR-0001-203ENST00000524047 CNTNAP5Q8WYK1 1306 aa6.83□□□□□ -1.32
LINCR-0001-203ENST00000524047 LOC100996750A0A140TA64 210 aa6.83□□□□□ -1.32
LINCR-0001-203ENST00000524047 OIP5O43482 229 aa6.83□□□□□ -1.32
LINCR-0001-203ENST00000524047 CSB-PGBD3P0DP91 1061 aa6.83□□□□□ -1.32
LINCR-0001-203ENST00000524047 MSX1P28360 303 aa6.83□□□□□ -1.32
LINCR-0001-203ENST00000524047 TLR1Q15399 786 aa6.83□□□□□ -1.32
LINCR-0001-203ENST00000524047 OXLD1Q5BKU9 147 aa6.83□□□□□ -1.32
LINCR-0001-203ENST00000524047 PGBD3Q8N328 593 aa6.83□□□□□ -1.32
LINCR-0001-203ENST00000524047 OXCT2Q9BYC2 517 aaPredicted RBP6.83□□□□□ -1.32
LINCR-0001-203ENST00000524047 KRTAP4-6Q9BYQ5 205 aa6.83□□□□□ -1.32
LINCR-0001-203ENST00000524047 STAU1O95793 577 aaKnown RBP6.82□□□□□ -1.32
LINCR-0001-203ENST00000524047 INHAP05111 366 aa6.82□□□□□ -1.32
LINCR-0001-203ENST00000524047 SOX11P35716 441 aa6.82□□□□□ -1.32
LINCR-0001-203ENST00000524047 ABL2P42684 1182 aa6.82□□□□□ -1.32
LINCR-0001-203ENST00000524047 SCNN1DP51172 638 aa6.82□□□□□ -1.32
LINCR-0001-203ENST00000524047 EFHC2Q5JST6 749 aa6.82□□□□□ -1.32
LINCR-0001-203ENST00000524047 PODNQ7Z5L7 613 aa6.82□□□□□ -1.32
LINCR-0001-203ENST00000524047 CRISPLD1Q9H336 500 aa6.82□□□□□ -1.32
LINCR-0001-203ENST00000524047 GPAT2Q6NUI2 795 aa6.81□□□□□ -1.32
LINCR-0001-203ENST00000524047 PLPP7Q8NBV4 271 aa6.81□□□□□ -1.32
LINCR-0001-203ENST00000524047 KLRG1Q96E93 195 aa6.81□□□□□ -1.32
LINCR-0001-203ENST00000524047 RUBCNLQ9H714 662 aa6.81□□□□□ -1.32
LINCR-0001-203ENST00000524047 ATXN7L1Q9ULK2 861 aaPredicted RBP6.81□□□□□ -1.32
LINCR-0001-203ENST00000524047 GDF10P55107 478 aa6.8□□□□□ -1.32
LINCR-0001-203ENST00000524047 SEMA3FQ13275 785 aa6.8□□□□□ -1.32
LINCR-0001-203ENST00000524047 C1orf216Q8TAB5 229 aa6.8□□□□□ -1.32
LINCR-0001-203ENST00000524047 DCAF5Q96JK2 942 aa6.8□□□□□ -1.32
LINCR-0001-203ENST00000524047 NDFIP2Q9NV92 336 aa6.8□□□□□ -1.32
LINCR-0001-203ENST00000524047 GDF2Q9UK05 429 aaPredicted RBP6.8□□□□□ -1.32
LINCR-0001-203ENST00000524047 SMTNP53814 917 aa6.79□□□□□ -1.32
LINCR-0001-203ENST00000524047 TBC1D9Q6ZT07 1266 aa6.79□□□□□ -1.32
LINCR-0001-203ENST00000524047 FIGNL1Q6PIW4 674 aa6.78□□□□□ -1.32
LINCR-0001-203ENST00000524047 GOLGA6L1Q8N7Z2 621 aa6.78□□□□□ -1.32
LINCR-0001-203ENST00000524047 GALNT6Q8NCL4 622 aa6.78□□□□□ -1.32
LINCR-0001-203ENST00000524047 SLC4A9Q96Q91 983 aa6.78□□□□□ -1.32
LINCR-0001-203ENST00000524047 NIFKQ9BYG3 293 aaKnown RBP6.78□□□□□ -1.32
LINCR-0001-203ENST00000524047 BNIP3LO60238 219 aa6.77□□□□□ -1.33
LINCR-0001-203ENST00000524047 FGFR3P22607 806 aa6.77□□□□□ -1.33
LINCR-0001-203ENST00000524047 PLA2G4AP47712 749 aa6.77□□□□□ -1.33
LINCR-0001-203ENST00000524047 FLIIQ13045 1269 aa6.77□□□□□ -1.33
LINCR-0001-203ENST00000524047 MTFR1Q15390 333 aa6.77□□□□□ -1.33
LINCR-0001-203ENST00000524047 PLA2G4EQ3MJ16 856 aa6.77□□□□□ -1.33
LINCR-0001-203ENST00000524047 C1orf229Q6ZS94 237 aaPredicted RBP6.77□□□□□ -1.33
LINCR-0001-203ENST00000524047 NLRP8Q86W28 1048 aa6.77□□□□□ -1.33
LINCR-0001-203ENST00000524047 ABHD17AQ96GS6 310 aa6.77□□□□□ -1.33
LINCR-0001-203ENST00000524047 DNAAF2Q9NVR5 837 aaKnown RBP6.77□□□□□ -1.33
LINCR-0001-203ENST00000524047 COG6Q9Y2V7 657 aa6.77□□□□□ -1.33
LINCR-0001-203ENST00000524047 TMEM229AB2RXF0 380 aa6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 SHISA8B8ZZ34 492 aa6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 CDK2AP1O14519 115 aa6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 C2CD2LO14523 706 aa6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 RAD21O60216 631 aa6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 BMP4P12644 408 aa6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 UBTFP17480 764 aaKnown RBP6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 ATP4AP20648 1035 aa6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 ZNF295-AS1Q8N0V1 137 aa6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 EDARADDQ8WWZ3 215 aa6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 POM121Q96HA1 1249 aa6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 PCDHGC4Q9Y5F7 938 aa6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 NISCHQ9Y2I1 1504 aa6.76□□□□□ -1.33
LINCR-0001-203ENST00000524047 LZTS3O60299 673 aaPredicted RBP6.75□□□□□ -1.33
LINCR-0001-203ENST00000524047 ITGB2P05107 769 aa6.75□□□□□ -1.33
LINCR-0001-203ENST00000524047 SNRPNP63162 240 aaKnown RBP6.75□□□□□ -1.33
LINCR-0001-203ENST00000524047 CTBSQ01459 385 aa6.75□□□□□ -1.33
LINCR-0001-203ENST00000524047 SLCO4C1Q6ZQN7 724 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms