RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 CCDC85AQ96PX6 553 aaPredicted RBP9.16□□□□□ -0.94
PCM1-219ENST00000523540 ENAMQ9NRM1 1142 aa9.16□□□□□ -0.94
PCM1-219ENST00000523540 TFIP11Q9UBB9 837 aaKnown RBP9.16□□□□□ -0.94
PCM1-219ENST00000523540 DOLKQ9UPQ8 538 aa9.16□□□□□ -0.94
PCM1-219ENST00000523540 CNTNAP5Q8WYK1 1306 aa9.15□□□□□ -0.94
PCM1-219ENST00000523540 PALM3A6NDB9 673 aaPredicted RBP9.15□□□□□ -0.94
PCM1-219ENST00000523540 RNF144AP50876 292 aaPredicted RBP9.15□□□□□ -0.94
PCM1-219ENST00000523540 USP4Q13107 963 aa9.15□□□□□ -0.94
PCM1-219ENST00000523540 PLPP7Q8NBV4 271 aa9.15□□□□□ -0.94
PCM1-219ENST00000523540 CCDC97Q96F63 343 aaPredicted RBP9.15□□□□□ -0.94
PCM1-219ENST00000523540 PCDHB11Q9Y5F2 797 aa9.15□□□□□ -0.94
PCM1-219ENST00000523540 PHF20L1A8MW92 1017 aa9.14□□□□□ -0.95
PCM1-219ENST00000523540 MSTNO14793 375 aa9.14□□□□□ -0.95
PCM1-219ENST00000523540 ATP9BO43861 1147 aa9.14□□□□□ -0.95
PCM1-219ENST00000523540 MYCP01106 439 aaPredicted RBP9.14□□□□□ -0.95
PCM1-219ENST00000523540 CFAP70Q5T0N1 1121 aa9.14□□□□□ -0.95
PCM1-219ENST00000523540 TRIM22Q8IYM9 498 aa9.14□□□□□ -0.95
PCM1-219ENST00000523540 SPOCK3Q9BQ16 436 aa9.14□□□□□ -0.95
PCM1-219ENST00000523540 IGF1RP08069 1367 aa9.13□□□□□ -0.95
PCM1-219ENST00000523540 PROCP04070 461 aa9.13□□□□□ -0.95
PCM1-219ENST00000523540 SKIP12755 728 aa9.13□□□□□ -0.95
PCM1-219ENST00000523540 RAB15P59190 212 aa9.13□□□□□ -0.95
PCM1-219ENST00000523540 GNRH1P01148 92 aa9.12□□□□□ -0.95
PCM1-219ENST00000523540 GPC1P35052 558 aa9.12□□□□□ -0.95
PCM1-219ENST00000523540 MAFBQ9Y5Q3 323 aaPredicted RBP9.12□□□□□ -0.95
PCM1-219ENST00000523540 WASLO00401 505 aaPredicted RBP9.11□□□□□ -0.95
PCM1-219ENST00000523540 BCRP11274 1271 aa9.11□□□□□ -0.95
PCM1-219ENST00000523540 RHOQP17081 205 aa9.11□□□□□ -0.95
PCM1-219ENST00000523540 DBN1Q16643 649 aa9.11□□□□□ -0.95
PCM1-219ENST00000523540 PRICKLE2Q7Z3G6 844 aa9.11□□□□□ -0.95
PCM1-219ENST00000523540 ARID3AQ99856 593 aa9.11□□□□□ -0.95
PCM1-219ENST00000523540 CDCA7Q9BWT1 371 aaPredicted RBP9.11□□□□□ -0.95
PCM1-219ENST00000523540 OSBPL3Q9H4L5 887 aa9.11□□□□□ -0.95
PCM1-219ENST00000523540 CYLDQ9NQC7 956 aa9.11□□□□□ -0.95
PCM1-219ENST00000523540 USP17L5A8MUK1 530 aa9.1□□□□□ -0.95
PCM1-219ENST00000523540 ATP5J2-PTCD1G3V325 749 aa9.1□□□□□ -0.95
PCM1-219ENST00000523540 GPR25O00155 361 aa9.1□□□□□ -0.95
PCM1-219ENST00000523540 EML3Q32P44 896 aa9.1□□□□□ -0.95
PCM1-219ENST00000523540 BEND7Q8N7W2 519 aaPredicted RBP9.1□□□□□ -0.95
PCM1-219ENST00000523540 ACDQ96AP0 544 aa9.1□□□□□ -0.95
PCM1-219ENST00000523540 LRRC4BQ9NT99 713 aa9.1□□□□□ -0.95
PCM1-219ENST00000523540 LMOD1P29536 600 aaPredicted RBP9.09□□□□□ -0.95
PCM1-219ENST00000523540 SCTRP47872 440 aa9.09□□□□□ -0.95
PCM1-219ENST00000523540 ESF1Q9H501 851 aaKnown RBP9.09□□□□□ -0.95
PCM1-219ENST00000523540 USP17L3A6NCW0 530 aa9.08□□□□□ -0.96
PCM1-219ENST00000523540 USP17L4A6NCW7 530 aa9.08□□□□□ -0.96
PCM1-219ENST00000523540 SRPK2P78362 688 aaKnown RBP9.08□□□□□ -0.96
PCM1-219ENST00000523540 NCOA4Q13772 614 aa9.08□□□□□ -0.96
PCM1-219ENST00000523540 USP17L2Q6R6M4 530 aa9.08□□□□□ -0.96
PCM1-219ENST00000523540 USP17L1Q7RTZ2 530 aa9.08□□□□□ -0.96
PCM1-219ENST00000523540 DEPDC4Q8N2C3 294 aa9.08□□□□□ -0.96
PCM1-219ENST00000523540 CLN3Q13286 438 aa9.07□□□□□ -0.96
PCM1-219ENST00000523540 TRIM50Q86XT4 487 aa9.07□□□□□ -0.96
PCM1-219ENST00000523540 DYRK1BQ9Y463 629 aa9.07□□□□□ -0.96
PCM1-219ENST00000523540 RFX1P22670 979 aa9.06□□□□□ -0.96
PCM1-219ENST00000523540 ESCO1Q5FWF5 840 aa9.06□□□□□ -0.96
PCM1-219ENST00000523540 KANK4Q5T7N3 995 aaPredicted RBP9.06□□□□□ -0.96
PCM1-219ENST00000523540 FOXR1Q6PIV2 292 aa9.06□□□□□ -0.96
PCM1-219ENST00000523540 NOD1Q9Y239 953 aa9.06□□□□□ -0.96
PCM1-219ENST00000523540 ATP1A2P50993 1020 aa9.05□□□□□ -0.96
PCM1-219ENST00000523540 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
PCM1-219ENST00000523540 PODNQ7Z5L7 613 aa9.05□□□□□ -0.96
PCM1-219ENST00000523540 NEDD1Q8NHV4 660 aa9.05□□□□□ -0.96
PCM1-219ENST00000523540 GTPBP3Q969Y2 492 aaKnown RBP9.05□□□□□ -0.96
PCM1-219ENST00000523540 H7C1W4 665 aa9.04□□□□□ -0.96
PCM1-219ENST00000523540 MKRN1Q9UHC7 482 aaKnown RBP9.04□□□□□ -0.96
PCM1-219ENST00000523540 HRH3Q9Y5N1 445 aa9.04□□□□□ -0.96
PCM1-219ENST00000523540 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.03□□□□□ -0.96
PCM1-219ENST00000523540 RIPOR1Q6ZS17 1223 aa9.03□□□□□ -0.96
PCM1-219ENST00000523540 XAGE2Q96GT9 111 aa9.03□□□□□ -0.96
PCM1-219ENST00000523540 ESYT1Q9BSJ8 1104 aa9.03□□□□□ -0.96
PCM1-219ENST00000523540 A0A1W2PRU2 124 aa9.02□□□□□ -0.97
PCM1-219ENST00000523540 OIP5O43482 229 aa9.02□□□□□ -0.97
PCM1-219ENST00000523540 WDR44Q5JSH3 913 aa9.02□□□□□ -0.97
PCM1-219ENST00000523540 PBXIP1Q96AQ6 731 aa9.02□□□□□ -0.97
PCM1-219ENST00000523540 GRIP2Q9C0E4 1043 aa9.02□□□□□ -0.97
PCM1-219ENST00000523540 VRTNQ9H8Y1 702 aa9.02□□□□□ -0.97
PCM1-219ENST00000523540 PCDHGA11Q9Y5H2 935 aa9.02□□□□□ -0.97
PCM1-219ENST00000523540 SPATA31C2B4DYI2 1134 aa9.01□□□□□ -0.97
PCM1-219ENST00000523540 M0R2N6 131 aa9.01□□□□□ -0.97
PCM1-219ENST00000523540 MX2P20592 715 aa9.01□□□□□ -0.97
PCM1-219ENST00000523540 LARGE2Q8N3Y3 721 aa9.01□□□□□ -0.97
PCM1-219ENST00000523540 TRERF1Q96PN7 1200 aa9.01□□□□□ -0.97
PCM1-219ENST00000523540 MEN1O00255 615 aa9□□□□□ -0.97
PCM1-219ENST00000523540 PPP1R15AO75807 674 aaPredicted RBP9□□□□□ -0.97
PCM1-219ENST00000523540 SCNN1DP51172 638 aa9□□□□□ -0.97
PCM1-219ENST00000523540 GTF2IP78347 998 aa9□□□□□ -0.97
PCM1-219ENST00000523540 POU4F2Q12837 409 aa9□□□□□ -0.97
PCM1-219ENST00000523540 CDCA8Q53HL2 280 aa9□□□□□ -0.97
PCM1-219ENST00000523540 NBPF10Q6P3W6 841 aaKnown RBP9□□□□□ -0.97
PCM1-219ENST00000523540 SIX5Q8N196 739 aa9□□□□□ -0.97
PCM1-219ENST00000523540 NBPF15Q8N660 670 aa9□□□□□ -0.97
PCM1-219ENST00000523540 SLC4A9Q96Q91 983 aa9□□□□□ -0.97
PCM1-219ENST00000523540 KRBA1A5PL33 1030 aa8.99□□□□□ -0.97
PCM1-219ENST00000523540 FAM196BA6NMK8 535 aa8.99□□□□□ -0.97
PCM1-219ENST00000523540 K7ELQ4 463 aaPredicted RBP8.99□□□□□ -0.97
PCM1-219ENST00000523540 ZBTB7BO15156 539 aaPredicted RBP8.99□□□□□ -0.97
PCM1-219ENST00000523540 INHAP05111 366 aa8.99□□□□□ -0.97
PCM1-219ENST00000523540 THBS1P07996 1170 aa8.99□□□□□ -0.97
PCM1-219ENST00000523540 CLDN10P78369 228 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 557.5 ms