RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 KDM3BQ7LBC6 1761 aa19.77■□□□□ 0.76
CTNNA1-236ENST00000522792 KCNQ3O43525 872 aa19.76■□□□□ 0.75
CTNNA1-236ENST00000522792 SCN11AQ9UI33 1791 aa19.76■□□□□ 0.75
CTNNA1-236ENST00000522792 IPO8O15397 1037 aaKnown RBP19.76■□□□□ 0.75
CTNNA1-236ENST00000522792 BRPF1P55201 1214 aaPredicted RBP19.76■□□□□ 0.75
CTNNA1-236ENST00000522792 JCADQ9P266 1359 aa19.75■□□□□ 0.75
CTNNA1-236ENST00000522792 SIPA1L3O60292 1781 aaPredicted RBP19.75■□□□□ 0.75
CTNNA1-236ENST00000522792 PCDH11XQ9BZA7 1347 aa19.75■□□□□ 0.75
CTNNA1-236ENST00000522792 PCDH11YQ9BZA8 1340 aa19.75■□□□□ 0.75
CTNNA1-236ENST00000522792 PPP4R3CPQ6ZMV5 832 aa19.74■□□□□ 0.75
CTNNA1-236ENST00000522792 MS4A1P11836 297 aa19.73■□□□□ 0.75
CTNNA1-236ENST00000522792 DCAF5Q96JK2 942 aa19.73■□□□□ 0.75
CTNNA1-236ENST00000522792 NRAPQ86VF7 1730 aa19.73■□□□□ 0.75
CTNNA1-236ENST00000522792 SHANK3Q9BYB0 1731 aa19.73■□□□□ 0.75
CTNNA1-236ENST00000522792 EIF4A1P60842 406 aaKnown RBP19.73■□□□□ 0.75
CTNNA1-236ENST00000522792 DDX54Q8TDD1 881 aaKnown RBP19.73■□□□□ 0.75
CTNNA1-236ENST00000522792 NECTIN2Q92692 538 aa19.73■□□□□ 0.75
CTNNA1-236ENST00000522792 HSP90AB1P08238 724 aaKnown RBP19.72■□□□□ 0.75
CTNNA1-236ENST00000522792 SLC52A2Q9HAB3 445 aa19.72■□□□□ 0.75
CTNNA1-236ENST00000522792 MVPQ14764 893 aaKnown RBP19.71■□□□□ 0.75
CTNNA1-236ENST00000522792 TMEM57Q8N5G2 664 aa19.71■□□□□ 0.75
CTNNA1-236ENST00000522792 NFATC2IPQ8NCF5 419 aa19.71■□□□□ 0.75
CTNNA1-236ENST00000522792 ITPRIPQ8IWB1 547 aa19.7■□□□□ 0.74
CTNNA1-236ENST00000522792 SLC4A2P04920 1241 aa19.69■□□□□ 0.74
CTNNA1-236ENST00000522792 ARHGAP45Q92619 1136 aa19.69■□□□□ 0.74
CTNNA1-236ENST00000522792 MRC1P22897 1456 aa19.69■□□□□ 0.74
CTNNA1-236ENST00000522792 DISP2A7MBM2 1401 aa19.69■□□□□ 0.74
CTNNA1-236ENST00000522792 HSPA1LP34931 641 aa19.68■□□□□ 0.74
CTNNA1-236ENST00000522792 SLC39A6Q13433 755 aa19.68■□□□□ 0.74
CTNNA1-236ENST00000522792 C8orf37Q96NL8 207 aa19.68■□□□□ 0.74
CTNNA1-236ENST00000522792 SLIT2O94813 1529 aa19.68■□□□□ 0.74
CTNNA1-236ENST00000522792 CABP4P57796 275 aa19.68■□□□□ 0.74
CTNNA1-236ENST00000522792 CCDC30Q5VVM6 783 aa19.68■□□□□ 0.74
CTNNA1-236ENST00000522792 STK31Q9BXU1 1019 aa19.68■□□□□ 0.74
CTNNA1-236ENST00000522792 SOS1Q07889 1333 aaPredicted RBP19.67■□□□□ 0.74
CTNNA1-236ENST00000522792 NWD2Q9ULI1 1742 aa19.67■□□□□ 0.74
CTNNA1-236ENST00000522792 HDGFL1Q5TGJ6 251 aa19.67■□□□□ 0.74
CTNNA1-236ENST00000522792 WNK3Q9BYP7 1800 aa19.67■□□□□ 0.74
CTNNA1-236ENST00000522792 EIF2S2P20042 333 aaKnown RBP19.66■□□□□ 0.74
CTNNA1-236ENST00000522792 G2E3Q7L622 706 aa19.66■□□□□ 0.74
CTNNA1-236ENST00000522792 API5Q9BZZ5 524 aaKnown RBP19.66■□□□□ 0.74
CTNNA1-236ENST00000522792 CCDC9Q9Y3X0 531 aaKnown RBP19.66■□□□□ 0.74
CTNNA1-236ENST00000522792 SPATA31A1Q5TZJ5 1347 aa19.66■□□□□ 0.74
CTNNA1-236ENST00000522792 MYT1Q01538 1121 aa19.66■□□□□ 0.74
CTNNA1-236ENST00000522792 LRP6O75581 1613 aa19.66■□□□□ 0.74
CTNNA1-236ENST00000522792 ZNF790Q6PG37 636 aa19.65■□□□□ 0.74
CTNNA1-236ENST00000522792 NGLY1Q96IV0 654 aa19.65■□□□□ 0.74
CTNNA1-236ENST00000522792 ABCC4O15439 1325 aa19.65■□□□□ 0.74
CTNNA1-236ENST00000522792 NKX1-1Q15270 411 aaPredicted RBP19.64■□□□□ 0.74
CTNNA1-236ENST00000522792 DDX19BQ9UMR2 479 aa19.64■□□□□ 0.74
CTNNA1-236ENST00000522792 RGS12O14924 1447 aa19.64■□□□□ 0.73
CTNNA1-236ENST00000522792 PRAMEF22A3QJZ6 481 aa19.64■□□□□ 0.73
CTNNA1-236ENST00000522792 SPATA31A6Q5VVP1 1343 aa19.64■□□□□ 0.73
CTNNA1-236ENST00000522792 HOXB7P09629 217 aa19.63■□□□□ 0.73
CTNNA1-236ENST00000522792 PTPRCP08575 1304 aa19.63■□□□□ 0.73
CTNNA1-236ENST00000522792 GIGYF1O75420 1035 aaPredicted RBP19.63■□□□□ 0.73
CTNNA1-236ENST00000522792 SPATA31A5Q5VU36 1347 aa19.62■□□□□ 0.73
CTNNA1-236ENST00000522792 SPATA31A7Q8IWB4 1347 aa19.62■□□□□ 0.73
CTNNA1-236ENST00000522792 HEG1Q9ULI3 1381 aa19.62■□□□□ 0.73
CTNNA1-236ENST00000522792 TOGARAM1Q9Y4F4 1720 aa19.62■□□□□ 0.73
CTNNA1-236ENST00000522792 UNC5CLQ8IV45 518 aa19.62■□□□□ 0.73
CTNNA1-236ENST00000522792 TTC5Q8N0Z6 440 aa19.62■□□□□ 0.73
CTNNA1-236ENST00000522792 ERVV-2B6SEH9 535 aa19.61■□□□□ 0.73
CTNNA1-236ENST00000522792 EXOC5O00471 708 aa19.61■□□□□ 0.73
CTNNA1-236ENST00000522792 CHPF2Q9P2E5 772 aa19.61■□□□□ 0.73
CTNNA1-236ENST00000522792 THRAP3Q9Y2W1 955 aaKnown RBP19.61■□□□□ 0.73
CTNNA1-236ENST00000522792 PCDHB15Q9Y5E8 787 aa19.61■□□□□ 0.73
CTNNA1-236ENST00000522792 FLIIQ13045 1269 aa19.6■□□□□ 0.73
CTNNA1-236ENST00000522792 AAMPQ13685 434 aa19.6■□□□□ 0.73
CTNNA1-236ENST00000522792 ZNF496Q96IT1 587 aaPredicted RBP19.6■□□□□ 0.73
CTNNA1-236ENST00000522792 KDM2BQ8NHM5 1336 aa19.6■□□□□ 0.73
CTNNA1-236ENST00000522792 C5P01031 1676 aa19.6■□□□□ 0.73
CTNNA1-236ENST00000522792 TNS2Q63HR2 1409 aa19.59■□□□□ 0.73
CTNNA1-236ENST00000522792 BCL9LQ86UU0 1499 aa19.59■□□□□ 0.73
CTNNA1-236ENST00000522792 F6X3S4 739 aa19.59■□□□□ 0.73
CTNNA1-236ENST00000522792 IGHDP01880 384 aa19.58■□□□□ 0.73
CTNNA1-236ENST00000522792 ANXA1P04083 346 aa19.58■□□□□ 0.73
CTNNA1-236ENST00000522792 FKBP5Q13451 457 aaPredicted RBP19.58■□□□□ 0.73
CTNNA1-236ENST00000522792 MEX3CQ5U5Q3 659 aaKnown RBP19.58■□□□□ 0.73
CTNNA1-236ENST00000522792 CDCA7Q9BWT1 371 aaPredicted RBP19.58■□□□□ 0.73
CTNNA1-236ENST00000522792 PHAXQ9H814 394 aaKnown RBP19.58■□□□□ 0.73
CTNNA1-236ENST00000522792 CENPQQ7L2Z9 268 aaPredicted RBP19.58■□□□□ 0.72
CTNNA1-236ENST00000522792 FMNL2Q96PY5 1086 aa19.57■□□□□ 0.72
CTNNA1-236ENST00000522792 ZBTB40Q9NUA8 1239 aa19.57■□□□□ 0.72
CTNNA1-236ENST00000522792 ZBTB7BO15156 539 aaPredicted RBP19.56■□□□□ 0.72
CTNNA1-236ENST00000522792 DDB1Q16531 1140 aa19.56■□□□□ 0.72
CTNNA1-236ENST00000522792 SLC4A10Q6U841 1118 aa19.56■□□□□ 0.72
CTNNA1-236ENST00000522792 FNBP4Q8N3X1 1017 aaPredicted RBP19.56■□□□□ 0.72
CTNNA1-236ENST00000522792 CHMP4AQ9BY43 222 aa19.56■□□□□ 0.72
CTNNA1-236ENST00000522792 INTS3Q68E01 1043 aaKnown RBP19.56■□□□□ 0.72
CTNNA1-236ENST00000522792 TMOD3Q9NYL9 352 aa19.56■□□□□ 0.72
CTNNA1-236ENST00000522792 USP21Q9UK80 565 aa19.56■□□□□ 0.72
CTNNA1-236ENST00000522792 PAPPAQ13219 1627 aa19.55■□□□□ 0.72
CTNNA1-236ENST00000522792 CACNA1FO60840 1977 aa19.55■□□□□ 0.72
CTNNA1-236ENST00000522792 VPS72Q15906 364 aa19.55■□□□□ 0.72
CTNNA1-236ENST00000522792 BARGINQ6ZT62 677 aa19.55■□□□□ 0.72
CTNNA1-236ENST00000522792 FAM98CQ17RN3 349 aaKnown RBP19.54■□□□□ 0.72
CTNNA1-236ENST00000522792 PROSER3Q2NL68 480 aa19.54■□□□□ 0.72
CTNNA1-236ENST00000522792 DBF4Q9UBU7 674 aaPredicted RBP19.54■□□□□ 0.72
CTNNA1-236ENST00000522792 SNRPA1P09661 255 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms