RNA–Protein interactions for RNA: ENST00000519442.1

SOX30-203, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX30, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-203ENST00000519442 TMEM57Q8N5G2 664 aa17■□□□□ 0.31
SOX30-203ENST00000519442 PCDH11XQ9BZA7 1347 aa16.99■□□□□ 0.31
SOX30-203ENST00000519442 PCDH11YQ9BZA8 1340 aa16.99■□□□□ 0.31
SOX30-203ENST00000519442 CYP27B1O15528 508 aa16.99■□□□□ 0.31
SOX30-203ENST00000519442 EIF4A1P60842 406 aaKnown RBP16.99■□□□□ 0.31
SOX30-203ENST00000519442 ZCRB1Q8TBF4 217 aaKnown RBP16.99■□□□□ 0.31
SOX30-203ENST00000519442 DCAF5Q96JK2 942 aa16.99■□□□□ 0.31
SOX30-203ENST00000519442 ADAMTS7Q9UKP4 1686 aa16.99■□□□□ 0.31
SOX30-203ENST00000519442 KDM6AO15550 1401 aaPredicted RBP16.99■□□□□ 0.31
SOX30-203ENST00000519442 CCDC30Q5VVM6 783 aa16.98■□□□□ 0.31
SOX30-203ENST00000519442 STK31Q9BXU1 1019 aa16.98■□□□□ 0.31
SOX30-203ENST00000519442 USP35Q9P2H5 1018 aa16.98■□□□□ 0.31
SOX30-203ENST00000519442 ADAMTS2O95450 1211 aa16.97■□□□□ 0.31
SOX30-203ENST00000519442 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
SOX30-203ENST00000519442 SLC52A2Q9HAB3 445 aa16.97■□□□□ 0.31
SOX30-203ENST00000519442 KDM3BQ7LBC6 1761 aa16.97■□□□□ 0.31
SOX30-203ENST00000519442 PTPRCP08575 1304 aa16.97■□□□□ 0.31
SOX30-203ENST00000519442 HOXB7P09629 217 aa16.97■□□□□ 0.31
SOX30-203ENST00000519442 CENPQQ7L2Z9 268 aaPredicted RBP16.97■□□□□ 0.31
SOX30-203ENST00000519442 ABCC4O15439 1325 aa16.96■□□□□ 0.31
SOX30-203ENST00000519442 NUTM2BA6NNL0 878 aaPredicted RBP16.96■□□□□ 0.31
SOX30-203ENST00000519442 NUTM2EB1AL46 878 aaPredicted RBP16.96■□□□□ 0.31
SOX30-203ENST00000519442 KCNQ3O43525 872 aa16.96■□□□□ 0.31
SOX30-203ENST00000519442 NUTM2AQ8IVF1 878 aaPredicted RBP16.96■□□□□ 0.31
SOX30-203ENST00000519442 CHMP4AQ9BY43 222 aa16.96■□□□□ 0.31
SOX30-203ENST00000519442 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.31
SOX30-203ENST00000519442 HDGFL1Q5TGJ6 251 aa16.95■□□□□ 0.3
SOX30-203ENST00000519442 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
SOX30-203ENST00000519442 CHMP4BQ9H444 224 aaKnown RBP16.94■□□□□ 0.3
SOX30-203ENST00000519442 VIRMAQ69YN4 1812 aaKnown RBP16.94■□□□□ 0.3
SOX30-203ENST00000519442 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
SOX30-203ENST00000519442 HSPA1LP34931 641 aa16.94■□□□□ 0.3
SOX30-203ENST00000519442 NFATC2IPQ8NCF5 419 aa16.94■□□□□ 0.3
SOX30-203ENST00000519442 MRC1P22897 1456 aa16.93■□□□□ 0.3
SOX30-203ENST00000519442 CABP4P57796 275 aa16.93■□□□□ 0.3
SOX30-203ENST00000519442 SIPA1L3O60292 1781 aaPredicted RBP16.93■□□□□ 0.3
SOX30-203ENST00000519442 JCADQ9P266 1359 aa16.93■□□□□ 0.3
SOX30-203ENST00000519442 EIF2S2P20042 333 aaKnown RBP16.92■□□□□ 0.3
SOX30-203ENST00000519442 ZNF790Q6PG37 636 aa16.92■□□□□ 0.3
SOX30-203ENST00000519442 DDX54Q8TDD1 881 aaKnown RBP16.92■□□□□ 0.3
SOX30-203ENST00000519442 PCDHB15Q9Y5E8 787 aa16.91■□□□□ 0.3
SOX30-203ENST00000519442 PLCH1Q4KWH8 1693 aa16.91■□□□□ 0.3
SOX30-203ENST00000519442 RGS12O14924 1447 aa16.91■□□□□ 0.3
SOX30-203ENST00000519442 SLC39A6Q13433 755 aa16.91■□□□□ 0.3
SOX30-203ENST00000519442 NKX1-1Q15270 411 aaPredicted RBP16.91■□□□□ 0.3
SOX30-203ENST00000519442 G2E3Q7L622 706 aa16.91■□□□□ 0.3
SOX30-203ENST00000519442 ZBTB40Q9NUA8 1239 aa16.91■□□□□ 0.3
SOX30-203ENST00000519442 GIGYF1O75420 1035 aaPredicted RBP16.9■□□□□ 0.3
SOX30-203ENST00000519442 IGHDP01880 384 aa16.9■□□□□ 0.3
SOX30-203ENST00000519442 FLIIQ13045 1269 aa16.9■□□□□ 0.3
SOX30-203ENST00000519442 TTC5Q8N0Z6 440 aa16.9■□□□□ 0.3
SOX30-203ENST00000519442 HEG1Q9ULI3 1381 aa16.9■□□□□ 0.3
SOX30-203ENST00000519442 DISP2A7MBM2 1401 aa16.9■□□□□ 0.3
SOX30-203ENST00000519442 ERVV-2B6SEH9 535 aa16.89■□□□□ 0.29
SOX30-203ENST00000519442 ZBTB7BO15156 539 aaPredicted RBP16.89■□□□□ 0.29
SOX30-203ENST00000519442 INTS3Q68E01 1043 aaKnown RBP16.89■□□□□ 0.29
SOX30-203ENST00000519442 FKBP5Q13451 457 aaPredicted RBP16.88■□□□□ 0.29
SOX30-203ENST00000519442 RWDD1Q9H446 243 aaPredicted RBP16.88■□□□□ 0.29
SOX30-203ENST00000519442 THRAP3Q9Y2W1 955 aaKnown RBP16.88■□□□□ 0.29
SOX30-203ENST00000519442 NRAPQ86VF7 1730 aa16.87■□□□□ 0.29
SOX30-203ENST00000519442 FBXO41Q8TF61 875 aa16.87■□□□□ 0.29
SOX30-203ENST00000519442 CHPF2Q9P2E5 772 aa16.87■□□□□ 0.29
SOX30-203ENST00000519442 SHANK3Q9BYB0 1731 aa16.87■□□□□ 0.29
SOX30-203ENST00000519442 SLIT2O94813 1529 aa16.86■□□□□ 0.29
SOX30-203ENST00000519442 SPATA31A1Q5TZJ5 1347 aa16.86■□□□□ 0.29
SOX30-203ENST00000519442 SPATA31A6Q5VVP1 1343 aa16.86■□□□□ 0.29
SOX30-203ENST00000519442 CDCA7Q9BWT1 371 aaPredicted RBP16.86■□□□□ 0.29
SOX30-203ENST00000519442 DBF4Q9UBU7 674 aaPredicted RBP16.86■□□□□ 0.29
SOX30-203ENST00000519442 F6X3S4 739 aa16.85■□□□□ 0.29
SOX30-203ENST00000519442 EXOC5O00471 708 aa16.85■□□□□ 0.29
SOX30-203ENST00000519442 SLC4A10Q6U841 1118 aa16.85■□□□□ 0.29
SOX30-203ENST00000519442 FMNL2Q96PY5 1086 aa16.85■□□□□ 0.29
SOX30-203ENST00000519442 PRAMEF22A3QJZ6 481 aa16.85■□□□□ 0.29
SOX30-203ENST00000519442 CCT4P50991 539 aaKnown RBP16.85■□□□□ 0.29
SOX30-203ENST00000519442 ZNF496Q96IT1 587 aaPredicted RBP16.85■□□□□ 0.29
SOX30-203ENST00000519442 PHAXQ9H814 394 aaKnown RBP16.85■□□□□ 0.29
SOX30-203ENST00000519442 TSHZ2Q9NRE2 1034 aa16.85■□□□□ 0.29
SOX30-203ENST00000519442 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
SOX30-203ENST00000519442 NWD2Q9ULI1 1742 aa16.84■□□□□ 0.29
SOX30-203ENST00000519442 C8orf37Q96NL8 207 aa16.84■□□□□ 0.29
SOX30-203ENST00000519442 SPATA31A5Q5VU36 1347 aa16.83■□□□□ 0.29
SOX30-203ENST00000519442 SPATA31A7Q8IWB4 1347 aa16.83■□□□□ 0.29
SOX30-203ENST00000519442 SNRPA1P09661 255 aaKnown RBP16.83■□□□□ 0.28
SOX30-203ENST00000519442 HDAC1Q13547 482 aaPredicted RBP16.83■□□□□ 0.28
SOX30-203ENST00000519442 NGLY1Q96IV0 654 aa16.83■□□□□ 0.28
SOX30-203ENST00000519442 TNS2Q63HR2 1409 aa16.82■□□□□ 0.28
SOX30-203ENST00000519442 UNC5CLQ8IV45 518 aa16.82■□□□□ 0.28
SOX30-203ENST00000519442 CACNA1FO60840 1977 aa16.82■□□□□ 0.28
SOX30-203ENST00000519442 ANXA1P04083 346 aa16.81■□□□□ 0.28
SOX30-203ENST00000519442 C1orf115Q9H7X2 142 aa16.81■□□□□ 0.28
SOX30-203ENST00000519442 TMOD3Q9NYL9 352 aa16.81■□□□□ 0.28
SOX30-203ENST00000519442 PXDNLA1KZ92 1463 aa16.81■□□□□ 0.28
SOX30-203ENST00000519442 HYPKQ9NX55 129 aa16.81■□□□□ 0.28
SOX30-203ENST00000519442 WNK3Q9BYP7 1800 aa16.8■□□□□ 0.28
SOX30-203ENST00000519442 DDB1Q16531 1140 aa16.8■□□□□ 0.28
SOX30-203ENST00000519442 BARGINQ6ZT62 677 aa16.8■□□□□ 0.28
SOX30-203ENST00000519442 SKAP1Q86WV1 359 aa16.8■□□□□ 0.28
SOX30-203ENST00000519442 DDX21Q9NR30 783 aaKnown RBP eCLIP16.8■□□□□ 0.28
SOX30-203ENST00000519442 PROSER3Q2NL68 480 aa16.78■□□□□ 0.28
SOX30-203ENST00000519442 MEIS3Q99687 375 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms