RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 TFCP2L1Q9NZI6 479 aa16.55■□□□□ 0.24
MRPS28-202ENST00000518271 C4AP0C0L4 1744 aa16.54■□□□□ 0.24
MRPS28-202ENST00000518271 LOC102724428A0A0B4J2F2 783 aa16.54■□□□□ 0.24
MRPS28-202ENST00000518271 HSP90AB1P08238 724 aaKnown RBP16.54■□□□□ 0.24
MRPS28-202ENST00000518271 SIK1P57059 783 aa16.54■□□□□ 0.24
MRPS28-202ENST00000518271 LINC00116Q8NCU8 138 aa16.54■□□□□ 0.24
MRPS28-202ENST00000518271 PPP1R1BQ9UD71 204 aaPredicted RBP16.54■□□□□ 0.24
MRPS28-202ENST00000518271 UTRNP46939 3433 aa16.53■□□□□ 0.24
MRPS28-202ENST00000518271 PPP2R1AP30153 589 aa16.53■□□□□ 0.24
MRPS28-202ENST00000518271 COL23A1Q86Y22 540 aaPredicted RBP16.53■□□□□ 0.24
MRPS28-202ENST00000518271 SLC16A10Q8TF71 515 aa16.53■□□□□ 0.24
MRPS28-202ENST00000518271 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
MRPS28-202ENST00000518271 MTHFSDQ2M296 383 aaKnown RBP16.51■□□□□ 0.23
MRPS28-202ENST00000518271 C1orf141Q5JVX7 400 aa16.51■□□□□ 0.23
MRPS28-202ENST00000518271 SMIM5Q71RC9 77 aa16.51■□□□□ 0.23
MRPS28-202ENST00000518271 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
MRPS28-202ENST00000518271 AKAP4Q5JQC9 854 aa16.5■□□□□ 0.23
MRPS28-202ENST00000518271 FHDC1Q9C0D6 1143 aaPredicted RBP16.5■□□□□ 0.23
MRPS28-202ENST00000518271 DLG5Q8TDM6 1919 aa16.49■□□□□ 0.23
MRPS28-202ENST00000518271 ARXQ96QS3 562 aa16.49■□□□□ 0.23
MRPS28-202ENST00000518271 LGR6Q9HBX8 967 aa16.49■□□□□ 0.23
MRPS28-202ENST00000518271 CABP4P57796 275 aa16.48■□□□□ 0.23
MRPS28-202ENST00000518271 NFATC2IPQ8NCF5 419 aa16.48■□□□□ 0.23
MRPS28-202ENST00000518271 U2SURPO15042 1029 aaKnown RBP16.47■□□□□ 0.23
MRPS28-202ENST00000518271 RNMTO43148 476 aaKnown RBP16.47■□□□□ 0.23
MRPS28-202ENST00000518271 ATP6V1AP38606 617 aa16.47■□□□□ 0.23
MRPS28-202ENST00000518271 AK7Q96M32 723 aa16.47■□□□□ 0.23
MRPS28-202ENST00000518271 SYT17Q9BSW7 474 aa16.47■□□□□ 0.23
MRPS28-202ENST00000518271 RSPH6AQ9H0K4 717 aa16.47■□□□□ 0.23
MRPS28-202ENST00000518271 SLC52A2Q9HAB3 445 aa16.46■□□□□ 0.23
MRPS28-202ENST00000518271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.45■□□□□ 0.22
MRPS28-202ENST00000518271 MSL1Q68DK7 614 aa16.45■□□□□ 0.22
MRPS28-202ENST00000518271 CHD4Q14839 1912 aa16.45■□□□□ 0.22
MRPS28-202ENST00000518271 KIF13BQ9NQT8 1826 aa16.45■□□□□ 0.22
MRPS28-202ENST00000518271 KIAA1551Q9HCM1 1747 aa16.45■□□□□ 0.22
MRPS28-202ENST00000518271 CNTNAP4Q9C0A0 1308 aa16.45■□□□□ 0.22
MRPS28-202ENST00000518271 SSFA2P28290 1259 aa16.44■□□□□ 0.22
MRPS28-202ENST00000518271 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
MRPS28-202ENST00000518271 PHACTR3Q96KR7 559 aa16.44■□□□□ 0.22
MRPS28-202ENST00000518271 CFAP53Q96M91 514 aa16.44■□□□□ 0.22
MRPS28-202ENST00000518271 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
MRPS28-202ENST00000518271 GNPATO15228 680 aa16.43■□□□□ 0.22
MRPS28-202ENST00000518271 MSH5O43196 834 aa16.43■□□□□ 0.22
MRPS28-202ENST00000518271 PHF14O94880 888 aa16.43■□□□□ 0.22
MRPS28-202ENST00000518271 HMGB2P26583 209 aaKnown RBP16.43■□□□□ 0.22
MRPS28-202ENST00000518271 PRKAR2BP31323 418 aa16.43■□□□□ 0.22
MRPS28-202ENST00000518271 CEMIPQ8WUJ3 1361 aa16.42■□□□□ 0.22
MRPS28-202ENST00000518271 PTCD1O75127 700 aaKnown RBP16.42■□□□□ 0.22
MRPS28-202ENST00000518271 POLD1P28340 1107 aa16.42■□□□□ 0.22
MRPS28-202ENST00000518271 SLC39A6Q13433 755 aa16.41■□□□□ 0.22
MRPS28-202ENST00000518271 RC3H1Q5TC82 1133 aaKnown RBP16.41■□□□□ 0.22
MRPS28-202ENST00000518271 IL17REQ8NFR9 667 aa16.41■□□□□ 0.22
MRPS28-202ENST00000518271 NLGN2Q8NFZ4 835 aa16.4■□□□□ 0.22
MRPS28-202ENST00000518271 GAS2L2Q8NHY3 880 aa16.4■□□□□ 0.22
MRPS28-202ENST00000518271 U2AF1L5P0DN76 240 aaPredicted RBP16.39■□□□□ 0.21
MRPS28-202ENST00000518271 U2AF1Q01081 240 aaKnown RBP eCLIP16.39■□□□□ 0.21
MRPS28-202ENST00000518271 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
MRPS28-202ENST00000518271 CRKLP46109 303 aaKnown RBP16.38■□□□□ 0.21
MRPS28-202ENST00000518271 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
MRPS28-202ENST00000518271 NUDCQ9Y266 331 aa16.38■□□□□ 0.21
MRPS28-202ENST00000518271 KDM3BQ7LBC6 1761 aa16.37■□□□□ 0.21
MRPS28-202ENST00000518271 RPS6KA4O75676 772 aa16.37■□□□□ 0.21
MRPS28-202ENST00000518271 DNAJC10Q8IXB1 793 aa16.37■□□□□ 0.21
MRPS28-202ENST00000518271 RTCBQ9Y3I0 505 aaKnown RBP16.37■□□□□ 0.21
MRPS28-202ENST00000518271 BRCA1P38398 1863 aaKnown RBP16.37■□□□□ 0.21
MRPS28-202ENST00000518271 FCHSD2O94868 740 aa16.36■□□□□ 0.21
MRPS28-202ENST00000518271 INTS5Q6P9B9 1019 aaKnown RBP16.36■□□□□ 0.21
MRPS28-202ENST00000518271 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
MRPS28-202ENST00000518271 ARHGEF1Q92888 912 aaKnown RBP16.36■□□□□ 0.21
MRPS28-202ENST00000518271 N4BP2Q86UW6 1770 aaPredicted RBP16.36■□□□□ 0.21
MRPS28-202ENST00000518271 AFDNP55196 1824 aaKnown RBP16.35■□□□□ 0.21
MRPS28-202ENST00000518271 SCN7AQ01118 1682 aa16.35■□□□□ 0.21
MRPS28-202ENST00000518271 ADRA2BP18089 450 aa16.35■□□□□ 0.21
MRPS28-202ENST00000518271 LAMB4A4D0S4 1761 aa16.34■□□□□ 0.21
MRPS28-202ENST00000518271 CYP19A1P11511 503 aaPredicted RBP16.34■□□□□ 0.21
MRPS28-202ENST00000518271 GYS1P13807 737 aa16.33■□□□□ 0.2
MRPS28-202ENST00000518271 RALBP1Q15311 655 aa16.33■□□□□ 0.2
MRPS28-202ENST00000518271 TRAPPC3LQ5T215 181 aa16.33■□□□□ 0.2
MRPS28-202ENST00000518271 PLEKHF1Q96S99 279 aa16.33■□□□□ 0.2
MRPS28-202ENST00000518271 SOS1Q07889 1333 aaPredicted RBP16.33■□□□□ 0.2
MRPS28-202ENST00000518271 C10orf71Q711Q0 1435 aa16.33■□□□□ 0.2
MRPS28-202ENST00000518271 NRXN2Q9P2S2 1712 aa16.33■□□□□ 0.2
MRPS28-202ENST00000518271 BCORQ6W2J9 1755 aa16.33■□□□□ 0.2
MRPS28-202ENST00000518271 KCNQ3O43525 872 aa16.32■□□□□ 0.2
MRPS28-202ENST00000518271 TEFQ10587 303 aa16.32■□□□□ 0.2
MRPS28-202ENST00000518271 VSIG10Q8N0Z9 540 aa16.32■□□□□ 0.2
MRPS28-202ENST00000518271 ZNF496Q96IT1 587 aaPredicted RBP16.32■□□□□ 0.2
MRPS28-202ENST00000518271 USP42Q9H9J4 1324 aaKnown RBP16.32■□□□□ 0.2
MRPS28-202ENST00000518271 CCDC87Q9NVE4 849 aa16.32■□□□□ 0.2
MRPS28-202ENST00000518271 HEG1Q9ULI3 1381 aa16.32■□□□□ 0.2
MRPS28-202ENST00000518271 ZBTB1Q9Y2K1 713 aa16.32■□□□□ 0.2
MRPS28-202ENST00000518271 CD2APQ9Y5K6 639 aa16.32■□□□□ 0.2
MRPS28-202ENST00000518271 MMP10P09238 476 aa16.31■□□□□ 0.2
MRPS28-202ENST00000518271 ZNF790Q6PG37 636 aa16.31■□□□□ 0.2
MRPS28-202ENST00000518271 MCM10Q7L590 875 aa16.31■□□□□ 0.2
MRPS28-202ENST00000518271 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
MRPS28-202ENST00000518271 PXDNLA1KZ92 1463 aa16.3■□□□□ 0.2
MRPS28-202ENST00000518271 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
MRPS28-202ENST00000518271 DCTN1Q14203 1278 aa16.3■□□□□ 0.2
MRPS28-202ENST00000518271 COL15A1P39059 1388 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms