RNA–Protein interactions for RNA: ENST00000515483.5

TNPO1-210, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-210ENST00000515483 HSP90AB2PQ58FF8 381 aa20.9■□□□□ 0.94
TNPO1-210ENST00000515483 TRAPPC3LQ5T215 181 aa20.9■□□□□ 0.94
TNPO1-210ENST00000515483 TMOD3Q9NYL9 352 aa20.9■□□□□ 0.94
TNPO1-210ENST00000515483 C10orf71Q711Q0 1435 aa20.89■□□□□ 0.94
TNPO1-210ENST00000515483 ITPK1Q13572 414 aa20.89■□□□□ 0.93
TNPO1-210ENST00000515483 SPG7Q9UQ90 795 aa20.89■□□□□ 0.93
TNPO1-210ENST00000515483 RTCBQ9Y3I0 505 aaKnown RBP20.89■□□□□ 0.93
TNPO1-210ENST00000515483 SLC24A1O60721 1099 aa20.88■□□□□ 0.93
TNPO1-210ENST00000515483 SMC1BQ8NDV3 1235 aa20.88■□□□□ 0.93
TNPO1-210ENST00000515483 FYB1O15117 783 aa20.87■□□□□ 0.93
TNPO1-210ENST00000515483 RRAGCQ9HB90 399 aa20.87■□□□□ 0.93
TNPO1-210ENST00000515483 ASAP1Q9ULH1 1129 aa20.87■□□□□ 0.93
TNPO1-210ENST00000515483 PARP3Q9Y6F1 533 aa20.87■□□□□ 0.93
TNPO1-210ENST00000515483 KIF13BQ9NQT8 1826 aa20.87■□□□□ 0.93
TNPO1-210ENST00000515483 PCNTO95613 3336 aa20.86■□□□□ 0.93
TNPO1-210ENST00000515483 FLT4P35916 1363 aa20.86■□□□□ 0.93
TNPO1-210ENST00000515483 KIF24Q5T7B8 1368 aa20.86■□□□□ 0.93
TNPO1-210ENST00000515483 GGNBP2Q9H3C7 697 aa20.86■□□□□ 0.93
TNPO1-210ENST00000515483 PIM2Q9P1W9 311 aa20.86■□□□□ 0.93
TNPO1-210ENST00000515483 ITGB4P16144 1822 aa20.85■□□□□ 0.93
TNPO1-210ENST00000515483 ADRA2BP18089 450 aa20.85■□□□□ 0.93
TNPO1-210ENST00000515483 RNF181Q9P0P0 153 aa20.85■□□□□ 0.93
TNPO1-210ENST00000515483 N4BP2Q86UW6 1770 aaPredicted RBP20.85■□□□□ 0.93
TNPO1-210ENST00000515483 KCPQ6ZWJ8 1503 aa20.84■□□□□ 0.93
TNPO1-210ENST00000515483 MAP2P11137 1827 aaKnown RBP20.84■□□□□ 0.93
TNPO1-210ENST00000515483 KIAA1551Q9HCM1 1747 aa20.84■□□□□ 0.93
TNPO1-210ENST00000515483 HSPA1AP0DMV8 641 aaKnown RBP20.83■□□□□ 0.93
TNPO1-210ENST00000515483 HSPA1BP0DMV9 641 aaKnown RBP20.83■□□□□ 0.93
TNPO1-210ENST00000515483 KCNA3P22001 575 aa20.83■□□□□ 0.93
TNPO1-210ENST00000515483 RFC4P35249 363 aa20.83■□□□□ 0.93
TNPO1-210ENST00000515483 DALRD3Q5D0E6 543 aaKnown RBP20.83■□□□□ 0.93
TNPO1-210ENST00000515483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.83■□□□□ 0.932e-8■■□□□ 11.7
TNPO1-210ENST00000515483 ARHGEF1Q92888 912 aaKnown RBP20.82■□□□□ 0.92
TNPO1-210ENST00000515483 DCAF5Q96JK2 942 aa20.82■□□□□ 0.92
TNPO1-210ENST00000515483 ATG3Q9NT62 314 aa20.82■□□□□ 0.92
TNPO1-210ENST00000515483 GYS1P13807 737 aa20.81■□□□□ 0.92
TNPO1-210ENST00000515483 RC3H1Q5TC82 1133 aaKnown RBP20.81■□□□□ 0.92
TNPO1-210ENST00000515483 TESK2Q96S53 571 aa20.8■□□□□ 0.92
TNPO1-210ENST00000515483 IFNL2Q8IZJ0 200 aa20.79■□□□□ 0.92
TNPO1-210ENST00000515483 PKD1L3Q7Z443 1732 aa20.78■□□□□ 0.92
TNPO1-210ENST00000515483 ZC3H4Q9UPT8 1303 aaKnown RBP20.78■□□□□ 0.92
TNPO1-210ENST00000515483 RPS6KA4O75676 772 aa20.77■□□□□ 0.92
TNPO1-210ENST00000515483 RBM42Q9BTD8 480 aaKnown RBP20.77■□□□□ 0.92
TNPO1-210ENST00000515483 C4AP0C0L4 1744 aa20.77■□□□□ 0.92
TNPO1-210ENST00000515483 ST20-MTHFSA0A0A6YYL1 179 aa20.76■□□□□ 0.91
TNPO1-210ENST00000515483 VEGFAP15692 232 aaPredicted RBP20.76■□□□□ 0.91
TNPO1-210ENST00000515483 PHKG2P15735 406 aa20.76■□□□□ 0.91
TNPO1-210ENST00000515483 NCAPD2Q15021 1401 aa20.76■□□□□ 0.91
TNPO1-210ENST00000515483 CNTNAP4Q9C0A0 1308 aa20.76■□□□□ 0.91
TNPO1-210ENST00000515483 ARFGEF1Q9Y6D6 1849 aa20.75■□□□□ 0.91
TNPO1-210ENST00000515483 KDRP35968 1356 aa20.74■□□□□ 0.91
TNPO1-210ENST00000515483 TONSLQ96HA7 1378 aa20.74■□□□□ 0.91
TNPO1-210ENST00000515483 TNRC6CQ9HCJ0 1690 aaKnown RBP20.74■□□□□ 0.91
TNPO1-210ENST00000515483 BRCA1P38398 1863 aaKnown RBP20.74■□□□□ 0.91
TNPO1-210ENST00000515483 EMILIN1Q9Y6C2 1016 aa20.74■□□□□ 0.91
TNPO1-210ENST00000515483 PPM1GO15355 546 aaPredicted RBP20.73■□□□□ 0.91
TNPO1-210ENST00000515483 SLC4A9Q96Q91 983 aa20.73■□□□□ 0.91
TNPO1-210ENST00000515483 GLTPD2A6NH11 291 aa20.72■□□□□ 0.91
TNPO1-210ENST00000515483 ERVV-2B6SEH9 535 aa20.72■□□□□ 0.91
TNPO1-210ENST00000515483 EYA1Q99502 592 aa20.71■□□□□ 0.91
TNPO1-210ENST00000515483 CHRNA5P30532 468 aa20.7■□□□□ 0.9
TNPO1-210ENST00000515483 LMNB1P20700 586 aa20.69■□□□□ 0.9
TNPO1-210ENST00000515483 WASHC2AQ641Q2 1341 aa20.69■□□□□ 0.9
TNPO1-210ENST00000515483 HSP90AB1P08238 724 aaKnown RBP20.68■□□□□ 0.9
TNPO1-210ENST00000515483 FKBP8Q14318 412 aa20.68■□□□□ 0.9
TNPO1-210ENST00000515483 SLC34A2O95436 690 aa20.67■□□□□ 0.9
TNPO1-210ENST00000515483 DDR1Q08345 913 aa20.67■□□□□ 0.9
TNPO1-210ENST00000515483 USP42Q9H9J4 1324 aaKnown RBP20.67■□□□□ 0.9
TNPO1-210ENST00000515483 RASSF7Q02833 373 aa20.66■□□□□ 0.9
TNPO1-210ENST00000515483 SRP68Q9UHB9 627 aaKnown RBP20.66■□□□□ 0.9
TNPO1-210ENST00000515483 ZNF831Q5JPB2 1677 aa20.66■□□□□ 0.9
TNPO1-210ENST00000515483 KDM6AO15550 1401 aaPredicted RBP20.65■□□□□ 0.9
TNPO1-210ENST00000515483 CRKLP46109 303 aaKnown RBP20.64■□□□□ 0.89
TNPO1-210ENST00000515483 SBF1O95248 1867 aa20.64■□□□□ 0.89
TNPO1-210ENST00000515483 POLRMTO00411 1230 aaKnown RBP20.63■□□□□ 0.89
TNPO1-210ENST00000515483 TM4SF1P30408 202 aa20.63■□□□□ 0.89
TNPO1-210ENST00000515483 CABP4P57796 275 aa20.63■□□□□ 0.89
TNPO1-210ENST00000515483 CDCA8Q53HL2 280 aa20.63■□□□□ 0.89
TNPO1-210ENST00000515483 DPY19L2Q6NUT2 758 aa20.63■□□□□ 0.89
TNPO1-210ENST00000515483 PTCD1O75127 700 aaKnown RBP20.62■□□□□ 0.89
TNPO1-210ENST00000515483 CREBZFQ9NS37 354 aa20.62■□□□□ 0.89
TNPO1-210ENST00000515483 ZPR1O75312 459 aa20.61■□□□□ 0.89
TNPO1-210ENST00000515483 PRDM10Q9NQV6 1147 aa20.61■□□□□ 0.89
TNPO1-210ENST00000515483 COL5A3P25940 1745 aaPredicted RBP20.61■□□□□ 0.89
TNPO1-210ENST00000515483 KIF20BQ96Q89 1820 aa20.6■□□□□ 0.89
TNPO1-210ENST00000515483 TTLL6Q8N841 843 aa20.6■□□□□ 0.89
TNPO1-210ENST00000515483 PLEKHO1Q53GL0 409 aaPredicted RBP20.59■□□□□ 0.89
TNPO1-210ENST00000515483 CARD14Q9BXL6 1004 aa20.59■□□□□ 0.89
TNPO1-210ENST00000515483 MKRN1Q9UHC7 482 aaKnown RBP20.59■□□□□ 0.89
TNPO1-210ENST00000515483 MYH14Q7Z406 1995 aaKnown RBP20.58■□□□□ 0.89
TNPO1-210ENST00000515483 POTECB2RU33 542 aa20.58■□□□□ 0.89
TNPO1-210ENST00000515483 FOXN1O15353 648 aa20.57■□□□□ 0.88
TNPO1-210ENST00000515483 EIF4A2Q14240 407 aaKnown RBP20.57■□□□□ 0.88
TNPO1-210ENST00000515483 POLKQ9UBT6 870 aa20.57■□□□□ 0.88
TNPO1-210ENST00000515483 USPL1Q5W0Q7 1092 aa20.56■□□□□ 0.88
TNPO1-210ENST00000515483 CHADLQ6NUI6 762 aa20.56■□□□□ 0.88
TNPO1-210ENST00000515483 ZNF530Q6P9A1 599 aaPredicted RBP20.56■□□□□ 0.88
TNPO1-210ENST00000515483 AIDAQ96BJ3 306 aa20.56■□□□□ 0.88
TNPO1-210ENST00000515483 CTCFP49711 727 aaPredicted RBP20.55■□□□□ 0.88
TNPO1-210ENST00000515483 MTHFSP49914 203 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms