RNA–Protein interactions for RNA: ENST00000515410.1

RAB3A-204, Transcript of RAB3A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB3A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-204ENST00000515410 TATP17735 454 aaPredicted RBP18.53■□□□□ 0.56
RAB3A-204ENST00000515410 HTRA3P83110 453 aa18.53■□□□□ 0.56
RAB3A-204ENST00000515410 UBR3Q6ZT12 1888 aa18.53■□□□□ 0.56
RAB3A-204ENST00000515410 USHBP1Q8N6Y0 703 aa18.53■□□□□ 0.56
RAB3A-204ENST00000515410 PPM1GO15355 546 aaPredicted RBP18.52■□□□□ 0.56
RAB3A-204ENST00000515410 TGFB2P61812 414 aa18.52■□□□□ 0.56
RAB3A-204ENST00000515410 FSTL1Q12841 308 aa18.52■□□□□ 0.56
RAB3A-204ENST00000515410 BCS1LQ9Y276 419 aa18.52■□□□□ 0.56
RAB3A-204ENST00000515410 KIF7Q2M1P5 1343 aa18.51■□□□□ 0.55
RAB3A-204ENST00000515410 NCAPD2Q15021 1401 aa18.51■□□□□ 0.55
RAB3A-204ENST00000515410 MMP10P09238 476 aa18.51■□□□□ 0.55
RAB3A-204ENST00000515410 C16orf71Q8IYS4 520 aaPredicted RBP18.51■□□□□ 0.55
RAB3A-204ENST00000515410 CYP27B1O15528 508 aa18.5■□□□□ 0.55
RAB3A-204ENST00000515410 ARHGAP27Q6ZUM4 889 aa18.5■□□□□ 0.55
RAB3A-204ENST00000515410 KNSTRNQ9Y448 316 aa18.5■□□□□ 0.55
RAB3A-204ENST00000515410 PCNTO95613 3336 aa18.49■□□□□ 0.55
RAB3A-204ENST00000515410 LINC00116Q8NCU8 138 aa18.49■□□□□ 0.55
RAB3A-204ENST00000515410 PIGBQ92521 554 aa18.49■□□□□ 0.55
RAB3A-204ENST00000515410 PLEKHG2Q9H7P9 1386 aa18.49■□□□□ 0.55
RAB3A-204ENST00000515410 LOC102724428A0A0B4J2F2 783 aa18.48■□□□□ 0.55
RAB3A-204ENST00000515410 A0A0G2JLW4 131 aa18.48■□□□□ 0.55
RAB3A-204ENST00000515410 GNPATO15228 680 aa18.48■□□□□ 0.55
RAB3A-204ENST00000515410 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
RAB3A-204ENST00000515410 SIK1P57059 783 aa18.48■□□□□ 0.55
RAB3A-204ENST00000515410 EYA1Q99502 592 aa18.48■□□□□ 0.55
RAB3A-204ENST00000515410 KIAA1551Q9HCM1 1747 aa18.48■□□□□ 0.55
RAB3A-204ENST00000515410 MORC1Q86VD1 984 aa18.47■□□□□ 0.55
RAB3A-204ENST00000515410 C10orf71Q711Q0 1435 aa18.47■□□□□ 0.55
RAB3A-204ENST00000515410 KIF13BQ9NQT8 1826 aa18.46■□□□□ 0.55
RAB3A-204ENST00000515410 PER1O15534 1290 aaPredicted RBP18.46■□□□□ 0.55
RAB3A-204ENST00000515410 AMER1Q5JTC6 1135 aaPredicted RBP18.46■□□□□ 0.55
RAB3A-204ENST00000515410 C9orf131Q5VYM1 1079 aa18.46■□□□□ 0.55
RAB3A-204ENST00000515410 FCHSD2O94868 740 aa18.45■□□□□ 0.54
RAB3A-204ENST00000515410 EIF4A2Q14240 407 aaKnown RBP18.45■□□□□ 0.54
RAB3A-204ENST00000515410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.54
RAB3A-204ENST00000515410 KDM2BQ8NHM5 1336 aa18.45■□□□□ 0.54
RAB3A-204ENST00000515410 DPEP1P16444 411 aa18.44■□□□□ 0.54
RAB3A-204ENST00000515410 PKD1L3Q7Z443 1732 aa18.43■□□□□ 0.54
RAB3A-204ENST00000515410 ITPK1Q13572 414 aa18.43■□□□□ 0.54
RAB3A-204ENST00000515410 NKX1-1Q15270 411 aaPredicted RBP18.43■□□□□ 0.54
RAB3A-204ENST00000515410 NLGN1Q8N2Q7 840 aa18.43■□□□□ 0.54
RAB3A-204ENST00000515410 SPG7Q9UQ90 795 aa18.43■□□□□ 0.54
RAB3A-204ENST00000515410 N4BP2Q86UW6 1770 aaPredicted RBP18.42■□□□□ 0.54
RAB3A-204ENST00000515410 ITGB4P16144 1822 aa18.42■□□□□ 0.54
RAB3A-204ENST00000515410 CCDC87Q9NVE4 849 aa18.42■□□□□ 0.54
RAB3A-204ENST00000515410 KCPQ6ZWJ8 1503 aa18.42■□□□□ 0.54
RAB3A-204ENST00000515410 ATP6V1AP38606 617 aa18.41■□□□□ 0.54
RAB3A-204ENST00000515410 SMC1BQ8NDV3 1235 aa18.4■□□□□ 0.54
RAB3A-204ENST00000515410 TMOD3Q9NYL9 352 aa18.4■□□□□ 0.54
RAB3A-204ENST00000515410 ASAP1Q9ULH1 1129 aa18.4■□□□□ 0.54
RAB3A-204ENST00000515410 TRAPPC3LQ5T215 181 aa18.39■□□□□ 0.53
RAB3A-204ENST00000515410 RRAGCQ9HB90 399 aa18.39■□□□□ 0.53
RAB3A-204ENST00000515410 HSPA1AP0DMV8 641 aaKnown RBP18.38■□□□□ 0.53
RAB3A-204ENST00000515410 HSPA1BP0DMV9 641 aaKnown RBP18.38■□□□□ 0.53
RAB3A-204ENST00000515410 KCNA3P22001 575 aa18.38■□□□□ 0.53
RAB3A-204ENST00000515410 RNF181Q9P0P0 153 aa18.38■□□□□ 0.53
RAB3A-204ENST00000515410 RTCBQ9Y3I0 505 aaKnown RBP18.38■□□□□ 0.53
RAB3A-204ENST00000515410 DCAF5Q96JK2 942 aa18.37■□□□□ 0.53
RAB3A-204ENST00000515410 PIM2Q9P1W9 311 aa18.37■□□□□ 0.53
RAB3A-204ENST00000515410 NPC1L1Q9UHC9 1359 aa18.37■□□□□ 0.53
RAB3A-204ENST00000515410 C4AP0C0L4 1744 aa18.37■□□□□ 0.53
RAB3A-204ENST00000515410 ADRA2BP18089 450 aa18.36■□□□□ 0.53
RAB3A-204ENST00000515410 BRCA1P38398 1863 aaKnown RBP18.36■□□□□ 0.53
RAB3A-204ENST00000515410 IFNL2Q8IZJ0 200 aa18.36■□□□□ 0.53
RAB3A-204ENST00000515410 PARP3Q9Y6F1 533 aa18.36■□□□□ 0.53
RAB3A-204ENST00000515410 TNRC6CQ9HCJ0 1690 aaKnown RBP18.35■□□□□ 0.53
RAB3A-204ENST00000515410 GYS1P13807 737 aa18.35■□□□□ 0.53
RAB3A-204ENST00000515410 PHKG2P15735 406 aa18.35■□□□□ 0.53
RAB3A-204ENST00000515410 IL13P35225 146 aa18.35■□□□□ 0.53
RAB3A-204ENST00000515410 DALRD3Q5D0E6 543 aaKnown RBP18.35■□□□□ 0.53
RAB3A-204ENST00000515410 ARHGEF1Q92888 912 aaKnown RBP18.35■□□□□ 0.53
RAB3A-204ENST00000515410 KDRP35968 1356 aa18.34■□□□□ 0.53
RAB3A-204ENST00000515410 ATG3Q9NT62 314 aa18.34■□□□□ 0.53
RAB3A-204ENST00000515410 ARFGEF1Q9Y6D6 1849 aa18.34■□□□□ 0.53
RAB3A-204ENST00000515410 MTHFSP49914 203 aa18.33■□□□□ 0.52
RAB3A-204ENST00000515410 AMOTQ4VCS5 1084 aa18.33■□□□□ 0.52
RAB3A-204ENST00000515410 RFC4P35249 363 aa18.32■□□□□ 0.52
RAB3A-204ENST00000515410 PLEKHO1Q53GL0 409 aaPredicted RBP18.32■□□□□ 0.52
RAB3A-204ENST00000515410 CC2D1BQ5T0F9 858 aaKnown RBP18.32■□□□□ 0.52
RAB3A-204ENST00000515410 RC3H1Q5TC82 1133 aaKnown RBP18.32■□□□□ 0.52
RAB3A-204ENST00000515410 ZC3H4Q9UPT8 1303 aaKnown RBP18.31■□□□□ 0.52
RAB3A-204ENST00000515410 CNTNAP4Q9C0A0 1308 aa18.3■□□□□ 0.52
RAB3A-204ENST00000515410 RPS6KA4O75676 772 aa18.3■□□□□ 0.52
RAB3A-204ENST00000515410 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
RAB3A-204ENST00000515410 SULT6B1Q6IMI4 303 aa18.3■□□□□ 0.52
RAB3A-204ENST00000515410 SLC4A9Q96Q91 983 aa18.3■□□□□ 0.52
RAB3A-204ENST00000515410 SLC34A2O95436 690 aa18.29■□□□□ 0.52
RAB3A-204ENST00000515410 ERVV-2B6SEH9 535 aa18.28■□□□□ 0.52
RAB3A-204ENST00000515410 VEGFAP15692 232 aaPredicted RBP18.28■□□□□ 0.52
RAB3A-204ENST00000515410 AEBP1Q8IUX7 1158 aa18.28■□□□□ 0.52
RAB3A-204ENST00000515410 ZNF831Q5JPB2 1677 aa18.28■□□□□ 0.52
RAB3A-204ENST00000515410 KDM6AO15550 1401 aaPredicted RBP18.27■□□□□ 0.52
RAB3A-204ENST00000515410 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
RAB3A-204ENST00000515410 CHRNA5P30532 468 aa18.26■□□□□ 0.51
RAB3A-204ENST00000515410 GLTPD2A6NH11 291 aa18.25■□□□□ 0.51
RAB3A-204ENST00000515410 DIAPH1O60610 1272 aaKnown RBP18.25■□□□□ 0.51
RAB3A-204ENST00000515410 DDR1Q08345 913 aa18.25■□□□□ 0.51
RAB3A-204ENST00000515410 ZNF530Q6P9A1 599 aaPredicted RBP18.25■□□□□ 0.51
RAB3A-204ENST00000515410 COL5A3P25940 1745 aaPredicted RBP18.23■□□□□ 0.51
RAB3A-204ENST00000515410 LMNB1P20700 586 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms