RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 ZSCAN10Q96SZ4 725 aaPredicted RBP9.82□□□□□ -0.84
NEDD4-211ENST00000514893 NDUFB9Q9Y6M9 179 aa9.82□□□□□ -0.84
NEDD4-211ENST00000514893 CSB-PGBD3P0DP91 1061 aa9.81□□□□□ -0.84
NEDD4-211ENST00000514893 NEUROD2Q15784 382 aa9.81□□□□□ -0.84
NEDD4-211ENST00000514893 ALYREFQ86V81 257 aaKnown RBP9.81□□□□□ -0.84
NEDD4-211ENST00000514893 PGBD3Q8N328 593 aa9.81□□□□□ -0.84
NEDD4-211ENST00000514893 GALNT6Q8NCL4 622 aa9.81□□□□□ -0.84
NEDD4-211ENST00000514893 XAGE2Q96GT9 111 aa9.81□□□□□ -0.84
NEDD4-211ENST00000514893 GDF2Q9UK05 429 aaPredicted RBP9.81□□□□□ -0.84
NEDD4-211ENST00000514893 ADAM23O75077 832 aa9.8□□□□□ -0.84
NEDD4-211ENST00000514893 ESCO1Q5FWF5 840 aa9.8□□□□□ -0.84
NEDD4-211ENST00000514893 TMEM214Q6NUQ4 689 aaKnown RBP9.8□□□□□ -0.84
NEDD4-211ENST00000514893 KLRG1Q96E93 195 aa9.8□□□□□ -0.84
NEDD4-211ENST00000514893 RAB6BQ9NRW1 208 aa9.8□□□□□ -0.84
NEDD4-211ENST00000514893 CEP126Q9P2H0 1117 aa9.8□□□□□ -0.84
NEDD4-211ENST00000514893 MKL2Q9ULH7 1088 aa9.8□□□□□ -0.84
NEDD4-211ENST00000514893 IL2RAP01589 272 aa9.79□□□□□ -0.84
NEDD4-211ENST00000514893 PHKA2P46019 1235 aa9.79□□□□□ -0.84
NEDD4-211ENST00000514893 GPAMQ9HCL2 828 aa9.79□□□□□ -0.84
NEDD4-211ENST00000514893 ITGB2P05107 769 aa9.77□□□□□ -0.85
NEDD4-211ENST00000514893 USP4Q13107 963 aa9.77□□□□□ -0.85
NEDD4-211ENST00000514893 EFHC2Q5JST6 749 aa9.77□□□□□ -0.85
NEDD4-211ENST00000514893 GOLGA6L1Q8N7Z2 621 aa9.77□□□□□ -0.85
NEDD4-211ENST00000514893 EDARADDQ8WWZ3 215 aa9.77□□□□□ -0.85
NEDD4-211ENST00000514893 RRAGCQ9HB90 399 aa9.77□□□□□ -0.85
NEDD4-211ENST00000514893 HRH3Q9Y5N1 445 aa9.77□□□□□ -0.85
NEDD4-211ENST00000514893 SNRPNP63162 240 aaKnown RBP9.76□□□□□ -0.85
NEDD4-211ENST00000514893 PIK3R2O00459 728 aa9.75□□□□□ -0.85
NEDD4-211ENST00000514893 PROCP04070 461 aa9.75□□□□□ -0.85
NEDD4-211ENST00000514893 MTMR14Q8NCE2 650 aa9.75□□□□□ -0.85
NEDD4-211ENST00000514893 ATXN7L1Q9ULK2 861 aaPredicted RBP9.75□□□□□ -0.85
NEDD4-211ENST00000514893 THBS1P07996 1170 aa9.74□□□□□ -0.85
NEDD4-211ENST00000514893 BMP4P12644 408 aa9.74□□□□□ -0.85
NEDD4-211ENST00000514893 MSX1P28360 303 aa9.74□□□□□ -0.85
NEDD4-211ENST00000514893 C4orf17Q53FE4 359 aa9.74□□□□□ -0.85
NEDD4-211ENST00000514893 CCDC85AQ96PX6 553 aaPredicted RBP9.74□□□□□ -0.85
NEDD4-211ENST00000514893 CDCA7Q9BWT1 371 aaPredicted RBP9.74□□□□□ -0.85
NEDD4-211ENST00000514893 FHDC1Q9C0D6 1143 aaPredicted RBP9.74□□□□□ -0.85
NEDD4-211ENST00000514893 PRM3Q9NNZ6 103 aa9.74□□□□□ -0.85
NEDD4-211ENST00000514893 SHISA8B8ZZ34 492 aa9.73□□□□□ -0.85
NEDD4-211ENST00000514893 SIRT1Q96EB6 747 aa9.73□□□□□ -0.85
NEDD4-211ENST00000514893 RUBCNLQ9H714 662 aa9.73□□□□□ -0.85
NEDD4-211ENST00000514893 AMPD1P23109 780 aa9.72□□□□□ -0.85
NEDD4-211ENST00000514893 EIF4G2P78344 907 aaKnown RBP eCLIP9.72□□□□□ -0.85
NEDD4-211ENST00000514893 PPARGC1BQ86YN6 1023 aaKnown RBP9.72□□□□□ -0.85
NEDD4-211ENST00000514893 KRBA1A5PL33 1030 aa9.71□□□□□ -0.86
NEDD4-211ENST00000514893 K7ELQ4 463 aaPredicted RBP9.71□□□□□ -0.86
NEDD4-211ENST00000514893 GPR37L1O60883 481 aa9.71□□□□□ -0.86
NEDD4-211ENST00000514893 UBAP2LQ14157 1087 aaKnown RBP9.71□□□□□ -0.86
NEDD4-211ENST00000514893 C1orf229Q6ZS94 237 aaPredicted RBP9.71□□□□□ -0.86
NEDD4-211ENST00000514893 RHBDD1Q8TEB9 315 aa9.71□□□□□ -0.86
NEDD4-211ENST00000514893 SNRKQ9NRH2 765 aa9.71□□□□□ -0.86
NEDD4-211ENST00000514893 SLFNL1Q499Z3 407 aa9.7□□□□□ -0.86
NEDD4-211ENST00000514893 FIGNL1Q6PIW4 674 aa9.7□□□□□ -0.86
NEDD4-211ENST00000514893 DOLKQ9UPQ8 538 aa9.7□□□□□ -0.86
NEDD4-211ENST00000514893 FGFR3P22607 806 aa9.69□□□□□ -0.86
NEDD4-211ENST00000514893 BAG6P46379 1132 aa9.69□□□□□ -0.86
NEDD4-211ENST00000514893 BNIP3LO60238 219 aa9.68□□□□□ -0.86
NEDD4-211ENST00000514893 LINC00114Q6XXX2 140 aa9.68□□□□□ -0.86
NEDD4-211ENST00000514893 SLCO4C1Q6ZQN7 724 aa9.68□□□□□ -0.86
NEDD4-211ENST00000514893 PHTF2Q8N3S3 785 aa9.68□□□□□ -0.86
NEDD4-211ENST00000514893 ABHD17AQ96GS6 310 aa9.68□□□□□ -0.86
NEDD4-211ENST00000514893 CRISPLD1Q9H336 500 aa9.68□□□□□ -0.86
NEDD4-211ENST00000514893 GGA1Q9UJY5 639 aa9.68□□□□□ -0.86
NEDD4-211ENST00000514893 C2CD2LO14523 706 aa9.67□□□□□ -0.86
NEDD4-211ENST00000514893 CTBSQ01459 385 aa9.67□□□□□ -0.86
NEDD4-211ENST00000514893 TLR1Q15399 786 aa9.67□□□□□ -0.86
NEDD4-211ENST00000514893 TBC1D9Q6ZT07 1266 aa9.67□□□□□ -0.86
NEDD4-211ENST00000514893 C1orf216Q8TAB5 229 aa9.67□□□□□ -0.86
NEDD4-211ENST00000514893 BTBD6Q96KE9 485 aa9.67□□□□□ -0.86
NEDD4-211ENST00000514893 NDFIP2Q9NV92 336 aa9.67□□□□□ -0.86
NEDD4-211ENST00000514893 PCDHGC4Q9Y5F7 938 aa9.67□□□□□ -0.86
NEDD4-211ENST00000514893 GNB5O14775 395 aa9.66□□□□□ -0.86
NEDD4-211ENST00000514893 COL8A1P27658 744 aa9.66□□□□□ -0.86
NEDD4-211ENST00000514893 GRIN2CQ14957 1233 aa9.66□□□□□ -0.86
NEDD4-211ENST00000514893 TSGA10IPQ3SY00 556 aa9.66□□□□□ -0.86
NEDD4-211ENST00000514893 XP32Q5T750 250 aa9.66□□□□□ -0.86
NEDD4-211ENST00000514893 RNF135Q8IUD6 432 aa9.66□□□□□ -0.86
NEDD4-211ENST00000514893 ETNK1Q9HBU6 452 aa9.66□□□□□ -0.86
NEDD4-211ENST00000514893 ARAFP10398 606 aa9.65□□□□□ -0.86
NEDD4-211ENST00000514893 NLRP8Q86W28 1048 aa9.65□□□□□ -0.86
NEDD4-211ENST00000514893 ZCCHC2Q9C0B9 1178 aaKnown RBP9.65□□□□□ -0.86
NEDD4-211ENST00000514893 EPXP11678 715 aa9.64□□□□□ -0.87
NEDD4-211ENST00000514893 NIFKQ9BYG3 293 aaKnown RBP9.64□□□□□ -0.87
NEDD4-211ENST00000514893 NOP53Q9NZM5 478 aaKnown RBP9.64□□□□□ -0.87
NEDD4-211ENST00000514893 OXLD1Q5BKU9 147 aa9.63□□□□□ -0.87
NEDD4-211ENST00000514893 AIDAQ96BJ3 306 aa9.63□□□□□ -0.87
NEDD4-211ENST00000514893 INHAP05111 366 aa9.62□□□□□ -0.87
NEDD4-211ENST00000514893 FURINP09958 794 aa9.62□□□□□ -0.87
NEDD4-211ENST00000514893 PLA2G4AP47712 749 aa9.62□□□□□ -0.87
NEDD4-211ENST00000514893 BRPF1P55201 1214 aaPredicted RBP9.62□□□□□ -0.87
NEDD4-211ENST00000514893 ATXN7O15265 892 aaPredicted RBP9.61□□□□□ -0.87
NEDD4-211ENST00000514893 HOXB4P17483 251 aaPredicted RBP9.61□□□□□ -0.87
NEDD4-211ENST00000514893 MAP7D1Q3KQU3 841 aa9.61□□□□□ -0.87
NEDD4-211ENST00000514893 SUV39H2Q9H5I1 410 aa9.61□□□□□ -0.87
NEDD4-211ENST00000514893 CHIC2Q9UKJ5 165 aa9.61□□□□□ -0.87
NEDD4-211ENST00000514893 NEURL1BA8MQ27 555 aa9.6□□□□□ -0.87
NEDD4-211ENST00000514893 SMTNP53814 917 aa9.6□□□□□ -0.87
NEDD4-211ENST00000514893 GDF10P55107 478 aa9.6□□□□□ -0.87
NEDD4-211ENST00000514893 TBC1D2BQ9UPU7 963 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms