RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 GTPBP3Q969Y2 492 aaKnown RBP5.34□□□□□ -1.55
PDGFC-208ENST00000512711 TRIM52Q96A61 297 aa5.34□□□□□ -1.55
PDGFC-208ENST00000512711 DNMT3AQ9Y6K1 912 aaPredicted RBP5.34□□□□□ -1.55
PDGFC-208ENST00000512711 WASLO00401 505 aaPredicted RBP5.33□□□□□ -1.56
PDGFC-208ENST00000512711 MARSP56192 900 aaKnown RBP5.33□□□□□ -1.56
PDGFC-208ENST00000512711 C4orf17Q53FE4 359 aa5.33□□□□□ -1.56
PDGFC-208ENST00000512711 WDR44Q5JSH3 913 aa5.33□□□□□ -1.56
PDGFC-208ENST00000512711 TAS1R3Q7RTX0 852 aa5.33□□□□□ -1.56
PDGFC-208ENST00000512711 ZSCAN10Q96SZ4 725 aaPredicted RBP5.33□□□□□ -1.56
PDGFC-208ENST00000512711 GPAMQ9HCL2 828 aa5.33□□□□□ -1.56
PDGFC-208ENST00000512711 PCDHGA11Q9Y5H2 935 aa5.33□□□□□ -1.56
PDGFC-208ENST00000512711 ADAMTS2O95450 1211 aa5.32□□□□□ -1.56
PDGFC-208ENST00000512711 IGHA1P01876 353 aa5.32□□□□□ -1.56
PDGFC-208ENST00000512711 F11P03951 625 aa5.32□□□□□ -1.56
PDGFC-208ENST00000512711 TMEM214Q6NUQ4 689 aaKnown RBP5.32□□□□□ -1.56
PDGFC-208ENST00000512711 SERTAD1Q9UHV2 236 aa5.32□□□□□ -1.56
PDGFC-208ENST00000512711 TMEM229AB2RXF0 380 aa5.31□□□□□ -1.56
PDGFC-208ENST00000512711 INHAP05111 366 aa5.31□□□□□ -1.56
PDGFC-208ENST00000512711 SKIP12755 728 aa5.31□□□□□ -1.56
PDGFC-208ENST00000512711 GDF10P55107 478 aa5.31□□□□□ -1.56
PDGFC-208ENST00000512711 UBAP2LQ14157 1087 aaKnown RBP5.31□□□□□ -1.56
PDGFC-208ENST00000512711 MAP7D1Q3KQU3 841 aa5.31□□□□□ -1.56
PDGFC-208ENST00000512711 HDGFL1Q5TGJ6 251 aa5.31□□□□□ -1.56
PDGFC-208ENST00000512711 KANK3Q6NY19 840 aa5.31□□□□□ -1.56
PDGFC-208ENST00000512711 PPARGC1BQ86YN6 1023 aaKnown RBP5.31□□□□□ -1.56
PDGFC-208ENST00000512711 DEPDC4Q8N2C3 294 aa5.31□□□□□ -1.56
PDGFC-208ENST00000512711 CLUAP1Q96AJ1 413 aa5.31□□□□□ -1.56
PDGFC-208ENST00000512711 USP3Q9Y6I4 520 aa5.31□□□□□ -1.56
PDGFC-208ENST00000512711 MSX1P28360 303 aa5.3□□□□□ -1.56
PDGFC-208ENST00000512711 SRSF11Q05519 484 aaKnown RBP5.3□□□□□ -1.56
PDGFC-208ENST00000512711 TLR1Q15399 786 aa5.3□□□□□ -1.56
PDGFC-208ENST00000512711 ESCO1Q5FWF5 840 aa5.3□□□□□ -1.56
PDGFC-208ENST00000512711 SCARF2Q96GP6 870 aaPredicted RBP5.3□□□□□ -1.56
PDGFC-208ENST00000512711 RUBCNLQ9H714 662 aa5.3□□□□□ -1.56
PDGFC-208ENST00000512711 CELA2BP08218 269 aaPredicted RBP5.29□□□□□ -1.56
PDGFC-208ENST00000512711 UBTFP17480 764 aaKnown RBP5.29□□□□□ -1.56
PDGFC-208ENST00000512711 SOX11P35716 441 aa5.29□□□□□ -1.56
PDGFC-208ENST00000512711 SMTNP53814 917 aa5.29□□□□□ -1.56
PDGFC-208ENST00000512711 FOXK2Q01167 660 aa5.29□□□□□ -1.56
PDGFC-208ENST00000512711 NCOA4Q13772 614 aa5.29□□□□□ -1.56
PDGFC-208ENST00000512711 TMEM132AQ24JP5 1023 aa5.29□□□□□ -1.56
PDGFC-208ENST00000512711 ZNF295-AS1Q8N0V1 137 aa5.29□□□□□ -1.56
PDGFC-208ENST00000512711 SIRT1Q96EB6 747 aa5.29□□□□□ -1.56
PDGFC-208ENST00000512711 GMCL1Q96IK5 515 aa5.29□□□□□ -1.56
PDGFC-208ENST00000512711 NUCKS1Q9H1E3 243 aaKnown RBP5.29□□□□□ -1.56
PDGFC-208ENST00000512711 HCN2Q9UL51 889 aa5.29□□□□□ -1.56
PDGFC-208ENST00000512711 IGF1RP08069 1367 aa5.29□□□□□ -1.56
PDGFC-208ENST00000512711 H7C1W4 665 aa5.28□□□□□ -1.56
PDGFC-208ENST00000512711 ZBTB7BO15156 539 aaPredicted RBP5.28□□□□□ -1.56
PDGFC-208ENST00000512711 RAD21O60216 631 aa5.28□□□□□ -1.56
PDGFC-208ENST00000512711 FLIIQ13045 1269 aa5.28□□□□□ -1.56
PDGFC-208ENST00000512711 GNASQ5JWF2 1037 aa5.28□□□□□ -1.56
PDGFC-208ENST00000512711 TBC1D9Q6ZT07 1266 aa5.28□□□□□ -1.56
PDGFC-208ENST00000512711 FNBP4Q8N3X1 1017 aaPredicted RBP5.28□□□□□ -1.56
PDGFC-208ENST00000512711 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.28□□□□□ -1.56
PDGFC-208ENST00000512711 ACDQ96AP0 544 aa5.28□□□□□ -1.56
PDGFC-208ENST00000512711 SLC4A9Q96Q91 983 aa5.28□□□□□ -1.56
PDGFC-208ENST00000512711 UCN2Q96RP3 112 aa5.28□□□□□ -1.56
PDGFC-208ENST00000512711 MBIPQ9NS73 344 aa5.28□□□□□ -1.56
PDGFC-208ENST00000512711 IQSEC3Q9UPP2 1182 aaPredicted RBP5.28□□□□□ -1.56
PDGFC-208ENST00000512711 PARP3Q9Y6F1 533 aa5.28□□□□□ -1.56
PDGFC-208ENST00000512711 A0A1B0GTH6 734 aa5.27□□□□□ -1.57
PDGFC-208ENST00000512711 C2CD2LO14523 706 aa5.27□□□□□ -1.57
PDGFC-208ENST00000512711 FOXR1Q6PIV2 292 aa5.27□□□□□ -1.57
PDGFC-208ENST00000512711 RHBDD1Q8TEB9 315 aa5.27□□□□□ -1.57
PDGFC-208ENST00000512711 AIDAQ96BJ3 306 aa5.27□□□□□ -1.57
PDGFC-208ENST00000512711 A6NJY4 79 aa5.26□□□□□ -1.57
PDGFC-208ENST00000512711 CDK2AP1O14519 115 aa5.26□□□□□ -1.57
PDGFC-208ENST00000512711 BNIP3LO60238 219 aa5.26□□□□□ -1.57
PDGFC-208ENST00000512711 PLA2G4AP47712 749 aa5.26□□□□□ -1.57
PDGFC-208ENST00000512711 GTF2IP78347 998 aa5.26□□□□□ -1.57
PDGFC-208ENST00000512711 EML3Q32P44 896 aa5.26□□□□□ -1.57
PDGFC-208ENST00000512711 XP32Q5T750 250 aa5.26□□□□□ -1.57
PDGFC-208ENST00000512711 C1orf229Q6ZS94 237 aaPredicted RBP5.26□□□□□ -1.57
PDGFC-208ENST00000512711 KLRG1Q96E93 195 aa5.26□□□□□ -1.57
PDGFC-208ENST00000512711 KIAA1024Q9UPX6 916 aa5.26□□□□□ -1.57
PDGFC-208ENST00000512711 CNTNAP5Q8WYK1 1306 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 USP17L5A8MUK1 530 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 ADAM23O75077 832 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 ITGB2P05107 769 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 MX2P20592 715 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 ATP4AP20648 1035 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 GTF2E1P29083 439 aaPredicted RBP5.25□□□□□ -1.57
PDGFC-208ENST00000512711 CLDN10P78369 228 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 CTBSQ01459 385 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 MAP3K10Q02779 954 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 MTFR1Q15390 333 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 PLA2G4EQ3MJ16 856 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 TBCELQ5QJ74 424 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 TNS4Q8IZW8 715 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 NFATC2IPQ8NCF5 419 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 ABHD17AQ96GS6 310 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 TRERF1Q96PN7 1200 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 CFHR5Q9BXR6 569 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 NIFKQ9BYG3 293 aaKnown RBP5.25□□□□□ -1.57
PDGFC-208ENST00000512711 ZNF358Q9NW07 568 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 NOD1Q9Y239 953 aa5.25□□□□□ -1.57
PDGFC-208ENST00000512711 MSTNO14793 375 aa5.24□□□□□ -1.57
PDGFC-208ENST00000512711 ZDHHC1Q8WTX9 485 aa5.24□□□□□ -1.57
PDGFC-208ENST00000512711 DCAF5Q96JK2 942 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms