RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CELA2BP08218 269 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-211ENST00000508531 MAP3K10Q02779 954 aa8.77□□□□□ -1.01
PDLIM5-211ENST00000508531 SEMA3FQ13275 785 aa8.77□□□□□ -1.01
PDLIM5-211ENST00000508531 GNASQ5JWF2 1037 aa8.77□□□□□ -1.01
PDLIM5-211ENST00000508531 RNF225M0QZC1 329 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-211ENST00000508531 THBS1P07996 1170 aa8.76□□□□□ -1.01
PDLIM5-211ENST00000508531 C4orf17Q53FE4 359 aa8.76□□□□□ -1.01
PDLIM5-211ENST00000508531 PLPP7Q8NBV4 271 aa8.76□□□□□ -1.01
PDLIM5-211ENST00000508531 SIRT1Q96EB6 747 aa8.76□□□□□ -1.01
PDLIM5-211ENST00000508531 COG6Q9Y2V7 657 aa8.76□□□□□ -1.01
PDLIM5-211ENST00000508531 A0A1B0GTH6 734 aa8.75□□□□□ -1.01
PDLIM5-211ENST00000508531 MARSP56192 900 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-211ENST00000508531 RASSF7Q02833 373 aa8.75□□□□□ -1.01
PDLIM5-211ENST00000508531 TLR1Q15399 786 aa8.75□□□□□ -1.01
PDLIM5-211ENST00000508531 KCTD17Q8N5Z5 321 aa8.74□□□□□ -1.01
PDLIM5-211ENST00000508531 GDF11O95390 407 aa8.73□□□□□ -1.01
PDLIM5-211ENST00000508531 MX2P20592 715 aa8.73□□□□□ -1.01
PDLIM5-211ENST00000508531 SOX11P35716 441 aa8.73□□□□□ -1.01
PDLIM5-211ENST00000508531 SCNN1DP51172 638 aa8.73□□□□□ -1.01
PDLIM5-211ENST00000508531 GDF10P55107 478 aa8.73□□□□□ -1.01
PDLIM5-211ENST00000508531 MAP7D1Q3KQU3 841 aa8.73□□□□□ -1.01
PDLIM5-211ENST00000508531 TMEM151AQ8N4L1 468 aa8.73□□□□□ -1.01
PDLIM5-211ENST00000508531 RHBDD1Q8TEB9 315 aa8.73□□□□□ -1.01
PDLIM5-211ENST00000508531 RUBCNLQ9H714 662 aa8.73□□□□□ -1.01
PDLIM5-211ENST00000508531 PIK3CDO00329 1044 aa8.72□□□□□ -1.01
PDLIM5-211ENST00000508531 MSX1P28360 303 aa8.72□□□□□ -1.01
PDLIM5-211ENST00000508531 IRS1P35568 1242 aa8.72□□□□□ -1.01
PDLIM5-211ENST00000508531 PPARGC1BQ86YN6 1023 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-211ENST00000508531 ACDQ96AP0 544 aa8.72□□□□□ -1.01
PDLIM5-211ENST00000508531 POM121Q96HA1 1249 aa8.72□□□□□ -1.01
PDLIM5-211ENST00000508531 INHAP05111 366 aa8.71□□□□□ -1.02
PDLIM5-211ENST00000508531 ENAMQ9NRM1 1142 aa8.71□□□□□ -1.02
PDLIM5-211ENST00000508531 CSB-PGBD3P0DP91 1061 aa8.7□□□□□ -1.02
PDLIM5-211ENST00000508531 BCRP11274 1271 aa8.7□□□□□ -1.02
PDLIM5-211ENST00000508531 PLA2G4AP47712 749 aa8.7□□□□□ -1.02
PDLIM5-211ENST00000508531 PGBD3Q8N328 593 aa8.7□□□□□ -1.02
PDLIM5-211ENST00000508531 SCARF2Q96GP6 870 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-211ENST00000508531 SERTAD1Q9UHV2 236 aa8.7□□□□□ -1.02
PDLIM5-211ENST00000508531 NSFL1CQ9UNZ2 370 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-211ENST00000508531 UBAP2LQ14157 1087 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-211ENST00000508531 CFHR5Q9BXR6 569 aa8.69□□□□□ -1.02
PDLIM5-211ENST00000508531 SKIP12755 728 aa8.68□□□□□ -1.02
PDLIM5-211ENST00000508531 EFHC2Q5JST6 749 aa8.68□□□□□ -1.02
PDLIM5-211ENST00000508531 NEDD1Q8NHV4 660 aa8.68□□□□□ -1.02
PDLIM5-211ENST00000508531 TMEM229AB2RXF0 380 aa8.67□□□□□ -1.02
PDLIM5-211ENST00000508531 SMTNP53814 917 aa8.67□□□□□ -1.02
PDLIM5-211ENST00000508531 LBRQ14739 615 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-211ENST00000508531 TBC1D9Q6ZT07 1266 aa8.67□□□□□ -1.02
PDLIM5-211ENST00000508531 ALG2Q9H553 416 aa8.67□□□□□ -1.02
PDLIM5-211ENST00000508531 PHF24Q9UPV7 400 aa8.67□□□□□ -1.02
PDLIM5-211ENST00000508531 CNTNAP5Q8WYK1 1306 aa8.66□□□□□ -1.02
PDLIM5-211ENST00000508531 MAP2K3P46734 347 aa8.66□□□□□ -1.02
PDLIM5-211ENST00000508531 EML3Q32P44 896 aa8.66□□□□□ -1.02
PDLIM5-211ENST00000508531 KANK3Q6NY19 840 aa8.66□□□□□ -1.02
PDLIM5-211ENST00000508531 WWC1Q8IX03 1113 aa8.66□□□□□ -1.02
PDLIM5-211ENST00000508531 RAD21O60216 631 aa8.65□□□□□ -1.02
PDLIM5-211ENST00000508531 AIDAQ96BJ3 306 aa8.65□□□□□ -1.02
PDLIM5-211ENST00000508531 ABHD17AQ96GS6 310 aa8.65□□□□□ -1.02
PDLIM5-211ENST00000508531 OXCT2Q9BYC2 517 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-211ENST00000508531 NIFKQ9BYG3 293 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-211ENST00000508531 CRISPLD1Q9H336 500 aa8.65□□□□□ -1.02
PDLIM5-211ENST00000508531 PCDHGA11Q9Y5H2 935 aa8.65□□□□□ -1.02
PDLIM5-211ENST00000508531 KLRG1Q96E93 195 aa8.64□□□□□ -1.03
PDLIM5-211ENST00000508531 NOD1Q9Y239 953 aa8.64□□□□□ -1.03
PDLIM5-211ENST00000508531 USP3Q9Y6I4 520 aa8.64□□□□□ -1.03
PDLIM5-211ENST00000508531 A6NJY4 79 aa8.63□□□□□ -1.03
PDLIM5-211ENST00000508531 POM121CA8CG34 1229 aa8.63□□□□□ -1.03
PDLIM5-211ENST00000508531 OIP5O43482 229 aa8.63□□□□□ -1.03
PDLIM5-211ENST00000508531 BNIP3LO60238 219 aa8.63□□□□□ -1.03
PDLIM5-211ENST00000508531 UBTFP17480 764 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-211ENST00000508531 ATP4AP20648 1035 aa8.63□□□□□ -1.03
PDLIM5-211ENST00000508531 GTF2IP78347 998 aa8.63□□□□□ -1.03
PDLIM5-211ENST00000508531 NCOA4Q13772 614 aa8.63□□□□□ -1.03
PDLIM5-211ENST00000508531 SLC4A9Q96Q91 983 aa8.63□□□□□ -1.03
PDLIM5-211ENST00000508531 ATXN7L1Q9ULK2 861 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-211ENST00000508531 DNMT3AQ9Y6K1 912 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-211ENST00000508531 BMP4P12644 408 aa8.62□□□□□ -1.03
PDLIM5-211ENST00000508531 FGFR3P22607 806 aa8.62□□□□□ -1.03
PDLIM5-211ENST00000508531 PSME1Q06323 249 aa8.62□□□□□ -1.03
PDLIM5-211ENST00000508531 MTFR1Q15390 333 aa8.62□□□□□ -1.03
PDLIM5-211ENST00000508531 PODNQ7Z5L7 613 aa8.62□□□□□ -1.03
PDLIM5-211ENST00000508531 DEPDC4Q8N2C3 294 aa8.62□□□□□ -1.03
PDLIM5-211ENST00000508531 NDFIP2Q9NV92 336 aa8.62□□□□□ -1.03
PDLIM5-211ENST00000508531 CABP1Q9NZU7 370 aa8.62□□□□□ -1.03
PDLIM5-211ENST00000508531 IQSEC3Q9UPP2 1182 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-211ENST00000508531 USP17L5A8MUK1 530 aa8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 PHF20L1A8MW92 1017 aa8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 CDK2AP1O14519 115 aa8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 C2CD2LO14523 706 aa8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 CTBSQ01459 385 aa8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 FLIIQ13045 1269 aa8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 C1orf229Q6ZS94 237 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 ZNF295-AS1Q8N0V1 137 aa8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 BEND7Q8N7W2 519 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 NFATC2IPQ8NCF5 419 aa8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 C1orf216Q8TAB5 229 aa8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 ZCCHC2Q9C0B9 1178 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 LRRC4BQ9NT99 713 aa8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 DNAAF2Q9NVR5 837 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-211ENST00000508531 SHISA8B8ZZ34 492 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms