RNA–Protein interactions for RNA: ENST00000507516.3

COL6A4P2-203, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 738 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-203ENST00000507516 WDR90Q96KV7 1748 aa13.22□□□□□ -0.29
COL6A4P2-203ENST00000507516 KDM2BQ8NHM5 1336 aa13.22□□□□□ -0.29
COL6A4P2-203ENST00000507516 TMF1P82094 1093 aa13.22□□□□□ -0.29
COL6A4P2-203ENST00000507516 NKX1-1Q15270 411 aaPredicted RBP13.22□□□□□ -0.29
COL6A4P2-203ENST00000507516 GGNBP2Q9H3C7 697 aa13.22□□□□□ -0.29
COL6A4P2-203ENST00000507516 CCDC87Q9NVE4 849 aa13.22□□□□□ -0.29
COL6A4P2-203ENST00000507516 TMOD3Q9NYL9 352 aa13.22□□□□□ -0.29
COL6A4P2-203ENST00000507516 RGPD2P0DJD1 1756 aa13.22□□□□□ -0.29
COL6A4P2-203ENST00000507516 FLT4P35916 1363 aa13.21□□□□□ -0.29
COL6A4P2-203ENST00000507516 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.29
COL6A4P2-203ENST00000507516 FYB1O15117 783 aa13.21□□□□□ -0.29
COL6A4P2-203ENST00000507516 TRAPPC3LQ5T215 181 aa13.21□□□□□ -0.29
COL6A4P2-203ENST00000507516 ASAP1Q9ULH1 1129 aa13.21□□□□□ -0.29
COL6A4P2-203ENST00000507516 SPG7Q9UQ90 795 aa13.21□□□□□ -0.29
COL6A4P2-203ENST00000507516 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
COL6A4P2-203ENST00000507516 KIF24Q5T7B8 1368 aa13.2□□□□□ -0.3
COL6A4P2-203ENST00000507516 KCPQ6ZWJ8 1503 aa13.19□□□□□ -0.3
COL6A4P2-203ENST00000507516 SMC1BQ8NDV3 1235 aa13.19□□□□□ -0.3
COL6A4P2-203ENST00000507516 RRAGCQ9HB90 399 aa13.19□□□□□ -0.3
COL6A4P2-203ENST00000507516 RNF181Q9P0P0 153 aa13.19□□□□□ -0.3
COL6A4P2-203ENST00000507516 PARP3Q9Y6F1 533 aa13.19□□□□□ -0.3
COL6A4P2-203ENST00000507516 PCNTO95613 3336 aa13.19□□□□□ -0.3
COL6A4P2-203ENST00000507516 TESK2Q96S53 571 aa13.18□□□□□ -0.3
COL6A4P2-203ENST00000507516 PIM2Q9P1W9 311 aa13.18□□□□□ -0.3
COL6A4P2-203ENST00000507516 KIAA1551Q9HCM1 1747 aa13.17□□□□□ -0.3
COL6A4P2-203ENST00000507516 HSPA1AP0DMV8 641 aaKnown RBP13.17□□□□□ -0.3
COL6A4P2-203ENST00000507516 HSPA1BP0DMV9 641 aaKnown RBP13.17□□□□□ -0.3
COL6A4P2-203ENST00000507516 GYS1P13807 737 aa13.17□□□□□ -0.3
COL6A4P2-203ENST00000507516 ADRA2BP18089 450 aa13.17□□□□□ -0.3
COL6A4P2-203ENST00000507516 KCNA3P22001 575 aa13.17□□□□□ -0.3
COL6A4P2-203ENST00000507516 DALRD3Q5D0E6 543 aaKnown RBP13.17□□□□□ -0.3
COL6A4P2-203ENST00000507516 ARHGEF1Q92888 912 aaKnown RBP13.17□□□□□ -0.3
COL6A4P2-203ENST00000507516 DCAF5Q96JK2 942 aa13.17□□□□□ -0.3
COL6A4P2-203ENST00000507516 ATG3Q9NT62 314 aa13.17□□□□□ -0.3
COL6A4P2-203ENST00000507516 ST20-MTHFSA0A0A6YYL1 179 aa13.16□□□□□ -0.3
COL6A4P2-203ENST00000507516 SLC24A1O60721 1099 aa13.16□□□□□ -0.3
COL6A4P2-203ENST00000507516 RFC4P35249 363 aa13.16□□□□□ -0.3
COL6A4P2-203ENST00000507516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL6A4P2-203ENST00000507516 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
COL6A4P2-203ENST00000507516 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
COL6A4P2-203ENST00000507516 PHKG2P15735 406 aa13.15□□□□□ -0.3
COL6A4P2-203ENST00000507516 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
COL6A4P2-203ENST00000507516 IFNL2Q8IZJ0 200 aa13.15□□□□□ -0.3
COL6A4P2-203ENST00000507516 EMILIN1Q9Y6C2 1016 aa13.15□□□□□ -0.3
COL6A4P2-203ENST00000507516 KDRP35968 1356 aa13.15□□□□□ -0.3
COL6A4P2-203ENST00000507516 KIF13BQ9NQT8 1826 aa13.15□□□□□ -0.3
COL6A4P2-203ENST00000507516 RPS6KA4O75676 772 aa13.14□□□□□ -0.31
COL6A4P2-203ENST00000507516 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
COL6A4P2-203ENST00000507516 N4BP2Q86UW6 1770 aaPredicted RBP13.14□□□□□ -0.31
COL6A4P2-203ENST00000507516 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
COL6A4P2-203ENST00000507516 PKD1L3Q7Z443 1732 aa13.13□□□□□ -0.31
COL6A4P2-203ENST00000507516 PPM1GO15355 546 aaPredicted RBP13.13□□□□□ -0.31
COL6A4P2-203ENST00000507516 SLC4A9Q96Q91 983 aa13.13□□□□□ -0.31
COL6A4P2-203ENST00000507516 ITGB4P16144 1822 aa13.13□□□□□ -0.31
COL6A4P2-203ENST00000507516 C4AP0C0L4 1744 aa13.13□□□□□ -0.31
COL6A4P2-203ENST00000507516 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
COL6A4P2-203ENST00000507516 EYA1Q99502 592 aa13.12□□□□□ -0.31
COL6A4P2-203ENST00000507516 ZC3H4Q9UPT8 1303 aaKnown RBP13.12□□□□□ -0.31
COL6A4P2-203ENST00000507516 VEGFAP15692 232 aaPredicted RBP13.11□□□□□ -0.31
COL6A4P2-203ENST00000507516 CHRNA5P30532 468 aa13.11□□□□□ -0.31
COL6A4P2-203ENST00000507516 DDR1Q08345 913 aa13.1□□□□□ -0.31
COL6A4P2-203ENST00000507516 ERVV-2B6SEH9 535 aa13.09□□□□□ -0.31
COL6A4P2-203ENST00000507516 RASSF7Q02833 373 aa13.09□□□□□ -0.31
COL6A4P2-203ENST00000507516 FKBP8Q14318 412 aa13.09□□□□□ -0.31
COL6A4P2-203ENST00000507516 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
COL6A4P2-203ENST00000507516 WASHC2AQ641Q2 1341 aa13.09□□□□□ -0.31
COL6A4P2-203ENST00000507516 GLTPD2A6NH11 291 aa13.08□□□□□ -0.32
COL6A4P2-203ENST00000507516 TNRC6CQ9HCJ0 1690 aaKnown RBP13.08□□□□□ -0.32
COL6A4P2-203ENST00000507516 USP42Q9H9J4 1324 aaKnown RBP13.08□□□□□ -0.32
COL6A4P2-203ENST00000507516 LMNB1P20700 586 aa13.07□□□□□ -0.32
COL6A4P2-203ENST00000507516 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
COL6A4P2-203ENST00000507516 KDM6AO15550 1401 aaPredicted RBP13.06□□□□□ -0.32
COL6A4P2-203ENST00000507516 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
COL6A4P2-203ENST00000507516 ARFGEF1Q9Y6D6 1849 aa13.06□□□□□ -0.32
COL6A4P2-203ENST00000507516 BRCA1P38398 1863 aaKnown RBP13.06□□□□□ -0.32
COL6A4P2-203ENST00000507516 POLRMTO00411 1230 aaKnown RBP13.05□□□□□ -0.32
COL6A4P2-203ENST00000507516 PTCD1O75127 700 aaKnown RBP13.05□□□□□ -0.32
COL6A4P2-203ENST00000507516 CABP4P57796 275 aa13.05□□□□□ -0.32
COL6A4P2-203ENST00000507516 CARD14Q9BXL6 1004 aa13.05□□□□□ -0.32
COL6A4P2-203ENST00000507516 SLC34A2O95436 690 aa13.04□□□□□ -0.32
COL6A4P2-203ENST00000507516 TM4SF1P30408 202 aa13.04□□□□□ -0.32
COL6A4P2-203ENST00000507516 CDCA8Q53HL2 280 aa13.04□□□□□ -0.32
COL6A4P2-203ENST00000507516 ZNF831Q5JPB2 1677 aa13.03□□□□□ -0.32
COL6A4P2-203ENST00000507516 EIF4A2Q14240 407 aaKnown RBP13.03□□□□□ -0.32
COL6A4P2-203ENST00000507516 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
COL6A4P2-203ENST00000507516 POLKQ9UBT6 870 aa13.03□□□□□ -0.32
COL6A4P2-203ENST00000507516 MKRN1Q9UHC7 482 aaKnown RBP13.03□□□□□ -0.32
COL6A4P2-203ENST00000507516 ZPR1O75312 459 aa13.02□□□□□ -0.33
COL6A4P2-203ENST00000507516 PLEKHO1Q53GL0 409 aaPredicted RBP13.02□□□□□ -0.33
COL6A4P2-203ENST00000507516 DPY19L2Q6NUT2 758 aa13.02□□□□□ -0.33
COL6A4P2-203ENST00000507516 ZNF530Q6P9A1 599 aaPredicted RBP13.02□□□□□ -0.33
COL6A4P2-203ENST00000507516 TTLL6Q8N841 843 aa13.02□□□□□ -0.33
COL6A4P2-203ENST00000507516 KIF20BQ96Q89 1820 aa13.02□□□□□ -0.33
COL6A4P2-203ENST00000507516 POTECB2RU33 542 aa13.01□□□□□ -0.33
COL6A4P2-203ENST00000507516 NFKBIEO00221 500 aa13.01□□□□□ -0.33
COL6A4P2-203ENST00000507516 FOXN1O15353 648 aa13.01□□□□□ -0.33
COL6A4P2-203ENST00000507516 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
COL6A4P2-203ENST00000507516 INTS5Q6P9B9 1019 aaKnown RBP13.01□□□□□ -0.33
COL6A4P2-203ENST00000507516 PRDM10Q9NQV6 1147 aa13.01□□□□□ -0.33
COL6A4P2-203ENST00000507516 COL5A3P25940 1745 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms