RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 TAF1LQ8IZX4 1826 aa21.64■■□□□ 1.05
SSBP2-207ENST00000507472 HSP90AB1P08238 724 aaKnown RBP21.63■■□□□ 1.05
SSBP2-207ENST00000507472 ZNF530Q6P9A1 599 aaPredicted RBP21.63■■□□□ 1.05
SSBP2-207ENST00000507472 DCAF5Q96JK2 942 aa21.63■■□□□ 1.05
SSBP2-207ENST00000507472 IL13P35225 146 aa21.62■■□□□ 1.05
SSBP2-207ENST00000507472 SULT6B1Q6IMI4 303 aa21.62■■□□□ 1.05
SSBP2-207ENST00000507472 C4BP0C0L5 1744 aa21.62■■□□□ 1.05
SSBP2-207ENST00000507472 SSFA2P28290 1259 aa21.61■■□□□ 1.05
SSBP2-207ENST00000507472 GNPATO15228 680 aa21.6■■□□□ 1.05
SSBP2-207ENST00000507472 MTHFSP49914 203 aa21.59■■□□□ 1.05
SSBP2-207ENST00000507472 CABP4P57796 275 aa21.59■■□□□ 1.05
SSBP2-207ENST00000507472 SLC4A9Q96Q91 983 aa21.59■■□□□ 1.05
SSBP2-207ENST00000507472 RBM42Q9BTD8 480 aaKnown RBP21.59■■□□□ 1.05
SSBP2-207ENST00000507472 CD2APQ9Y5K6 639 aa21.59■■□□□ 1.05
SSBP2-207ENST00000507472 PER1O15534 1290 aaPredicted RBP21.58■■□□□ 1.05
SSBP2-207ENST00000507472 YBX3P16989 372 aaKnown RBP eCLIP21.58■■□□□ 1.059e-8■■□□□ 11.5
SSBP2-207ENST00000507472 C1orf141Q5JVX7 400 aa21.58■■□□□ 1.05
SSBP2-207ENST00000507472 CHD4Q14839 1912 aa21.57■■□□□ 1.04
SSBP2-207ENST00000507472 KDM6AO15550 1401 aaPredicted RBP21.56■■□□□ 1.04
SSBP2-207ENST00000507472 GRIN3BO60391 1043 aa21.55■■□□□ 1.04
SSBP2-207ENST00000507472 CC2D1BQ5T0F9 858 aaKnown RBP21.55■■□□□ 1.04
SSBP2-207ENST00000507472 NFATC2IPQ8NCF5 419 aa21.55■■□□□ 1.04
SSBP2-207ENST00000507472 KDRP35968 1356 aa21.55■■□□□ 1.04
SSBP2-207ENST00000507472 UBR3Q6ZT12 1888 aa21.55■■□□□ 1.04
SSBP2-207ENST00000507472 TRAPPC3LQ5T215 181 aa21.53■■□□□ 1.04
SSBP2-207ENST00000507472 RTCBQ9Y3I0 505 aaKnown RBP21.53■■□□□ 1.04
SSBP2-207ENST00000507472 PTCD1O75127 700 aaKnown RBP21.52■■□□□ 1.04
SSBP2-207ENST00000507472 RC3H1Q5TC82 1133 aaKnown RBP21.52■■□□□ 1.04
SSBP2-207ENST00000507472 HMOX1P09601 288 aa21.51■■□□□ 1.03
SSBP2-207ENST00000507472 ARHGEF1Q92888 912 aaKnown RBP21.5■■□□□ 1.03
SSBP2-207ENST00000507472 RPS6KA4O75676 772 aa21.49■■□□□ 1.03
SSBP2-207ENST00000507472 MMP10P09238 476 aa21.49■■□□□ 1.03
SSBP2-207ENST00000507472 CNGB1Q14028 1251 aaPredicted RBP21.49■■□□□ 1.03
SSBP2-207ENST00000507472 AKAP4Q5JQC9 854 aa21.49■■□□□ 1.03
SSBP2-207ENST00000507472 CNTNAP4Q9C0A0 1308 aa21.49■■□□□ 1.03
SSBP2-207ENST00000507472 DIAPH1O60610 1272 aaKnown RBP21.48■■□□□ 1.03
SSBP2-207ENST00000507472 LGR6Q9HBX8 967 aa21.48■■□□□ 1.03
SSBP2-207ENST00000507472 ADRA2BP18089 450 aa21.47■■□□□ 1.03
SSBP2-207ENST00000507472 NLGN1Q8N2Q7 840 aa21.47■■□□□ 1.03
SSBP2-207ENST00000507472 RFC4P35249 363 aa21.46■■□□□ 1.03
SSBP2-207ENST00000507472 WWC3Q9ULE0 1092 aa21.46■■□□□ 1.03
SSBP2-207ENST00000507472 CRKLP46109 303 aaKnown RBP21.45■■□□□ 1.02
SSBP2-207ENST00000507472 SLC52A2Q9HAB3 445 aa21.45■■□□□ 1.02
SSBP2-207ENST00000507472 GYS1P13807 737 aa21.44■■□□□ 1.02
SSBP2-207ENST00000507472 MTHFSDQ2M296 383 aaKnown RBP21.44■■□□□ 1.02
SSBP2-207ENST00000507472 ZNF831Q5JPB2 1677 aa21.44■■□□□ 1.02
SSBP2-207ENST00000507472 RNMTO43148 476 aaKnown RBP21.43■■□□□ 1.02
SSBP2-207ENST00000507472 NPC1L1Q9UHC9 1359 aa21.43■■□□□ 1.02
SSBP2-207ENST00000507472 C1QTNF8P60827 252 aa21.41■■□□□ 1.02
SSBP2-207ENST00000507472 SLC39A6Q13433 755 aa21.41■■□□□ 1.02
SSBP2-207ENST00000507472 MYH14Q7Z406 1995 aaKnown RBP21.41■■□□□ 1.02
SSBP2-207ENST00000507472 INTS5Q6P9B9 1019 aaKnown RBP21.4■■□□□ 1.02
SSBP2-207ENST00000507472 U2SURPO15042 1029 aaKnown RBP21.39■■□□□ 1.01
SSBP2-207ENST00000507472 DNAJC10Q8IXB1 793 aa21.39■■□□□ 1.01
SSBP2-207ENST00000507472 SRP68Q9UHB9 627 aaKnown RBP21.39■■□□□ 1.01
SSBP2-207ENST00000507472 COL5A3P25940 1745 aaPredicted RBP21.38■■□□□ 1.01
SSBP2-207ENST00000507472 PARP3Q9Y6F1 533 aa21.38■■□□□ 1.01
SSBP2-207ENST00000507472 SCN11AQ9UI33 1791 aa21.38■■□□□ 1.01
SSBP2-207ENST00000507472 A0A0G2JLW4 131 aa21.37■■□□□ 1.01
SSBP2-207ENST00000507472 GIGYF1O75420 1035 aaPredicted RBP21.37■■□□□ 1.01
SSBP2-207ENST00000507472 TGFB2P61812 414 aa21.37■■□□□ 1.01
SSBP2-207ENST00000507472 FKBP8Q14318 412 aa21.36■■□□□ 1.01
SSBP2-207ENST00000507472 CCDC87Q9NVE4 849 aa21.36■■□□□ 1.01
SSBP2-207ENST00000507472 USP42Q9H9J4 1324 aaKnown RBP21.35■■□□□ 1.01
SSBP2-207ENST00000507472 PXDNLA1KZ92 1463 aa21.34■■□□□ 1.01
SSBP2-207ENST00000507472 COL3A1P02461 1466 aaPredicted RBP21.34■■□□□ 1.01
SSBP2-207ENST00000507472 CICQ96RK0 1608 aaPredicted RBP21.34■■□□□ 1.01
SSBP2-207ENST00000507472 CYP19A1P11511 503 aaPredicted RBP21.34■■□□□ 1.01
SSBP2-207ENST00000507472 ATP10DQ9P241 1426 aa21.33■■□□□ 1.01
SSBP2-207ENST00000507472 DPEP1P16444 411 aa21.33■■□□□ 1.01
SSBP2-207ENST00000507472 IL17REQ8NFR9 667 aa21.33■■□□□ 1.01
SSBP2-207ENST00000507472 MRC1P22897 1456 aa21.32■■□□□ 1
SSBP2-207ENST00000507472 C10orf71Q711Q0 1435 aa21.32■■□□□ 1
SSBP2-207ENST00000507472 SENP3-EIF4A1A0A087X0R7 540 aa21.32■■□□□ 1
SSBP2-207ENST00000507472 BCS1LQ9Y276 419 aa21.32■■□□□ 1
SSBP2-207ENST00000507472 GNAT3A8MTJ3 354 aa21.31■■□□□ 1
SSBP2-207ENST00000507472 ZPR1O75312 459 aa21.31■■□□□ 1
SSBP2-207ENST00000507472 DDR1Q08345 913 aa21.31■■□□□ 1
SSBP2-207ENST00000507472 VSIG10Q8N0Z9 540 aa21.31■■□□□ 1
SSBP2-207ENST00000507472 GAS2L2Q8NHY3 880 aa21.31■■□□□ 1
SSBP2-207ENST00000507472 TJP1Q07157 1748 aa21.31■■□□□ 1
SSBP2-207ENST00000507472 SOS1Q07889 1333 aaPredicted RBP21.3■■□□□ 1
SSBP2-207ENST00000507472 USPL1Q5W0Q7 1092 aa21.3■■□□□ 1
SSBP2-207ENST00000507472 ZNF526Q8TF50 670 aaPredicted RBP21.3■■□□□ 1
SSBP2-207ENST00000507472 CFAP53Q96M91 514 aa21.3■■□□□ 1
SSBP2-207ENST00000507472 GPBP1L1Q9HC44 474 aaPredicted RBP21.3■■□□□ 1
SSBP2-207ENST00000507472 ADCY9O60503 1353 aa21.29■■□□□ 1
SSBP2-207ENST00000507472 KCNA3P22001 575 aa21.29■■□□□ 1
SSBP2-207ENST00000507472 TM4SF1P30408 202 aa21.29■■□□□ 1
SSBP2-207ENST00000507472 TEFQ10587 303 aa21.29■■□□□ 1
SSBP2-207ENST00000507472 PHACTR3Q96KR7 559 aa21.29■■□□□ 1
SSBP2-207ENST00000507472 ZBTB1Q9Y2K1 713 aa21.29■■□□□ 1
SSBP2-207ENST00000507472 KIF13BQ9NQT8 1826 aa21.29■■□□□ 1
SSBP2-207ENST00000507472 C4AP0C0L4 1744 aa21.29■■□□□ 1
SSBP2-207ENST00000507472 TTC5Q8N0Z6 440 aa21.28■■□□□ 1
SSBP2-207ENST00000507472 KCPQ6ZWJ8 1503 aa21.28■■□□□ 1
SSBP2-207ENST00000507472 POLRMTO00411 1230 aaKnown RBP21.27■■□□□ 1
SSBP2-207ENST00000507472 FCHSD2O94868 740 aa21.27■■□□□ 1
SSBP2-207ENST00000507472 PPP2R1AP30153 589 aa21.27■■□□□ 1
SSBP2-207ENST00000507472 PRKAR2BP31323 418 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms