RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 GTF2E1P29083 439 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P15-201ENST00000507326 TSGA10IPQ3SY00 556 aa6.64□□□□□ -1.35
HMGB3P15-201ENST00000507326 GNASQ5JWF2 1037 aa6.64□□□□□ -1.35
HMGB3P15-201ENST00000507326 TMEM214Q6NUQ4 689 aaKnown RBP6.64□□□□□ -1.35
HMGB3P15-201ENST00000507326 XAGE2Q96GT9 111 aa6.64□□□□□ -1.35
HMGB3P15-201ENST00000507326 HRH3Q9Y5N1 445 aa6.64□□□□□ -1.35
HMGB3P15-201ENST00000507326 A0A1B0GTH6 734 aa6.63□□□□□ -1.35
HMGB3P15-201ENST00000507326 IGHA1P01876 353 aa6.63□□□□□ -1.35
HMGB3P15-201ENST00000507326 FOXK2Q01167 660 aa6.63□□□□□ -1.35
HMGB3P15-201ENST00000507326 C4orf17Q53FE4 359 aa6.63□□□□□ -1.35
HMGB3P15-201ENST00000507326 PODNQ7Z5L7 613 aa6.63□□□□□ -1.35
HMGB3P15-201ENST00000507326 BEND7Q8N7W2 519 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P15-201ENST00000507326 FHDC1Q9C0D6 1143 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P15-201ENST00000507326 RUBCNLQ9H714 662 aa6.63□□□□□ -1.35
HMGB3P15-201ENST00000507326 DOLKQ9UPQ8 538 aa6.63□□□□□ -1.35
HMGB3P15-201ENST00000507326 OIP5O43482 229 aa6.62□□□□□ -1.35
HMGB3P15-201ENST00000507326 MAP2K3P46734 347 aa6.62□□□□□ -1.35
HMGB3P15-201ENST00000507326 EIF4G2P78344 907 aaKnown RBP eCLIP6.62□□□□□ -1.35
HMGB3P15-201ENST00000507326 SLFNL1Q499Z3 407 aa6.62□□□□□ -1.35
HMGB3P15-201ENST00000507326 OXLD1Q5BKU9 147 aa6.62□□□□□ -1.35
HMGB3P15-201ENST00000507326 ESCO1Q5FWF5 840 aa6.62□□□□□ -1.35
HMGB3P15-201ENST00000507326 OXCT2Q9BYC2 517 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P15-201ENST00000507326 MSX1P28360 303 aa6.61□□□□□ -1.35
HMGB3P15-201ENST00000507326 IRF5Q13568 498 aa6.61□□□□□ -1.35
HMGB3P15-201ENST00000507326 RNF135Q8IUD6 432 aa6.61□□□□□ -1.35
HMGB3P15-201ENST00000507326 PHTF2Q8N3S3 785 aa6.61□□□□□ -1.35
HMGB3P15-201ENST00000507326 DCAF5Q96JK2 942 aa6.61□□□□□ -1.35
HMGB3P15-201ENST00000507326 CFHR5Q9BXR6 569 aa6.61□□□□□ -1.35
HMGB3P15-201ENST00000507326 ETNK1Q9HBU6 452 aa6.61□□□□□ -1.35
HMGB3P15-201ENST00000507326 PRM3Q9NNZ6 103 aa6.61□□□□□ -1.35
HMGB3P15-201ENST00000507326 PHF24Q9UPV7 400 aa6.61□□□□□ -1.35
HMGB3P15-201ENST00000507326 CSB-PGBD3P0DP91 1061 aa6.6□□□□□ -1.35
HMGB3P15-201ENST00000507326 VAC14Q08AM6 782 aa6.6□□□□□ -1.35
HMGB3P15-201ENST00000507326 USP4Q13107 963 aa6.6□□□□□ -1.35
HMGB3P15-201ENST00000507326 TLR1Q15399 786 aa6.6□□□□□ -1.35
HMGB3P15-201ENST00000507326 TPRNQ4KMQ1 711 aa6.6□□□□□ -1.35
HMGB3P15-201ENST00000507326 PGBD3Q8N328 593 aa6.6□□□□□ -1.35
HMGB3P15-201ENST00000507326 KLRG1Q96E93 195 aa6.6□□□□□ -1.35
HMGB3P15-201ENST00000507326 UBAP2LQ14157 1087 aaKnown RBP6.59□□□□□ -1.35
HMGB3P15-201ENST00000507326 PLA2G4EQ3MJ16 856 aa6.59□□□□□ -1.35
HMGB3P15-201ENST00000507326 RHBDD1Q8TEB9 315 aa6.59□□□□□ -1.35
HMGB3P15-201ENST00000507326 LRRC4BQ9NT99 713 aa6.59□□□□□ -1.35
HMGB3P15-201ENST00000507326 SHISA8B8ZZ34 492 aa6.58□□□□□ -1.36
HMGB3P15-201ENST00000507326 ABL2P42684 1182 aa6.58□□□□□ -1.36
HMGB3P15-201ENST00000507326 PLA2G4AP47712 749 aa6.58□□□□□ -1.36
HMGB3P15-201ENST00000507326 SNRPNP63162 240 aaKnown RBP6.58□□□□□ -1.36
HMGB3P15-201ENST00000507326 LBRQ14739 615 aaKnown RBP6.58□□□□□ -1.36
HMGB3P15-201ENST00000507326 EFHC2Q5JST6 749 aa6.58□□□□□ -1.36
HMGB3P15-201ENST00000507326 PPARGC1BQ86YN6 1023 aaKnown RBP6.58□□□□□ -1.36
HMGB3P15-201ENST00000507326 GALNT6Q8NCL4 622 aa6.58□□□□□ -1.36
HMGB3P15-201ENST00000507326 GDPD2Q9HCC8 539 aa6.58□□□□□ -1.36
HMGB3P15-201ENST00000507326 MSTNO14793 375 aa6.57□□□□□ -1.36
HMGB3P15-201ENST00000507326 ITGB2P05107 769 aa6.57□□□□□ -1.36
HMGB3P15-201ENST00000507326 C1orf229Q6ZS94 237 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P15-201ENST00000507326 SIRT1Q96EB6 747 aa6.57□□□□□ -1.36
HMGB3P15-201ENST00000507326 ABHD17AQ96GS6 310 aa6.57□□□□□ -1.36
HMGB3P15-201ENST00000507326 GDF2Q9UK05 429 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P15-201ENST00000507326 BNIP3LO60238 219 aa6.56□□□□□ -1.36
HMGB3P15-201ENST00000507326 BMP4P12644 408 aa6.56□□□□□ -1.36
HMGB3P15-201ENST00000507326 SCNN1DP51172 638 aa6.56□□□□□ -1.36
HMGB3P15-201ENST00000507326 GDF10P55107 478 aa6.56□□□□□ -1.36
HMGB3P15-201ENST00000507326 EDARADDQ8WWZ3 215 aa6.56□□□□□ -1.36
HMGB3P15-201ENST00000507326 SPOCK3Q9BQ16 436 aa6.56□□□□□ -1.36
HMGB3P15-201ENST00000507326 RRAGCQ9HB90 399 aa6.56□□□□□ -1.36
HMGB3P15-201ENST00000507326 CHIC2Q9UKJ5 165 aa6.56□□□□□ -1.36
HMGB3P15-201ENST00000507326 ATXN7L1Q9ULK2 861 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P15-201ENST00000507326 C2CD2LO14523 706 aa6.55□□□□□ -1.36
HMGB3P15-201ENST00000507326 FGFR3P22607 806 aa6.55□□□□□ -1.36
HMGB3P15-201ENST00000507326 CTBSQ01459 385 aa6.55□□□□□ -1.36
HMGB3P15-201ENST00000507326 TBC1D9Q6ZT07 1266 aa6.55□□□□□ -1.36
HMGB3P15-201ENST00000507326 GOLGA6L1Q8N7Z2 621 aa6.55□□□□□ -1.36
HMGB3P15-201ENST00000507326 CRISPLD1Q9H336 500 aa6.55□□□□□ -1.36
HMGB3P15-201ENST00000507326 NDFIP2Q9NV92 336 aa6.55□□□□□ -1.36
HMGB3P15-201ENST00000507326 MKL2Q9ULH7 1088 aa6.55□□□□□ -1.36
HMGB3P15-201ENST00000507326 INHAP05111 366 aa6.54□□□□□ -1.36
HMGB3P15-201ENST00000507326 PLPP7Q8NBV4 271 aa6.54□□□□□ -1.36
HMGB3P15-201ENST00000507326 AIDAQ96BJ3 306 aa6.54□□□□□ -1.36
HMGB3P15-201ENST00000507326 SERTAD1Q9UHV2 236 aa6.54□□□□□ -1.36
HMGB3P15-201ENST00000507326 ATP4AP20648 1035 aa6.53□□□□□ -1.36
HMGB3P15-201ENST00000507326 AMPD1P23109 780 aa6.53□□□□□ -1.36
HMGB3P15-201ENST00000507326 SEMA3FQ13275 785 aa6.53□□□□□ -1.36
HMGB3P15-201ENST00000507326 MAP7D1Q3KQU3 841 aa6.53□□□□□ -1.36
HMGB3P15-201ENST00000507326 ZCCHC2Q9C0B9 1178 aaKnown RBP6.53□□□□□ -1.36
HMGB3P15-201ENST00000507326 GGA1Q9UJY5 639 aa6.53□□□□□ -1.36
HMGB3P15-201ENST00000507326 PROCP04070 461 aa6.52□□□□□ -1.37
HMGB3P15-201ENST00000507326 SMTNP53814 917 aa6.52□□□□□ -1.37
HMGB3P15-201ENST00000507326 WASHC4Q2M389 1173 aa6.52□□□□□ -1.37
HMGB3P15-201ENST00000507326 SLCO4C1Q6ZQN7 724 aa6.52□□□□□ -1.37
HMGB3P15-201ENST00000507326 NIFKQ9BYG3 293 aaKnown RBP6.52□□□□□ -1.37
HMGB3P15-201ENST00000507326 DNAAF2Q9NVR5 837 aaKnown RBP6.52□□□□□ -1.37
HMGB3P15-201ENST00000507326 KRBA1A5PL33 1030 aa6.51□□□□□ -1.37
HMGB3P15-201ENST00000507326 COL8A1P27658 744 aa6.51□□□□□ -1.37
HMGB3P15-201ENST00000507326 GRIN2CQ14957 1233 aa6.51□□□□□ -1.37
HMGB3P15-201ENST00000507326 FIGNL1Q6PIW4 674 aa6.51□□□□□ -1.37
HMGB3P15-201ENST00000507326 PCDHGC4Q9Y5F7 938 aa6.51□□□□□ -1.37
HMGB3P15-201ENST00000507326 A0A1W2PNR3 127 aa6.5□□□□□ -1.37
HMGB3P15-201ENST00000507326 DCDC2BA2VCK2 349 aa6.5□□□□□ -1.37
HMGB3P15-201ENST00000507326 NEURL1BA8MQ27 555 aa6.5□□□□□ -1.37
HMGB3P15-201ENST00000507326 TMEM229AB2RXF0 380 aa6.5□□□□□ -1.37
HMGB3P15-201ENST00000507326 PIK3CDO00329 1044 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms