RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 MTHFSP49914 203 aa14.57□□□□□ -0.08
SNCA-210ENST00000506691 CFAP53Q96M91 514 aa14.57□□□□□ -0.08
SNCA-210ENST00000506691 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.56□□□□□ -0.08
SNCA-210ENST00000506691 PPM1GO15355 546 aaPredicted RBP14.56□□□□□ -0.08
SNCA-210ENST00000506691 FBLN1P23142 703 aa14.56□□□□□ -0.08
SNCA-210ENST00000506691 PPP2R1AP30153 589 aa14.56□□□□□ -0.08
SNCA-210ENST00000506691 TGFB2P61812 414 aa14.56□□□□□ -0.08
SNCA-210ENST00000506691 MSL1Q68DK7 614 aa14.56□□□□□ -0.08
SNCA-210ENST00000506691 MPRIPQ6WCQ1 1025 aa14.56□□□□□ -0.08
SNCA-210ENST00000506691 SPG7Q9UQ90 795 aa14.56□□□□□ -0.08
SNCA-210ENST00000506691 EMILIN1Q9Y6C2 1016 aa14.56□□□□□ -0.08
SNCA-210ENST00000506691 APLP1P51693 650 aa14.55□□□□□ -0.08
SNCA-210ENST00000506691 HSP90AB2PQ58FF8 381 aa14.55□□□□□ -0.08
SNCA-210ENST00000506691 MYBBP1AQ9BQG0 1328 aaKnown RBP14.55□□□□□ -0.08
SNCA-210ENST00000506691 LOC102724428A0A0B4J2F2 783 aa14.54□□□□□ -0.08
SNCA-210ENST00000506691 KIF3CO14782 793 aa14.54□□□□□ -0.08
SNCA-210ENST00000506691 ADRA2BP18089 450 aa14.54□□□□□ -0.08
SNCA-210ENST00000506691 SIK1P57059 783 aa14.54□□□□□ -0.08
SNCA-210ENST00000506691 CNGB1Q14028 1251 aaPredicted RBP14.54□□□□□ -0.08
SNCA-210ENST00000506691 TOMM70O94826 608 aa14.53□□□□□ -0.08
SNCA-210ENST00000506691 PIGBQ92521 554 aa14.53□□□□□ -0.08
SNCA-210ENST00000506691 DIEXFQ68CQ4 756 aaKnown RBP14.52□□□□□ -0.09
SNCA-210ENST00000506691 NLGN1Q8N2Q7 840 aa14.52□□□□□ -0.09
SNCA-210ENST00000506691 NUDCQ9Y266 331 aa14.52□□□□□ -0.09
SNCA-210ENST00000506691 KIAA1551Q9HCM1 1747 aa14.52□□□□□ -0.09
SNCA-210ENST00000506691 PXDNLA1KZ92 1463 aa14.51□□□□□ -0.09
SNCA-210ENST00000506691 DIAPH1O60610 1272 aaKnown RBP14.51□□□□□ -0.09
SNCA-210ENST00000506691 USHBP1Q8N6Y0 703 aa14.51□□□□□ -0.09
SNCA-210ENST00000506691 TMOD3Q9NYL9 352 aa14.51□□□□□ -0.09
SNCA-210ENST00000506691 C10orf71Q711Q0 1435 aa14.5□□□□□ -0.09
SNCA-210ENST00000506691 RC3H1Q5TC82 1133 aaKnown RBP14.5□□□□□ -0.09
SNCA-210ENST00000506691 IFNL2Q8IZJ0 200 aa14.5□□□□□ -0.09
SNCA-210ENST00000506691 KDRP35968 1356 aa14.49□□□□□ -0.09
SNCA-210ENST00000506691 BRCA1P38398 1863 aaKnown RBP14.49□□□□□ -0.09
SNCA-210ENST00000506691 EIF4A2Q14240 407 aaKnown RBP14.49□□□□□ -0.09
SNCA-210ENST00000506691 AMIGO3Q86WK7 504 aa14.49□□□□□ -0.09
SNCA-210ENST00000506691 LINC00116Q8NCU8 138 aa14.49□□□□□ -0.09
SNCA-210ENST00000506691 IL13P35225 146 aa14.48□□□□□ -0.09
SNCA-210ENST00000506691 ARFGEF1Q9Y6D6 1849 aa14.48□□□□□ -0.09
SNCA-210ENST00000506691 CNTNAP4Q9C0A0 1308 aa14.47□□□□□ -0.09
SNCA-210ENST00000506691 COL5A3P25940 1745 aaPredicted RBP14.47□□□□□ -0.09
SNCA-210ENST00000506691 ERVV-2B6SEH9 535 aa14.47□□□□□ -0.09
SNCA-210ENST00000506691 HSP90AB1P08238 724 aaKnown RBP14.47□□□□□ -0.09
SNCA-210ENST00000506691 MMP10P09238 476 aa14.47□□□□□ -0.09
SNCA-210ENST00000506691 PHKG2P15735 406 aa14.47□□□□□ -0.09
SNCA-210ENST00000506691 ATP6V1AP38606 617 aa14.47□□□□□ -0.09
SNCA-210ENST00000506691 DNAJC5GQ8N7S2 189 aa14.47□□□□□ -0.09
SNCA-210ENST00000506691 RBM46Q8TBY0 533 aaKnown RBP14.47□□□□□ -0.09
SNCA-210ENST00000506691 PNNQ9H307 717 aaKnown RBP14.47□□□□□ -0.09
SNCA-210ENST00000506691 RTCBQ9Y3I0 505 aaKnown RBP14.47□□□□□ -0.09
SNCA-210ENST00000506691 C4AP0C0L4 1744 aa14.46□□□□□ -0.09
SNCA-210ENST00000506691 GNPATO15228 680 aa14.46□□□□□ -0.09
SNCA-210ENST00000506691 PHF14O94880 888 aa14.46□□□□□ -0.09
SNCA-210ENST00000506691 TRAPPC3LQ5T215 181 aa14.46□□□□□ -0.09
SNCA-210ENST00000506691 FSTL1Q12841 308 aa14.45□□□□□ -0.1
SNCA-210ENST00000506691 ITPK1Q13572 414 aa14.45□□□□□ -0.1
SNCA-210ENST00000506691 ZNF526Q8TF50 670 aaPredicted RBP14.45□□□□□ -0.1
SNCA-210ENST00000506691 EYA1Q99502 592 aa14.45□□□□□ -0.1
SNCA-210ENST00000506691 ATG3Q9NT62 314 aa14.45□□□□□ -0.1
SNCA-210ENST00000506691 CCDC87Q9NVE4 849 aa14.45□□□□□ -0.1
SNCA-210ENST00000506691 ZC3H4Q9UPT8 1303 aaKnown RBP14.44□□□□□ -0.1
SNCA-210ENST00000506691 ASAP1Q9ULH1 1129 aa14.44□□□□□ -0.1
SNCA-210ENST00000506691 CCER2I3L3R5 266 aa14.43□□□□□ -0.1
SNCA-210ENST00000506691 RPS6KA4O75676 772 aa14.43□□□□□ -0.1
SNCA-210ENST00000506691 FCHSD2O94868 740 aa14.43□□□□□ -0.1
SNCA-210ENST00000506691 JMYQ8N9B5 988 aa14.43□□□□□ -0.1
SNCA-210ENST00000506691 DCAF5Q96JK2 942 aa14.43□□□□□ -0.1
SNCA-210ENST00000506691 WDR90Q96KV7 1748 aa14.43□□□□□ -0.1
SNCA-210ENST00000506691 COL3A1P02461 1466 aaPredicted RBP14.42□□□□□ -0.1
SNCA-210ENST00000506691 N4BP2Q86UW6 1770 aaPredicted RBP14.42□□□□□ -0.1
SNCA-210ENST00000506691 U2SURPO15042 1029 aaKnown RBP14.41□□□□□ -0.1
SNCA-210ENST00000506691 GYS1P13807 737 aa14.41□□□□□ -0.1
SNCA-210ENST00000506691 AMOTQ4VCS5 1084 aa14.41□□□□□ -0.1
SNCA-210ENST00000506691 BCS1LQ9Y276 419 aa14.41□□□□□ -0.1
SNCA-210ENST00000506691 TNRC6CQ9HCJ0 1690 aaKnown RBP14.41□□□□□ -0.1
SNCA-210ENST00000506691 KDM2BQ8NHM5 1336 aa14.41□□□□□ -0.1
SNCA-210ENST00000506691 NEFMP07197 916 aa14.4□□□□□ -0.1
SNCA-210ENST00000506691 U2AF1L5P0DN76 240 aaPredicted RBP14.4□□□□□ -0.1
SNCA-210ENST00000506691 RFC4P35249 363 aa14.4□□□□□ -0.1
SNCA-210ENST00000506691 U2AF1Q01081 240 aaKnown RBP eCLIP14.4□□□□□ -0.1
SNCA-210ENST00000506691 WDR43Q15061 677 aaKnown RBP eCLIP14.4□□□□□ -0.1
SNCA-210ENST00000506691 SULT6B1Q6IMI4 303 aa14.4□□□□□ -0.1
SNCA-210ENST00000506691 ARHGEF1Q92888 912 aaKnown RBP14.4□□□□□ -0.1
SNCA-210ENST00000506691 PIM2Q9P1W9 311 aa14.4□□□□□ -0.1
SNCA-210ENST00000506691 PARP3Q9Y6F1 533 aa14.4□□□□□ -0.1
SNCA-210ENST00000506691 A0A0G2JLW4 131 aa14.38□□□□□ -0.11
SNCA-210ENST00000506691 KCNA3P22001 575 aa14.38□□□□□ -0.11
SNCA-210ENST00000506691 PLEKHO1Q53GL0 409 aaPredicted RBP14.38□□□□□ -0.11
SNCA-210ENST00000506691 ARHGAP27Q6ZUM4 889 aa14.38□□□□□ -0.11
SNCA-210ENST00000506691 KLRG1Q96E93 195 aa14.38□□□□□ -0.11
SNCA-210ENST00000506691 MRS2Q9HD23 443 aa14.38□□□□□ -0.11
SNCA-210ENST00000506691 DPEP1P16444 411 aa14.37□□□□□ -0.11
SNCA-210ENST00000506691 C16orf71Q8IYS4 520 aaPredicted RBP14.37□□□□□ -0.11
SNCA-210ENST00000506691 SLC4A9Q96Q91 983 aa14.37□□□□□ -0.11
SNCA-210ENST00000506691 MYH14Q7Z406 1995 aaKnown RBP14.36□□□□□ -0.11
SNCA-210ENST00000506691 KDM6AO15550 1401 aaPredicted RBP14.36□□□□□ -0.11
SNCA-210ENST00000506691 DALRD3Q5D0E6 543 aaKnown RBP14.36□□□□□ -0.11
SNCA-210ENST00000506691 NMRK2Q9NPI5 230 aa14.36□□□□□ -0.11
SNCA-210ENST00000506691 USP42Q9H9J4 1324 aaKnown RBP14.36□□□□□ -0.11
SNCA-210ENST00000506691 C9orf131Q5VYM1 1079 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms