RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 BARGINQ6ZT62 677 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 CEP120Q8N960 986 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 SYMPKQ92797 1274 aaKnown RBP2.97□□□□□ -1.93
NEDD4-205ENST00000506154 LTN1O94822 1766 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 PPIP5K1Q6PFW1 1433 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 MAFGO15525 162 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.97□□□□□ -1.932e-6■■■□□ 17.5
NEDD4-205ENST00000506154 RNF19AQ9NV58 838 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 COG6Q9Y2V7 657 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 IPO9Q96P70 1041 aaKnown RBP2.97□□□□□ -1.93
NEDD4-205ENST00000506154 DISP2A7MBM2 1401 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 DDX11L8A8MPP1 907 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 RIPK4P57078 832 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 ZRANB1Q9UGI0 708 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 LIMD1Q9UGP4 676 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 LY75O60449 1722 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 ROBO2Q9HCK4 1378 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 DISP3Q9P2K9 1392 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 TMC1Q8TDI8 760 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 NUP188Q5SRE5 1749 aa2.97□□□□□ -1.93
NEDD4-205ENST00000506154 SPAG9O60271 1321 aaKnown RBP2.96□□□□□ -1.93
NEDD4-205ENST00000506154 GIPC2Q8TF65 315 aa2.96□□□□□ -1.93
NEDD4-205ENST00000506154 NINLQ9Y2I6 1382 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 TNS1Q9HBL0 1735 aaKnown RBP2.96□□□□□ -1.94
NEDD4-205ENST00000506154 ZBED9Q6R2W3 1325 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 KCNH2Q12809 1159 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 SMYD5Q6GMV2 418 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.96□□□□□ -1.94
NEDD4-205ENST00000506154 LRRN4Q8WUT4 740 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 TMEM106CQ9BVX2 250 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 RYDENQ9NUL5 291 aaKnown RBP2.96□□□□□ -1.94
NEDD4-205ENST00000506154 GEMIN8Q9NWZ8 242 aaKnown RBP2.96□□□□□ -1.94
NEDD4-205ENST00000506154 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-205ENST00000506154 CASZ1Q86V15 1759 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 E9PSI1 815 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 PRMT3O60678 531 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 PHF14O94880 888 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 A0A1B0GUL6 1792 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 PIK3CDO00329 1044 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 RAPGEF3O95398 923 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 NAA30Q147X3 362 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-205ENST00000506154 AXDND1Q5T1B0 1012 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-205ENST00000506154 DDRGK1Q96HY6 314 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 ZNF594Q96JF6 807 aaPredicted RBP2.96□□□□□ -1.94
NEDD4-205ENST00000506154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.96□□□□□ -1.942e-6■■■■■ 27.4
NEDD4-205ENST00000506154 TNRQ92752 1358 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 LAMB1P07942 1786 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 TJP1Q07157 1748 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 STAU1O95793 577 aaKnown RBP2.96□□□□□ -1.94
NEDD4-205ENST00000506154 STK32AQ8WU08 396 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 ARHGEF1Q92888 912 aaKnown RBP2.96□□□□□ -1.94
NEDD4-205ENST00000506154 LAMB4A4D0S4 1761 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 AATKQ6ZMQ8 1374 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 NRXN2Q9P2S2 1712 aa2.96□□□□□ -1.94
NEDD4-205ENST00000506154 LRP5O75197 1615 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 KIF20AO95235 890 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 RGS3P49796 1198 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 EGFL6Q8IUX8 553 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 KTN1Q86UP2 1357 aaKnown RBP2.95□□□□□ -1.94
NEDD4-205ENST00000506154 PITPNM1O00562 1244 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 MRRFQ96E11 262 aaKnown RBP2.95□□□□□ -1.94
NEDD4-205ENST00000506154 ZBTB12Q9Y330 459 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-205ENST00000506154 TMEM94Q12767 1356 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 TMED8Q6PL24 325 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-205ENST00000506154 HMX1Q9NP08 348 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-205ENST00000506154 USP19O94966 1318 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 CCDC7Q96M83 1385 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 CCER2I3L3R5 266 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 LTBP1Q14766 1721 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 SCN11AQ9UI33 1791 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 DLG5Q8TDM6 1919 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 RDH13Q8NBN7 331 aa2.95□□□□□ -1.94
NEDD4-205ENST00000506154 ZNF622Q969S3 477 aaKnown RBP eCLIP2.95□□□□□ -1.943e-6■■■□□ 16.2
NEDD4-205ENST00000506154 DDX60Q8IY21 1712 aaKnown RBP2.94□□□□□ -1.94
NEDD4-205ENST00000506154 PDAP1Q13442 181 aaKnown RBP2.94□□□□□ -1.94
NEDD4-205ENST00000506154 FARP1Q9Y4F1 1045 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-205ENST00000506154 ADGRF5Q8IZF2 1346 aa2.94□□□□□ -1.94
NEDD4-205ENST00000506154 OVOS2A0A0G2JMS6 1433 aa2.94□□□□□ -1.94
NEDD4-205ENST00000506154 SETQ01105 290 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-205ENST00000506154 CNPY4Q8N129 248 aa2.94□□□□□ -1.94
NEDD4-205ENST00000506154 CFAP65Q6ZU64 1925 aaKnown RBP2.94□□□□□ -1.94
NEDD4-205ENST00000506154 BCORQ6W2J9 1755 aa2.94□□□□□ -1.94
NEDD4-205ENST00000506154 CLSTN1O94985 981 aa2.94□□□□□ -1.94
NEDD4-205ENST00000506154 HSP90AA2PQ14568 343 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-205ENST00000506154 FAM43BQ6ZT52 329 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-205ENST00000506154 SLX1AQ9BQ83 275 aa2.94□□□□□ -1.94
NEDD4-205ENST00000506154 SBF2Q86WG5 1849 aa2.94□□□□□ -1.94
NEDD4-205ENST00000506154 NPHP4O75161 1426 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-205ENST00000506154 TMC2Q8TDI7 906 aa2.94□□□□□ -1.94
NEDD4-205ENST00000506154 PCDHB9Q9Y5E1 797 aa2.94□□□□□ -1.94
NEDD4-205ENST00000506154 LAMB2P55268 1798 aa2.94□□□□□ -1.94
NEDD4-205ENST00000506154 COL14A1Q05707 1796 aaKnown RBP2.94□□□□□ -1.94
NEDD4-205ENST00000506154 CLGNO14967 610 aa2.93□□□□□ -1.94
NEDD4-205ENST00000506154 HMGB1P09429 215 aaKnown RBP2.93□□□□□ -1.94
NEDD4-205ENST00000506154 SSTR3P32745 418 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-205ENST00000506154 CTDSPL2Q05D32 466 aa2.93□□□□□ -1.94
NEDD4-205ENST00000506154 CAPN12Q6ZSI9 719 aa2.93□□□□□ -1.94
NEDD4-205ENST00000506154 PRKAR2AP13861 404 aaKnown RBP2.93□□□□□ -1.94
NEDD4-205ENST00000506154 PADI6Q6TGC4 694 aa2.93□□□□□ -1.94
NEDD4-205ENST00000506154 ZNF662Q6ZS27 426 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 204.7 ms