RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 TUBGCP6Q96RT7 1819 aa16.4■□□□□ 0.22
PDLIM7-214ENST00000505746 GNPATO15228 680 aa16.4■□□□□ 0.22
PDLIM7-214ENST00000505746 GRIN3BO60391 1043 aa16.4■□□□□ 0.22
PDLIM7-214ENST00000505746 IL13P35225 146 aa16.4■□□□□ 0.22
PDLIM7-214ENST00000505746 MTHFSP49914 203 aa16.4■□□□□ 0.22
PDLIM7-214ENST00000505746 CABP4P57796 275 aa16.4■□□□□ 0.22
PDLIM7-214ENST00000505746 AEBP1Q8IUX7 1158 aa16.4■□□□□ 0.22
PDLIM7-214ENST00000505746 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
PDLIM7-214ENST00000505746 AMIGO3Q86WK7 504 aa16.39■□□□□ 0.21
PDLIM7-214ENST00000505746 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-214ENST00000505746 ITGB4P16144 1822 aa16.38■□□□□ 0.21
PDLIM7-214ENST00000505746 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
PDLIM7-214ENST00000505746 PER1O15534 1290 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-214ENST00000505746 RTCBQ9Y3I0 505 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-214ENST00000505746 KDRP35968 1356 aa16.37■□□□□ 0.21
PDLIM7-214ENST00000505746 TRAPPC3LQ5T215 181 aa16.36■□□□□ 0.21
PDLIM7-214ENST00000505746 RC3H1Q5TC82 1133 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-214ENST00000505746 YBX3P16989 372 aaKnown RBP eCLIP16.35■□□□□ 0.21
PDLIM7-214ENST00000505746 NFATC2IPQ8NCF5 419 aa16.35■□□□□ 0.21
PDLIM7-214ENST00000505746 SLC4A9Q96Q91 983 aa16.35■□□□□ 0.21
PDLIM7-214ENST00000505746 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
PDLIM7-214ENST00000505746 KDM6AO15550 1401 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-214ENST00000505746 AKAP4Q5JQC9 854 aa16.34■□□□□ 0.21
PDLIM7-214ENST00000505746 CC2D1BQ5T0F9 858 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-214ENST00000505746 DIAPH1O60610 1272 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-214ENST00000505746 ADRA2BP18089 450 aa16.33■□□□□ 0.2
PDLIM7-214ENST00000505746 CNTNAP4Q9C0A0 1308 aa16.33■□□□□ 0.2
PDLIM7-214ENST00000505746 UTRNP46939 3433 aa16.32■□□□□ 0.2
PDLIM7-214ENST00000505746 PTCD1O75127 700 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-214ENST00000505746 RPS6KA4O75676 772 aa16.32■□□□□ 0.2
PDLIM7-214ENST00000505746 NLGN1Q8N2Q7 840 aa16.32■□□□□ 0.2
PDLIM7-214ENST00000505746 HMOX1P09601 288 aa16.31■□□□□ 0.2
PDLIM7-214ENST00000505746 RFC4P35249 363 aa16.31■□□□□ 0.2
PDLIM7-214ENST00000505746 ARHGEF1Q92888 912 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-214ENST00000505746 NPC1L1Q9UHC9 1359 aa16.3■□□□□ 0.2
PDLIM7-214ENST00000505746 MMP10P09238 476 aa16.3■□□□□ 0.2
PDLIM7-214ENST00000505746 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
PDLIM7-214ENST00000505746 SLC52A2Q9HAB3 445 aa16.28■□□□□ 0.2
PDLIM7-214ENST00000505746 RNMTO43148 476 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-214ENST00000505746 CRKLP46109 303 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-214ENST00000505746 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-214ENST00000505746 MTHFSDQ2M296 383 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-214ENST00000505746 LGR6Q9HBX8 967 aa16.27■□□□□ 0.2
PDLIM7-214ENST00000505746 ZNF831Q5JPB2 1677 aa16.27■□□□□ 0.19
PDLIM7-214ENST00000505746 CHD4Q14839 1912 aa16.26■□□□□ 0.19
PDLIM7-214ENST00000505746 GYS1P13807 737 aa16.26■□□□□ 0.19
PDLIM7-214ENST00000505746 U2SURPO15042 1029 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-214ENST00000505746 GIGYF1O75420 1035 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-214ENST00000505746 C1QTNF8P60827 252 aa16.25■□□□□ 0.19
PDLIM7-214ENST00000505746 TGFB2P61812 414 aa16.25■□□□□ 0.19
PDLIM7-214ENST00000505746 CCDC87Q9NVE4 849 aa16.25■□□□□ 0.19
PDLIM7-214ENST00000505746 PARP3Q9Y6F1 533 aa16.25■□□□□ 0.19
PDLIM7-214ENST00000505746 INTS5Q6P9B9 1019 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-214ENST00000505746 WWC3Q9ULE0 1092 aa16.23■□□□□ 0.19
PDLIM7-214ENST00000505746 SLC39A6Q13433 755 aa16.22■□□□□ 0.19
PDLIM7-214ENST00000505746 DNAJC10Q8IXB1 793 aa16.22■□□□□ 0.19
PDLIM7-214ENST00000505746 GAS2L2Q8NHY3 880 aa16.22■□□□□ 0.19
PDLIM7-214ENST00000505746 CFAP53Q96M91 514 aa16.22■□□□□ 0.19
PDLIM7-214ENST00000505746 GOLGB1Q14789 3259 aaKnown RBP16.21■□□□□ 0.19
PDLIM7-214ENST00000505746 VSIG10Q8N0Z9 540 aa16.21■□□□□ 0.19
PDLIM7-214ENST00000505746 USP42Q9H9J4 1324 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-214ENST00000505746 A0A0G2JLW4 131 aa16.2■□□□□ 0.18
PDLIM7-214ENST00000505746 ZPR1O75312 459 aa16.2■□□□□ 0.18
PDLIM7-214ENST00000505746 CYP19A1P11511 503 aaPredicted RBP16.2■□□□□ 0.18
PDLIM7-214ENST00000505746 SRP68Q9UHB9 627 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-214ENST00000505746 MRC1P22897 1456 aa16.2■□□□□ 0.18
PDLIM7-214ENST00000505746 CICQ96RK0 1608 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-214ENST00000505746 COL5A3P25940 1745 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-214ENST00000505746 PXDNLA1KZ92 1463 aa16.19■□□□□ 0.18
PDLIM7-214ENST00000505746 GNAT3A8MTJ3 354 aa16.19■□□□□ 0.18
PDLIM7-214ENST00000505746 TEFQ10587 303 aa16.19■□□□□ 0.18
PDLIM7-214ENST00000505746 FKBP8Q14318 412 aa16.19■□□□□ 0.18
PDLIM7-214ENST00000505746 TTC5Q8N0Z6 440 aa16.19■□□□□ 0.18
PDLIM7-214ENST00000505746 NUDCQ9Y266 331 aa16.19■□□□□ 0.18
PDLIM7-214ENST00000505746 BCS1LQ9Y276 419 aa16.19■□□□□ 0.18
PDLIM7-214ENST00000505746 C10orf71Q711Q0 1435 aa16.19■□□□□ 0.18
PDLIM7-214ENST00000505746 ATP10DQ9P241 1426 aa16.19■□□□□ 0.18
PDLIM7-214ENST00000505746 COL3A1P02461 1466 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-214ENST00000505746 SENP3-EIF4A1A0A087X0R7 540 aa16.18■□□□□ 0.18
PDLIM7-214ENST00000505746 DPEP1P16444 411 aa16.18■□□□□ 0.18
PDLIM7-214ENST00000505746 GPBP1L1Q9HC44 474 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-214ENST00000505746 SOS1Q07889 1333 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-214ENST00000505746 SCN11AQ9UI33 1791 aa16.17■□□□□ 0.18
PDLIM7-214ENST00000505746 STARD3NLO95772 234 aa16.16■□□□□ 0.18
PDLIM7-214ENST00000505746 TM4SF1P30408 202 aa16.16■□□□□ 0.18
PDLIM7-214ENST00000505746 USPL1Q5W0Q7 1092 aa16.16■□□□□ 0.18
PDLIM7-214ENST00000505746 IL17REQ8NFR9 667 aa16.16■□□□□ 0.18
PDLIM7-214ENST00000505746 NARFQ9UHQ1 456 aa16.16■□□□□ 0.18
PDLIM7-214ENST00000505746 ADCY9O60503 1353 aa16.15■□□□□ 0.18
PDLIM7-214ENST00000505746 FCHSD2O94868 740 aa16.15■□□□□ 0.18
PDLIM7-214ENST00000505746 C4AP0C0L4 1744 aa16.15■□□□□ 0.18
PDLIM7-214ENST00000505746 PRKAR2BP31323 418 aa16.15■□□□□ 0.18
PDLIM7-214ENST00000505746 TJP1Q07157 1748 aa16.15■□□□□ 0.18
PDLIM7-214ENST00000505746 DDR1Q08345 913 aa16.15■□□□□ 0.18
PDLIM7-214ENST00000505746 TEX13AQ9BXU3 409 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-214ENST00000505746 PIM2Q9P1W9 311 aa16.15■□□□□ 0.18
PDLIM7-214ENST00000505746 ZBTB1Q9Y2K1 713 aa16.15■□□□□ 0.18
PDLIM7-214ENST00000505746 KCPQ6ZWJ8 1503 aa16.14■□□□□ 0.18
PDLIM7-214ENST00000505746 POLRMTO00411 1230 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-214ENST00000505746 PPP2R1AP30153 589 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms