RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 FAM98CQ17RN3 349 aaKnown RBP10.28□□□□□ -0.76
COL4A5-208ENST00000505728 AKAP4Q5JQC9 854 aa10.28□□□□□ -0.76
COL4A5-208ENST00000505728 FTSJ3Q8IY81 847 aaKnown RBP10.28□□□□□ -0.76
COL4A5-208ENST00000505728 IL17REQ8NFR9 667 aa10.28□□□□□ -0.76
COL4A5-208ENST00000505728 CLUAP1Q96AJ1 413 aa10.28□□□□□ -0.76
COL4A5-208ENST00000505728 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
COL4A5-208ENST00000505728 RGPD5Q99666 1765 aa10.28□□□□□ -0.76
COL4A5-208ENST00000505728 LRP5O75197 1615 aa10.28□□□□□ -0.76
COL4A5-208ENST00000505728 ERBB3P21860 1342 aa10.28□□□□□ -0.76
COL4A5-208ENST00000505728 RLBP1P12271 317 aa10.27□□□□□ -0.77
COL4A5-208ENST00000505728 TRIM27P14373 513 aa10.27□□□□□ -0.77
COL4A5-208ENST00000505728 CHMP4BQ9H444 224 aaKnown RBP10.27□□□□□ -0.77
COL4A5-208ENST00000505728 DDX19BQ9UMR2 479 aa10.27□□□□□ -0.77
COL4A5-208ENST00000505728 CAMTA1Q9Y6Y1 1673 aa10.27□□□□□ -0.77
COL4A5-208ENST00000505728 CACNA1FO60840 1977 aa10.26□□□□□ -0.77
COL4A5-208ENST00000505728 ELL2O00472 640 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-208ENST00000505728 FAM182BQ5T319 152 aa10.26□□□□□ -0.77
COL4A5-208ENST00000505728 ZNF530Q6P9A1 599 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-208ENST00000505728 CHMP4AQ9BY43 222 aa10.26□□□□□ -0.77
COL4A5-208ENST00000505728 API5Q9BZZ5 524 aaKnown RBP10.26□□□□□ -0.77
COL4A5-208ENST00000505728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.26□□□□□ -0.772e-6■■□□□ 11.7
COL4A5-208ENST00000505728 TNNQ9UQP3 1299 aa10.26□□□□□ -0.77
COL4A5-208ENST00000505728 SPATA31A5Q5VU36 1347 aa10.26□□□□□ -0.77
COL4A5-208ENST00000505728 SPATA31A7Q8IWB4 1347 aa10.26□□□□□ -0.77
COL4A5-208ENST00000505728 KDM2BQ8NHM5 1336 aa10.26□□□□□ -0.77
COL4A5-208ENST00000505728 CEMIPQ8WUJ3 1361 aa10.26□□□□□ -0.77
COL4A5-208ENST00000505728 TCERG1O14776 1098 aaKnown RBP10.25□□□□□ -0.77
COL4A5-208ENST00000505728 CSB-PGBD3P0DP91 1061 aa10.25□□□□□ -0.77
COL4A5-208ENST00000505728 TATP17735 454 aaPredicted RBP10.25□□□□□ -0.77
COL4A5-208ENST00000505728 SF3B2Q13435 895 aaKnown RBP10.25□□□□□ -0.77
COL4A5-208ENST00000505728 C1orf141Q5JVX7 400 aa10.25□□□□□ -0.77
COL4A5-208ENST00000505728 RAPGEF4Q8WZA2 1011 aa10.25□□□□□ -0.77
COL4A5-208ENST00000505728 NLRP2Q9NX02 1062 aa10.25□□□□□ -0.77
COL4A5-208ENST00000505728 LMO7Q8WWI1 1683 aa10.25□□□□□ -0.77
COL4A5-208ENST00000505728 A0A0G2JS52 829 aa10.24□□□□□ -0.77
COL4A5-208ENST00000505728 RNMTO43148 476 aaKnown RBP10.24□□□□□ -0.77
COL4A5-208ENST00000505728 MYT1Q01538 1121 aa10.24□□□□□ -0.77
COL4A5-208ENST00000505728 LRRC37A3O60309 1634 aa10.24□□□□□ -0.77
COL4A5-208ENST00000505728 FAM208AQ9UK61 1670 aaKnown RBP10.24□□□□□ -0.77
COL4A5-208ENST00000505728 OVOS2A0A0G2JMS6 1433 aa10.24□□□□□ -0.77
COL4A5-208ENST00000505728 CHRNA2Q15822 529 aa10.23□□□□□ -0.77
COL4A5-208ENST00000505728 TMEM57Q8N5G2 664 aa10.23□□□□□ -0.77
COL4A5-208ENST00000505728 RWDD1Q9H446 243 aaPredicted RBP10.23□□□□□ -0.77
COL4A5-208ENST00000505728 LGR6Q9HBX8 967 aa10.23□□□□□ -0.77
COL4A5-208ENST00000505728 PRDM11Q9NQV5 511 aa10.23□□□□□ -0.77
COL4A5-208ENST00000505728 MIS18AQ9NYP9 233 aa10.23□□□□□ -0.77
COL4A5-208ENST00000505728 SPG7Q9UQ90 795 aa10.23□□□□□ -0.77
COL4A5-208ENST00000505728 PSDA5PKW4 1024 aaPredicted RBP10.22□□□□□ -0.77
COL4A5-208ENST00000505728 TEFQ10587 303 aa10.22□□□□□ -0.77
COL4A5-208ENST00000505728 ITPRIPQ8IWB1 547 aa10.22□□□□□ -0.77
COL4A5-208ENST00000505728 PTPRCP08575 1304 aa10.22□□□□□ -0.77
COL4A5-208ENST00000505728 SPATA31A1Q5TZJ5 1347 aa10.22□□□□□ -0.77
COL4A5-208ENST00000505728 RREB1Q92766 1687 aa10.22□□□□□ -0.77
COL4A5-208ENST00000505728 HOXB7P09629 217 aa10.21□□□□□ -0.77
COL4A5-208ENST00000505728 BAG6P46379 1132 aa10.21□□□□□ -0.77
COL4A5-208ENST00000505728 EN1Q05925 392 aaPredicted RBP10.21□□□□□ -0.77
COL4A5-208ENST00000505728 KRT24Q2M2I5 525 aa10.21□□□□□ -0.77
COL4A5-208ENST00000505728 CCDC30Q5VVM6 783 aa10.21□□□□□ -0.77
COL4A5-208ENST00000505728 PCDHB15Q9Y5E8 787 aa10.21□□□□□ -0.77
COL4A5-208ENST00000505728 ABCC4O15439 1325 aa10.21□□□□□ -0.78
COL4A5-208ENST00000505728 DISP2A7MBM2 1401 aa10.21□□□□□ -0.78
COL4A5-208ENST00000505728 NUP188Q5SRE5 1749 aa10.21□□□□□ -0.78
COL4A5-208ENST00000505728 IGHDP01880 384 aa10.2□□□□□ -0.78
COL4A5-208ENST00000505728 SLC4A2P04920 1241 aa10.2□□□□□ -0.78
COL4A5-208ENST00000505728 HSP90AB1P08238 724 aaKnown RBP10.2□□□□□ -0.78
COL4A5-208ENST00000505728 MPRIPQ6WCQ1 1025 aa10.2□□□□□ -0.78
COL4A5-208ENST00000505728 IFNL2Q8IZJ0 200 aa10.2□□□□□ -0.78
COL4A5-208ENST00000505728 WDR17Q8IZU2 1322 aa10.2□□□□□ -0.78
COL4A5-208ENST00000505728 STK31Q9BXU1 1019 aa10.2□□□□□ -0.78
COL4A5-208ENST00000505728 ZBTB40Q9NUA8 1239 aa10.2□□□□□ -0.78
COL4A5-208ENST00000505728 PARP4Q9UKK3 1724 aaKnown RBP10.2□□□□□ -0.78
COL4A5-208ENST00000505728 VIRMAQ69YN4 1812 aaKnown RBP10.19□□□□□ -0.78
COL4A5-208ENST00000505728 SBF2Q86WG5 1849 aa10.19□□□□□ -0.78
COL4A5-208ENST00000505728 WNK3Q9BYP7 1800 aa10.19□□□□□ -0.78
COL4A5-208ENST00000505728 BTBD11A6QL63 1104 aa10.19□□□□□ -0.78
COL4A5-208ENST00000505728 ZBTB7BO15156 539 aaPredicted RBP10.19□□□□□ -0.78
COL4A5-208ENST00000505728 EIF4A1P60842 406 aaKnown RBP10.19□□□□□ -0.78
COL4A5-208ENST00000505728 HDAC1Q13547 482 aaPredicted RBP10.19□□□□□ -0.78
COL4A5-208ENST00000505728 INTS3Q68E01 1043 aaKnown RBP10.19□□□□□ -0.78
COL4A5-208ENST00000505728 CARD10Q9BWT7 1032 aa10.19□□□□□ -0.78
COL4A5-208ENST00000505728 STRN4Q9NRL3 753 aa10.19□□□□□ -0.78
COL4A5-208ENST00000505728 RBM19Q9Y4C8 960 aaKnown RBP10.19□□□□□ -0.78
COL4A5-208ENST00000505728 PHKG2P15735 406 aa10.18□□□□□ -0.78
COL4A5-208ENST00000505728 EVA1CP58658 441 aa10.18□□□□□ -0.78
COL4A5-208ENST00000505728 TOM1L2Q6ZVM7 507 aa10.18□□□□□ -0.78
COL4A5-208ENST00000505728 ADAMTS7Q9UKP4 1686 aa10.18□□□□□ -0.78
COL4A5-208ENST00000505728 KDM3BQ7LBC6 1761 aa10.17□□□□□ -0.78
COL4A5-208ENST00000505728 TRIM37O94972 964 aa10.17□□□□□ -0.78
COL4A5-208ENST00000505728 EZH2Q15910 746 aaKnown RBP10.17□□□□□ -0.78
COL4A5-208ENST00000505728 LARP1Q6PKG0 1096 aaKnown RBP10.17□□□□□ -0.78
COL4A5-208ENST00000505728 DCAF5Q96JK2 942 aa10.17□□□□□ -0.78
COL4A5-208ENST00000505728 USP35Q9P2H5 1018 aa10.17□□□□□ -0.78
COL4A5-208ENST00000505728 SCN11AQ9UI33 1791 aa10.16□□□□□ -0.78
COL4A5-208ENST00000505728 R3HDM1Q15032 1099 aaKnown RBP10.16□□□□□ -0.78
COL4A5-208ENST00000505728 HDGFL1Q5TGJ6 251 aa10.16□□□□□ -0.78
COL4A5-208ENST00000505728 ZCRB1Q8TBF4 217 aaKnown RBP10.16□□□□□ -0.78
COL4A5-208ENST00000505728 CAMKK2Q96RR4 588 aa10.16□□□□□ -0.78
COL4A5-208ENST00000505728 SLC52A2Q9HAB3 445 aa10.16□□□□□ -0.78
COL4A5-208ENST00000505728 MEGF6O75095 1541 aa10.16□□□□□ -0.78
COL4A5-208ENST00000505728 COL5A2P05997 1499 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms