RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 RGPD5Q99666 1765 aa10.47□□□□□ -0.73
VCAN-206ENST00000505615 KAT6BQ8WYB5 2073 aa10.47□□□□□ -0.73
VCAN-206ENST00000505615 MARCH10Q8NA82 808 aaPredicted RBP10.47□□□□□ -0.73
VCAN-206ENST00000505615 TMC2Q8TDI7 906 aa10.47□□□□□ -0.73
VCAN-206ENST00000505615 TRAK1Q9UPV9 953 aa10.47□□□□□ -0.73
VCAN-206ENST00000505615 PPP1R37O75864 691 aa10.46□□□□□ -0.73
VCAN-206ENST00000505615 DDB1Q16531 1140 aa10.46□□□□□ -0.73
VCAN-206ENST00000505615 GPR162Q16538 588 aa10.46□□□□□ -0.73
VCAN-206ENST00000505615 NUDT16Q96DE0 195 aaKnown RBP10.46□□□□□ -0.73
VCAN-206ENST00000505615 BTAF1O14981 1849 aa10.45□□□□□ -0.74
VCAN-206ENST00000505615 PPARGC1BQ86YN6 1023 aaKnown RBP10.45□□□□□ -0.74
VCAN-206ENST00000505615 AXIN2Q9Y2T1 843 aa10.45□□□□□ -0.74
VCAN-206ENST00000505615 SLIT3O75094 1523 aa10.44□□□□□ -0.74
VCAN-206ENST00000505615 ACEP12821 1306 aa10.44□□□□□ -0.74
VCAN-206ENST00000505615 GCP02774 474 aa10.44□□□□□ -0.74
VCAN-206ENST00000505615 ATP10DQ9P241 1426 aa10.43□□□□□ -0.74
VCAN-206ENST00000505615 MPHOSPH9Q99550 1183 aa10.43□□□□□ -0.74
VCAN-206ENST00000505615 HSPA6P17066 643 aa10.42□□□□□ -0.74
VCAN-206ENST00000505615 ZNF827Q17R98 1081 aa10.42□□□□□ -0.74
VCAN-206ENST00000505615 ABTB2Q8N961 1025 aa10.42□□□□□ -0.74
VCAN-206ENST00000505615 PTCD2Q8WV60 388 aaKnown RBP10.42□□□□□ -0.74
VCAN-206ENST00000505615 TRPM1Q7Z4N2 1603 aa10.41□□□□□ -0.74
VCAN-206ENST00000505615 PLEKHG3A1L390 1219 aa10.41□□□□□ -0.74
VCAN-206ENST00000505615 NLGN2Q8NFZ4 835 aa10.41□□□□□ -0.74
VCAN-206ENST00000505615 TNS2Q63HR2 1409 aa10.41□□□□□ -0.74
VCAN-206ENST00000505615 PIK3C2AO00443 1686 aa10.41□□□□□ -0.74
VCAN-206ENST00000505615 ADCY9O60503 1353 aa10.4□□□□□ -0.74
VCAN-206ENST00000505615 WDR17Q8IZU2 1322 aa10.4□□□□□ -0.74
VCAN-206ENST00000505615 YBX3P16989 372 aaKnown RBP eCLIP10.4□□□□□ -0.74
VCAN-206ENST00000505615 ADGRD1Q6QNK2 874 aa10.4□□□□□ -0.74
VCAN-206ENST00000505615 ABCC6O95255 1503 aa10.39□□□□□ -0.75
VCAN-206ENST00000505615 ARHGAP33O14559 1287 aa10.39□□□□□ -0.75
VCAN-206ENST00000505615 TOM1L2Q6ZVM7 507 aa10.39□□□□□ -0.75
VCAN-206ENST00000505615 NLRP13Q86W25 1043 aa10.39□□□□□ -0.75
VCAN-206ENST00000505615 FOXK1P85037 733 aa10.38□□□□□ -0.75
VCAN-206ENST00000505615 CDCA7Q9BWT1 371 aaPredicted RBP10.38□□□□□ -0.75
VCAN-206ENST00000505615 CDK19Q9BWU1 502 aa10.38□□□□□ -0.75
VCAN-206ENST00000505615 LRRC4BQ9NT99 713 aa10.38□□□□□ -0.75
VCAN-206ENST00000505615 CPSF1Q10570 1443 aaKnown RBP10.38□□□□□ -0.75
VCAN-206ENST00000505615 ZBTB7CA1YPR0 619 aa10.36□□□□□ -0.75
VCAN-206ENST00000505615 SLC16A10Q8TF71 515 aa10.36□□□□□ -0.75
VCAN-206ENST00000505615 CARD10Q9BWT7 1032 aa10.36□□□□□ -0.75
VCAN-206ENST00000505615 QRICH2Q9H0J4 1663 aa10.36□□□□□ -0.75
VCAN-206ENST00000505615 BRD4O60885 1362 aaPredicted RBP10.36□□□□□ -0.75
VCAN-206ENST00000505615 LY75O60449 1722 aa10.36□□□□□ -0.75
VCAN-206ENST00000505615 PNPLA7Q6ZV29 1317 aa10.35□□□□□ -0.75
VCAN-206ENST00000505615 USP6P35125 1406 aa10.35□□□□□ -0.75
VCAN-206ENST00000505615 PPIP5K1Q6PFW1 1433 aa10.35□□□□□ -0.75
VCAN-206ENST00000505615 NFAT5O94916 1531 aa10.35□□□□□ -0.75
VCAN-206ENST00000505615 TK2O00142 265 aa10.35□□□□□ -0.75
VCAN-206ENST00000505615 HRO43593 1189 aa10.35□□□□□ -0.75
VCAN-206ENST00000505615 GRIN3BO60391 1043 aa10.35□□□□□ -0.75
VCAN-206ENST00000505615 POLD1P28340 1107 aa10.34□□□□□ -0.75
VCAN-206ENST00000505615 ACSBG1Q96GR2 724 aa10.34□□□□□ -0.75
VCAN-206ENST00000505615 GPBP1L1Q9HC44 474 aaPredicted RBP10.34□□□□□ -0.75
VCAN-206ENST00000505615 GPHNQ9NQX3 736 aaPredicted RBP10.34□□□□□ -0.75
VCAN-206ENST00000505615 HCSTQ9UBK5 93 aa10.34□□□□□ -0.75
VCAN-206ENST00000505615 PCNTO95613 3336 aa10.33□□□□□ -0.76
VCAN-206ENST00000505615 EXOC5O00471 708 aa10.33□□□□□ -0.76
VCAN-206ENST00000505615 DMRTA1Q5VZB9 504 aa10.33□□□□□ -0.76
VCAN-206ENST00000505615 ARHGEF25Q86VW2 580 aa10.33□□□□□ -0.76
VCAN-206ENST00000505615 HS6ST3Q8IZP7 471 aa10.33□□□□□ -0.76
VCAN-206ENST00000505615 CCDC7Q96M83 1385 aa10.33□□□□□ -0.76
VCAN-206ENST00000505615 KIAA1210Q9ULL0 1709 aa10.33□□□□□ -0.76
VCAN-206ENST00000505615 PLPP6Q8IY26 295 aa10.32□□□□□ -0.76
VCAN-206ENST00000505615 PLA2G2EQ9NZK7 142 aa10.32□□□□□ -0.76
VCAN-206ENST00000505615 WDR90Q96KV7 1748 aa10.31□□□□□ -0.76
VCAN-206ENST00000505615 DNAJC5GQ8N7S2 189 aa10.31□□□□□ -0.76
VCAN-206ENST00000505615 ZNF526Q8TF50 670 aaPredicted RBP10.31□□□□□ -0.76
VCAN-206ENST00000505615 KDM2AQ9Y2K7 1162 aa10.31□□□□□ -0.76
VCAN-206ENST00000505615 PSEN2P49810 448 aa10.3□□□□□ -0.76
VCAN-206ENST00000505615 DSG2Q14126 1118 aa10.3□□□□□ -0.76
VCAN-206ENST00000505615 DOT1LQ8TEK3 1739 aa10.3□□□□□ -0.76
VCAN-206ENST00000505615 USP54Q70EL1 1684 aa10.29□□□□□ -0.76
VCAN-206ENST00000505615 CSB-PGBD3P0DP91 1061 aa10.29□□□□□ -0.76
VCAN-206ENST00000505615 SLC27A3Q5K4L6 730 aa10.29□□□□□ -0.76
VCAN-206ENST00000505615 DCAF11Q8TEB1 546 aa10.29□□□□□ -0.76
VCAN-206ENST00000505615 CICQ96RK0 1608 aaPredicted RBP10.29□□□□□ -0.76
VCAN-206ENST00000505615 LTN1O94822 1766 aa10.29□□□□□ -0.76
VCAN-206ENST00000505615 APLP1P51693 650 aa10.28□□□□□ -0.76
VCAN-206ENST00000505615 PPP4R3BQ5MIZ7 849 aa10.28□□□□□ -0.76
VCAN-206ENST00000505615 COL13A1Q5TAT6 717 aaPredicted RBP10.28□□□□□ -0.76
VCAN-206ENST00000505615 KCNQ4P56696 695 aa10.27□□□□□ -0.77
VCAN-206ENST00000505615 TFCP2L1Q9NZI6 479 aa10.27□□□□□ -0.77
VCAN-206ENST00000505615 TAF1LQ8IZX4 1826 aa10.27□□□□□ -0.77
VCAN-206ENST00000505615 NSD2O96028 1365 aa10.26□□□□□ -0.77
VCAN-206ENST00000505615 SRPK2P78362 688 aaKnown RBP10.26□□□□□ -0.77
VCAN-206ENST00000505615 STAC3Q96MF2 364 aa10.26□□□□□ -0.77
VCAN-206ENST00000505615 C5P01031 1676 aa10.25□□□□□ -0.77
VCAN-206ENST00000505615 MSL1Q68DK7 614 aa10.25□□□□□ -0.77
VCAN-206ENST00000505615 COL23A1Q86Y22 540 aaPredicted RBP10.25□□□□□ -0.77
VCAN-206ENST00000505615 CABP1Q9NZU7 370 aa10.25□□□□□ -0.77
VCAN-206ENST00000505615 TTC21BQ7Z4L5 1316 aa10.25□□□□□ -0.77
VCAN-206ENST00000505615 MON2Q7Z3U7 1717 aa10.24□□□□□ -0.77
VCAN-206ENST00000505615 TOGARAM1Q9Y4F4 1720 aa10.24□□□□□ -0.77
VCAN-206ENST00000505615 IL2RBP14784 551 aa10.24□□□□□ -0.77
VCAN-206ENST00000505615 PRELPP51888 382 aa10.24□□□□□ -0.77
VCAN-206ENST00000505615 KCNH5Q8NCM2 988 aa10.24□□□□□ -0.77
VCAN-206ENST00000505615 CD2APQ9Y5K6 639 aa10.24□□□□□ -0.77
VCAN-206ENST00000505615 FAM208AQ9UK61 1670 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms