RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 PPM1GO15355 546 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-219ENST00000505392 CAPN15O75808 1086 aa16.19■□□□□ 0.18
CCHCR1-219ENST00000505392 C9orf131Q5VYM1 1079 aa16.19■□□□□ 0.18
CCHCR1-219ENST00000505392 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
CCHCR1-219ENST00000505392 CCDC87Q9NVE4 849 aa16.18■□□□□ 0.18
CCHCR1-219ENST00000505392 EMILIN1Q9Y6C2 1016 aa16.18■□□□□ 0.18
CCHCR1-219ENST00000505392 TOGARAM1Q9Y4F4 1720 aa16.17■□□□□ 0.18
CCHCR1-219ENST00000505392 JMYQ8N9B5 988 aa16.17■□□□□ 0.18
CCHCR1-219ENST00000505392 ARHGEF1Q92888 912 aaKnown RBP16.17■□□□□ 0.18
CCHCR1-219ENST00000505392 UBR3Q6ZT12 1888 aa16.16■□□□□ 0.18
CCHCR1-219ENST00000505392 KIF24Q5T7B8 1368 aa16.16■□□□□ 0.18
CCHCR1-219ENST00000505392 KCNA3P22001 575 aa16.16■□□□□ 0.18
CCHCR1-219ENST00000505392 FSTL1Q12841 308 aa16.16■□□□□ 0.18
CCHCR1-219ENST00000505392 IFNL2Q8IZJ0 200 aa16.16■□□□□ 0.18
CCHCR1-219ENST00000505392 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCHCR1-219ENST00000505392 PARP3Q9Y6F1 533 aa16.16■□□□□ 0.18
CCHCR1-219ENST00000505392 PHKG2P15735 406 aa16.15■□□□□ 0.18
CCHCR1-219ENST00000505392 RFC4P35249 363 aa16.15■□□□□ 0.18
CCHCR1-219ENST00000505392 EYA1Q99502 592 aa16.15■□□□□ 0.18
CCHCR1-219ENST00000505392 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
CCHCR1-219ENST00000505392 RRAGCQ9HB90 399 aa16.15■□□□□ 0.18
CCHCR1-219ENST00000505392 CICQ96RK0 1608 aaPredicted RBP16.15■□□□□ 0.18
CCHCR1-219ENST00000505392 TONSLQ96HA7 1378 aa16.14■□□□□ 0.17
CCHCR1-219ENST00000505392 GYS1P13807 737 aa16.14■□□□□ 0.17
CCHCR1-219ENST00000505392 TNS4Q8IZW8 715 aa16.14■□□□□ 0.17
CCHCR1-219ENST00000505392 SLC4A9Q96Q91 983 aa16.14■□□□□ 0.17
CCHCR1-219ENST00000505392 PIM2Q9P1W9 311 aa16.14■□□□□ 0.17
CCHCR1-219ENST00000505392 ITGB4P16144 1822 aa16.13■□□□□ 0.17
CCHCR1-219ENST00000505392 RC3H1Q5TC82 1133 aaKnown RBP16.13■□□□□ 0.17
CCHCR1-219ENST00000505392 KDM2BQ8NHM5 1336 aa16.13■□□□□ 0.17
CCHCR1-219ENST00000505392 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
CCHCR1-219ENST00000505392 ADRA2BP18089 450 aa16.12■□□□□ 0.17
CCHCR1-219ENST00000505392 RNF181Q9P0P0 153 aa16.12■□□□□ 0.17
CCHCR1-219ENST00000505392 C10orf71Q711Q0 1435 aa16.11■□□□□ 0.17
CCHCR1-219ENST00000505392 MAP2P11137 1827 aaKnown RBP16.11■□□□□ 0.17
CCHCR1-219ENST00000505392 PRELPP51888 382 aa16.11■□□□□ 0.17
CCHCR1-219ENST00000505392 DALRD3Q5D0E6 543 aaKnown RBP16.11■□□□□ 0.17
CCHCR1-219ENST00000505392 CARD14Q9BXL6 1004 aa16.11■□□□□ 0.17
CCHCR1-219ENST00000505392 WASHC2AQ641Q2 1341 aa16.11■□□□□ 0.17
CCHCR1-219ENST00000505392 DCAF5Q96JK2 942 aa16.1■□□□□ 0.17
CCHCR1-219ENST00000505392 N4BP2Q86UW6 1770 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-219ENST00000505392 PLEKHG2Q9H7P9 1386 aa16.09■□□□□ 0.17
CCHCR1-219ENST00000505392 ERVV-2B6SEH9 535 aa16.08■□□□□ 0.16
CCHCR1-219ENST00000505392 SMC1BQ8NDV3 1235 aa16.08■□□□□ 0.16
CCHCR1-219ENST00000505392 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.16
CCHCR1-219ENST00000505392 KCPQ6ZWJ8 1503 aa16.08■□□□□ 0.16
CCHCR1-219ENST00000505392 CHRNA5P30532 468 aa16.07■□□□□ 0.16
CCHCR1-219ENST00000505392 CDCA8Q53HL2 280 aa16.07■□□□□ 0.16
CCHCR1-219ENST00000505392 NCAPD2Q15021 1401 aa16.07■□□□□ 0.16
CCHCR1-219ENST00000505392 WDR90Q96KV7 1748 aa16.07■□□□□ 0.16
CCHCR1-219ENST00000505392 KIF13BQ9NQT8 1826 aa16.06■□□□□ 0.16
CCHCR1-219ENST00000505392 KIAA1551Q9HCM1 1747 aa16.06■□□□□ 0.16
CCHCR1-219ENST00000505392 KDRP35968 1356 aa16.06■□□□□ 0.16
CCHCR1-219ENST00000505392 FKBP8Q14318 412 aa16.06■□□□□ 0.16
CCHCR1-219ENST00000505392 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
CCHCR1-219ENST00000505392 SRP68Q9UHB9 627 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-219ENST00000505392 PKD1L3Q7Z443 1732 aa16.05■□□□□ 0.16
CCHCR1-219ENST00000505392 PCNTO95613 3336 aa16.05■□□□□ 0.16
CCHCR1-219ENST00000505392 PTCD1O75127 700 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-219ENST00000505392 CABP4P57796 275 aa16.05■□□□□ 0.16
CCHCR1-219ENST00000505392 HSP90AB1P08238 724 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-219ENST00000505392 DDR1Q08345 913 aa16.04■□□□□ 0.16
CCHCR1-219ENST00000505392 EIF4A2Q14240 407 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-219ENST00000505392 HSPA1AP0DMV8 641 aaKnown RBP16.03■□□□□ 0.16
CCHCR1-219ENST00000505392 HSPA1BP0DMV9 641 aaKnown RBP16.03■□□□□ 0.16
CCHCR1-219ENST00000505392 CRKLP46109 303 aaKnown RBP16.03■□□□□ 0.16
CCHCR1-219ENST00000505392 VEGFAP15692 232 aaPredicted RBP16.02■□□□□ 0.16
CCHCR1-219ENST00000505392 PLEKHO1Q53GL0 409 aaPredicted RBP16.02■□□□□ 0.16
CCHCR1-219ENST00000505392 C4AP0C0L4 1744 aa16.02■□□□□ 0.15
CCHCR1-219ENST00000505392 USP42Q9H9J4 1324 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-219ENST00000505392 GLTPD2A6NH11 291 aa16.01■□□□□ 0.15
CCHCR1-219ENST00000505392 TM4SF1P30408 202 aa16.01■□□□□ 0.15
CCHCR1-219ENST00000505392 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-219ENST00000505392 RASSF7Q02833 373 aa16.01■□□□□ 0.15
CCHCR1-219ENST00000505392 POLRMTO00411 1230 aaKnown RBP16■□□□□ 0.15
CCHCR1-219ENST00000505392 MTHFSP49914 203 aa16■□□□□ 0.15
CCHCR1-219ENST00000505392 NFATC2IPQ8NCF5 419 aa16■□□□□ 0.15
CCHCR1-219ENST00000505392 LMNB1P20700 586 aa15.99■□□□□ 0.15
CCHCR1-219ENST00000505392 ZNF530Q6P9A1 599 aaPredicted RBP15.99■□□□□ 0.15
CCHCR1-219ENST00000505392 ZPR1O75312 459 aa15.98■□□□□ 0.15
CCHCR1-219ENST00000505392 AMOTQ4VCS5 1084 aa15.98■□□□□ 0.15
CCHCR1-219ENST00000505392 USPL1Q5W0Q7 1092 aa15.98■□□□□ 0.15
CCHCR1-219ENST00000505392 INTS5Q6P9B9 1019 aaKnown RBP15.98■□□□□ 0.15
CCHCR1-219ENST00000505392 ZC3H4Q9UPT8 1303 aaKnown RBP15.97■□□□□ 0.15
CCHCR1-219ENST00000505392 BRCA1P38398 1863 aaKnown RBP15.97■□□□□ 0.15
CCHCR1-219ENST00000505392 KIF20BQ96Q89 1820 aa15.96■□□□□ 0.15
CCHCR1-219ENST00000505392 C1orf141Q5JVX7 400 aa15.96■□□□□ 0.15
CCHCR1-219ENST00000505392 ARFGEF1Q9Y6D6 1849 aa15.96■□□□□ 0.14
CCHCR1-219ENST00000505392 TTLL6Q8N841 843 aa15.95■□□□□ 0.14
CCHCR1-219ENST00000505392 KDM6AO15550 1401 aaPredicted RBP15.94■□□□□ 0.14
CCHCR1-219ENST00000505392 POTECB2RU33 542 aa15.94■□□□□ 0.14
CCHCR1-219ENST00000505392 NFIXQ14938 502 aa15.94■□□□□ 0.14
CCHCR1-219ENST00000505392 DPY19L2Q6NUT2 758 aa15.94■□□□□ 0.14
CCHCR1-219ENST00000505392 MYH14Q7Z406 1995 aaKnown RBP15.94■□□□□ 0.14
CCHCR1-219ENST00000505392 DNAJC10Q8IXB1 793 aa15.93■□□□□ 0.14
CCHCR1-219ENST00000505392 ZNF831Q5JPB2 1677 aa15.92■□□□□ 0.14
CCHCR1-219ENST00000505392 SERPINB2P05120 415 aa15.92■□□□□ 0.14
CCHCR1-219ENST00000505392 C2CD5Q86YS7 1000 aa15.92■□□□□ 0.14
CCHCR1-219ENST00000505392 POLR3GLQ9BT43 218 aa15.92■□□□□ 0.14
CCHCR1-219ENST00000505392 NARFQ9UHQ1 456 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms