RNA–Protein interactions for RNA: ENST00000505368.1

RAB5CP2-201, Transcript of RAB5C, member RAS oncogene family pseudogene 2, humanhuman

BASIC

Gene RAB5CP2, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP2-201ENST00000505368 GNPATO15228 680 aa12.69□□□□□ -0.38
RAB5CP2-201ENST00000505368 MTHFSDQ2M296 383 aaKnown RBP12.69□□□□□ -0.38
RAB5CP2-201ENST00000505368 PLEKHG2Q9H7P9 1386 aa12.69□□□□□ -0.38
RAB5CP2-201ENST00000505368 MAP2P11137 1827 aaKnown RBP12.68□□□□□ -0.38
RAB5CP2-201ENST00000505368 YBX3P16989 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
RAB5CP2-201ENST00000505368 POLD1P28340 1107 aa12.68□□□□□ -0.38
RAB5CP2-201ENST00000505368 CABP4P57796 275 aa12.68□□□□□ -0.38
RAB5CP2-201ENST00000505368 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
RAB5CP2-201ENST00000505368 NFATC2IPQ8NCF5 419 aa12.68□□□□□ -0.38
RAB5CP2-201ENST00000505368 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
RAB5CP2-201ENST00000505368 C4BP0C0L5 1744 aa12.68□□□□□ -0.38
RAB5CP2-201ENST00000505368 NPC1L1Q9UHC9 1359 aa12.68□□□□□ -0.38
RAB5CP2-201ENST00000505368 PTCD1O75127 700 aaKnown RBP12.67□□□□□ -0.38
RAB5CP2-201ENST00000505368 WWC3Q9ULE0 1092 aa12.67□□□□□ -0.38
RAB5CP2-201ENST00000505368 DIAPH1O60610 1272 aaKnown RBP12.66□□□□□ -0.38
RAB5CP2-201ENST00000505368 SLC39A6Q13433 755 aa12.66□□□□□ -0.38
RAB5CP2-201ENST00000505368 C5P01031 1676 aa12.65□□□□□ -0.38
RAB5CP2-201ENST00000505368 RNMTO43148 476 aaKnown RBP12.65□□□□□ -0.38
RAB5CP2-201ENST00000505368 HSP90AB1P08238 724 aaKnown RBP12.65□□□□□ -0.38
RAB5CP2-201ENST00000505368 SSFA2P28290 1259 aa12.65□□□□□ -0.38
RAB5CP2-201ENST00000505368 AKAP4Q5JQC9 854 aa12.65□□□□□ -0.38
RAB5CP2-201ENST00000505368 C1orf141Q5JVX7 400 aa12.65□□□□□ -0.38
RAB5CP2-201ENST00000505368 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
RAB5CP2-201ENST00000505368 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
RAB5CP2-201ENST00000505368 SRP68Q9UHB9 627 aaKnown RBP12.64□□□□□ -0.39
RAB5CP2-201ENST00000505368 COL24A1Q17RW2 1714 aa12.64□□□□□ -0.39
RAB5CP2-201ENST00000505368 QSER1Q2KHR3 1735 aa12.63□□□□□ -0.39
RAB5CP2-201ENST00000505368 U2SURPO15042 1029 aaKnown RBP12.63□□□□□ -0.39
RAB5CP2-201ENST00000505368 PPP2R1AP30153 589 aa12.63□□□□□ -0.39
RAB5CP2-201ENST00000505368 INTS5Q6P9B9 1019 aaKnown RBP12.63□□□□□ -0.39
RAB5CP2-201ENST00000505368 DNAJC10Q8IXB1 793 aa12.63□□□□□ -0.39
RAB5CP2-201ENST00000505368 ARHGEF1Q92888 912 aaKnown RBP12.63□□□□□ -0.39
RAB5CP2-201ENST00000505368 SLC52A2Q9HAB3 445 aa12.63□□□□□ -0.39
RAB5CP2-201ENST00000505368 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
RAB5CP2-201ENST00000505368 ITGB4P16144 1822 aa12.62□□□□□ -0.39
RAB5CP2-201ENST00000505368 MRC1P22897 1456 aa12.62□□□□□ -0.39
RAB5CP2-201ENST00000505368 CRKLP46109 303 aaKnown RBP12.62□□□□□ -0.39
RAB5CP2-201ENST00000505368 GPR162Q16538 588 aa12.62□□□□□ -0.39
RAB5CP2-201ENST00000505368 ZNF784Q8NCA9 323 aaPredicted RBP12.62□□□□□ -0.39
RAB5CP2-201ENST00000505368 FLAD1Q8NFF5 587 aa12.62□□□□□ -0.39
RAB5CP2-201ENST00000505368 IL17REQ8NFR9 667 aa12.62□□□□□ -0.39
RAB5CP2-201ENST00000505368 KAT6BQ8WYB5 2073 aa12.61□□□□□ -0.39
RAB5CP2-201ENST00000505368 MMP10P09238 476 aa12.61□□□□□ -0.39
RAB5CP2-201ENST00000505368 GYS1P13807 737 aa12.61□□□□□ -0.39
RAB5CP2-201ENST00000505368 RSPH6AQ9H0K4 717 aa12.61□□□□□ -0.39
RAB5CP2-201ENST00000505368 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
RAB5CP2-201ENST00000505368 KCNQ3O43525 872 aa12.6□□□□□ -0.39
RAB5CP2-201ENST00000505368 RPS6KA4O75676 772 aa12.6□□□□□ -0.39
RAB5CP2-201ENST00000505368 PRKAR2BP31323 418 aa12.6□□□□□ -0.39
RAB5CP2-201ENST00000505368 RTCBQ9Y3I0 505 aaKnown RBP12.6□□□□□ -0.39
RAB5CP2-201ENST00000505368 KCPQ6ZWJ8 1503 aa12.6□□□□□ -0.39
RAB5CP2-201ENST00000505368 DDR1Q08345 913 aa12.59□□□□□ -0.39
RAB5CP2-201ENST00000505368 FKBP8Q14318 412 aa12.59□□□□□ -0.39
RAB5CP2-201ENST00000505368 TRAPPC3LQ5T215 181 aa12.59□□□□□ -0.39
RAB5CP2-201ENST00000505368 RC3H1Q5TC82 1133 aaKnown RBP12.59□□□□□ -0.39
RAB5CP2-201ENST00000505368 CD2APQ9Y5K6 639 aa12.59□□□□□ -0.39
RAB5CP2-201ENST00000505368 TAF1LQ8IZX4 1826 aa12.58□□□□□ -0.4
RAB5CP2-201ENST00000505368 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
RAB5CP2-201ENST00000505368 CYP19A1P11511 503 aaPredicted RBP12.58□□□□□ -0.4
RAB5CP2-201ENST00000505368 ZBTB1Q9Y2K1 713 aa12.58□□□□□ -0.4
RAB5CP2-201ENST00000505368 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
RAB5CP2-201ENST00000505368 BCL2L12Q9HB09 334 aa12.57□□□□□ -0.4
RAB5CP2-201ENST00000505368 PXDNLA1KZ92 1463 aa12.57□□□□□ -0.4
RAB5CP2-201ENST00000505368 SOS1Q07889 1333 aaPredicted RBP12.57□□□□□ -0.4
RAB5CP2-201ENST00000505368 DCTN1Q14203 1278 aa12.56□□□□□ -0.4
RAB5CP2-201ENST00000505368 USP42Q9H9J4 1324 aaKnown RBP12.56□□□□□ -0.4
RAB5CP2-201ENST00000505368 C10orf71Q711Q0 1435 aa12.55□□□□□ -0.4
RAB5CP2-201ENST00000505368 ADAMTS7Q9UKP4 1686 aa12.55□□□□□ -0.4
RAB5CP2-201ENST00000505368 TJP1Q07157 1748 aa12.55□□□□□ -0.4
RAB5CP2-201ENST00000505368 PRAMEF22A3QJZ6 481 aa12.55□□□□□ -0.4
RAB5CP2-201ENST00000505368 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
RAB5CP2-201ENST00000505368 ADRA2BP18089 450 aa12.55□□□□□ -0.4
RAB5CP2-201ENST00000505368 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
RAB5CP2-201ENST00000505368 ZNF496Q96IT1 587 aaPredicted RBP12.55□□□□□ -0.4
RAB5CP2-201ENST00000505368 CCDC87Q9NVE4 849 aa12.55□□□□□ -0.4
RAB5CP2-201ENST00000505368 CEMIPQ8WUJ3 1361 aa12.55□□□□□ -0.4
RAB5CP2-201ENST00000505368 CICQ96RK0 1608 aaPredicted RBP12.55□□□□□ -0.4
RAB5CP2-201ENST00000505368 A0A0G2JLW4 131 aa12.54□□□□□ -0.4
RAB5CP2-201ENST00000505368 GNAT3A8MTJ3 354 aa12.54□□□□□ -0.4
RAB5CP2-201ENST00000505368 RFC4P35249 363 aa12.54□□□□□ -0.4
RAB5CP2-201ENST00000505368 USPL1Q5W0Q7 1092 aa12.54□□□□□ -0.4
RAB5CP2-201ENST00000505368 MCM10Q7L590 875 aa12.54□□□□□ -0.4
RAB5CP2-201ENST00000505368 GAS2L2Q8NHY3 880 aa12.54□□□□□ -0.4
RAB5CP2-201ENST00000505368 DPEP1P16444 411 aa12.53□□□□□ -0.4
RAB5CP2-201ENST00000505368 KCNA3P22001 575 aa12.53□□□□□ -0.4
RAB5CP2-201ENST00000505368 PIP4K2AP48426 406 aaPredicted RBP12.53□□□□□ -0.4
RAB5CP2-201ENST00000505368 COL5A3P25940 1745 aaPredicted RBP12.52□□□□□ -0.41
RAB5CP2-201ENST00000505368 POLRMTO00411 1230 aaKnown RBP12.52□□□□□ -0.41
RAB5CP2-201ENST00000505368 CANXP27824 592 aaKnown RBP12.52□□□□□ -0.41
RAB5CP2-201ENST00000505368 NLGN1Q8N2Q7 840 aa12.52□□□□□ -0.41
RAB5CP2-201ENST00000505368 TM4SF1P30408 202 aa12.51□□□□□ -0.41
RAB5CP2-201ENST00000505368 CHRNA5P30532 468 aa12.51□□□□□ -0.41
RAB5CP2-201ENST00000505368 ZNF790Q6PG37 636 aa12.51□□□□□ -0.41
RAB5CP2-201ENST00000505368 CFAP53Q96M91 514 aa12.51□□□□□ -0.41
RAB5CP2-201ENST00000505368 CARMIL3Q8ND23 1372 aa12.51□□□□□ -0.41
RAB5CP2-201ENST00000505368 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
RAB5CP2-201ENST00000505368 SLC34A2O95436 690 aa12.5□□□□□ -0.41
RAB5CP2-201ENST00000505368 A1BGP04217 495 aa12.5□□□□□ -0.41
RAB5CP2-201ENST00000505368 EIF5P55010 431 aaKnown RBP12.5□□□□□ -0.41
RAB5CP2-201ENST00000505368 NFIXQ14938 502 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms