RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 NFE2L2Q16236 605 aa6.57□□□□□ -1.36
LMNB1-208ENST00000504788 CCDC27Q2M243 656 aa6.57□□□□□ -1.36
LMNB1-208ENST00000504788 AKAP4Q5JQC9 854 aa6.57□□□□□ -1.36
LMNB1-208ENST00000504788 KRT27Q7Z3Y8 459 aa6.57□□□□□ -1.36
LMNB1-208ENST00000504788 IFNL2Q8IZJ0 200 aa6.57□□□□□ -1.36
LMNB1-208ENST00000504788 PLSCR2Q9NRY7 297 aa6.57□□□□□ -1.36
LMNB1-208ENST00000504788 KCPQ6ZWJ8 1503 aa6.57□□□□□ -1.36
LMNB1-208ENST00000504788 COL5A3P25940 1745 aaPredicted RBP6.57□□□□□ -1.36
LMNB1-208ENST00000504788 TJP1Q07157 1748 aa6.57□□□□□ -1.36
LMNB1-208ENST00000504788 KCNQ2O43526 872 aa6.57□□□□□ -1.36
LMNB1-208ENST00000504788 WDR43Q15061 677 aaKnown RBP eCLIP6.57□□□□□ -1.366e-11■■■□□ 18.3
LMNB1-208ENST00000504788 PLEKHO1Q53GL0 409 aaPredicted RBP6.57□□□□□ -1.36
LMNB1-208ENST00000504788 FAM9BQ8IZU0 186 aa6.57□□□□□ -1.36
LMNB1-208ENST00000504788 SPG7Q9UQ90 795 aa6.57□□□□□ -1.36
LMNB1-208ENST00000504788 HEG1Q9ULI3 1381 aa6.56□□□□□ -1.36
LMNB1-208ENST00000504788 C5P01031 1676 aa6.56□□□□□ -1.36
LMNB1-208ENST00000504788 RNMTO43148 476 aaKnown RBP6.56□□□□□ -1.36
LMNB1-208ENST00000504788 HTATSF1O43719 755 aaKnown RBP6.56□□□□□ -1.36
LMNB1-208ENST00000504788 ZNF853P0CG23 659 aa6.56□□□□□ -1.36
LMNB1-208ENST00000504788 EVX2Q03828 476 aa6.56□□□□□ -1.36
LMNB1-208ENST00000504788 DCTN1Q14203 1278 aa6.56□□□□□ -1.36
LMNB1-208ENST00000504788 ZNF530Q6P9A1 599 aaPredicted RBP6.56□□□□□ -1.36
LMNB1-208ENST00000504788 MPRIPQ6WCQ1 1025 aa6.56□□□□□ -1.36
LMNB1-208ENST00000504788 GAS2L2Q8NHY3 880 aa6.56□□□□□ -1.36
LMNB1-208ENST00000504788 DDX54Q8TDD1 881 aaKnown RBP6.56□□□□□ -1.36
LMNB1-208ENST00000504788 DCAF5Q96JK2 942 aa6.56□□□□□ -1.36
LMNB1-208ENST00000504788 KAT6BQ8WYB5 2073 aa6.56□□□□□ -1.36
LMNB1-208ENST00000504788 MYH14Q7Z406 1995 aaKnown RBP6.55□□□□□ -1.36
LMNB1-208ENST00000504788 GNAT3A8MTJ3 354 aa6.55□□□□□ -1.36
LMNB1-208ENST00000504788 WWC1Q8IX03 1113 aa6.55□□□□□ -1.36
LMNB1-208ENST00000504788 THUMPD2Q9BTF0 503 aaKnown RBP6.55□□□□□ -1.36
LMNB1-208ENST00000504788 RRP7AQ9Y3A4 280 aaKnown RBP6.55□□□□□ -1.36
LMNB1-208ENST00000504788 NUP188Q5SRE5 1749 aa6.55□□□□□ -1.36
LMNB1-208ENST00000504788 ERVV-2B6SEH9 535 aa6.55□□□□□ -1.36
LMNB1-208ENST00000504788 RIPK4P57078 832 aa6.55□□□□□ -1.36
LMNB1-208ENST00000504788 PDE3BQ13370 1112 aa6.55□□□□□ -1.36
LMNB1-208ENST00000504788 MCM10Q7L590 875 aa6.55□□□□□ -1.36
LMNB1-208ENST00000504788 PIGBQ92521 554 aa6.55□□□□□ -1.36
LMNB1-208ENST00000504788 SLC4A9Q96Q91 983 aa6.55□□□□□ -1.36
LMNB1-208ENST00000504788 SENP3-EIF4A1A0A087X0R7 540 aa6.54□□□□□ -1.36
LMNB1-208ENST00000504788 PRIM1P49642 420 aaKnown RBP6.54□□□□□ -1.36
LMNB1-208ENST00000504788 FAM196AQ6ZSG2 479 aa6.54□□□□□ -1.36
LMNB1-208ENST00000504788 TRMT2AQ8IZ69 625 aaKnown RBP6.54□□□□□ -1.36
LMNB1-208ENST00000504788 PROM2Q8N271 834 aa6.54□□□□□ -1.36
LMNB1-208ENST00000504788 NFATC2IPQ8NCF5 419 aa6.54□□□□□ -1.36
LMNB1-208ENST00000504788 PNNQ9H307 717 aaKnown RBP6.54□□□□□ -1.36
LMNB1-208ENST00000504788 SLC52A2Q9HAB3 445 aa6.54□□□□□ -1.36
LMNB1-208ENST00000504788 TUBGCP6Q96RT7 1819 aa6.54□□□□□ -1.36
LMNB1-208ENST00000504788 LAMB4A4D0S4 1761 aa6.53□□□□□ -1.36
LMNB1-208ENST00000504788 BCL11BQ9C0K0 894 aaPredicted RBP6.53□□□□□ -1.36
LMNB1-208ENST00000504788 MAPK8IP3Q9UPT6 1336 aa6.53□□□□□ -1.36
LMNB1-208ENST00000504788 CHL1O00533 1208 aa6.53□□□□□ -1.36
LMNB1-208ENST00000504788 KCNQ3O43525 872 aa6.53□□□□□ -1.36
LMNB1-208ENST00000504788 HSP90AB1P08238 724 aaKnown RBP6.53□□□□□ -1.36
LMNB1-208ENST00000504788 UPF1Q92900 1129 aaKnown RBP eCLIP6.53□□□□□ -1.36
LMNB1-208ENST00000504788 ACSBG1Q96GR2 724 aa6.53□□□□□ -1.36
LMNB1-208ENST00000504788 ATG3Q9NT62 314 aa6.53□□□□□ -1.36
LMNB1-208ENST00000504788 ASAP1Q9ULH1 1129 aa6.53□□□□□ -1.36
LMNB1-208ENST00000504788 SRCAPQ6ZRS2 3230 aa6.52□□□□□ -1.37
LMNB1-208ENST00000504788 TRIM37O94972 964 aa6.52□□□□□ -1.37
LMNB1-208ENST00000504788 NEUROD2Q15784 382 aa6.52□□□□□ -1.37
LMNB1-208ENST00000504788 C1orf141Q5JVX7 400 aa6.52□□□□□ -1.37
LMNB1-208ENST00000504788 NGEFQ8N5V2 710 aa6.52□□□□□ -1.37
LMNB1-208ENST00000504788 UBR3Q6ZT12 1888 aa6.52□□□□□ -1.37
LMNB1-208ENST00000504788 QSER1Q2KHR3 1735 aa6.52□□□□□ -1.37
LMNB1-208ENST00000504788 IL16Q14005 1332 aa6.51□□□□□ -1.37
LMNB1-208ENST00000504788 A0A0G2JS52 829 aa6.51□□□□□ -1.37
LMNB1-208ENST00000504788 PLSCR1O15162 318 aa6.51□□□□□ -1.37
LMNB1-208ENST00000504788 MYT1Q01538 1121 aa6.51□□□□□ -1.37
LMNB1-208ENST00000504788 CFAP44Q96MT7 982 aa6.51□□□□□ -1.37
LMNB1-208ENST00000504788 CAMKK2Q96RR4 588 aa6.51□□□□□ -1.37
LMNB1-208ENST00000504788 LRRC4BQ9NT99 713 aa6.51□□□□□ -1.37
LMNB1-208ENST00000504788 ZBED9Q6R2W3 1325 aa6.51□□□□□ -1.37
LMNB1-208ENST00000504788 C4BP0C0L5 1744 aa6.51□□□□□ -1.37
LMNB1-208ENST00000504788 SLC39A6Q13433 755 aa6.5□□□□□ -1.37
LMNB1-208ENST00000504788 TAF7Q15545 349 aaPredicted RBP6.5□□□□□ -1.37
LMNB1-208ENST00000504788 ZNF790Q6PG37 636 aa6.5□□□□□ -1.37
LMNB1-208ENST00000504788 WDR63Q8IWG1 891 aa6.5□□□□□ -1.37
LMNB1-208ENST00000504788 CDCA7LQ96GN5 454 aa6.5□□□□□ -1.37
LMNB1-208ENST00000504788 ZNF496Q96IT1 587 aaPredicted RBP6.5□□□□□ -1.37
LMNB1-208ENST00000504788 BABAM1Q9NWV8 329 aa6.5□□□□□ -1.37
LMNB1-208ENST00000504788 MIS18AQ9NYP9 233 aa6.5□□□□□ -1.37
LMNB1-208ENST00000504788 COL24A1Q17RW2 1714 aa6.5□□□□□ -1.37
LMNB1-208ENST00000504788 PALLDQ8WX93 1383 aa6.5□□□□□ -1.37
LMNB1-208ENST00000504788 EIF4A1P60842 406 aaKnown RBP6.5□□□□□ -1.37
LMNB1-208ENST00000504788 MBIPQ9NS73 344 aa6.5□□□□□ -1.37
LMNB1-208ENST00000504788 IFT57Q9NWB7 429 aa6.5□□□□□ -1.37
LMNB1-208ENST00000504788 C4AP0C0L4 1744 aa6.5□□□□□ -1.37
LMNB1-208ENST00000504788 PRAMEF22A3QJZ6 481 aa6.49□□□□□ -1.37
LMNB1-208ENST00000504788 GABBR2O75899 941 aa6.49□□□□□ -1.37
LMNB1-208ENST00000504788 CABP4P57796 275 aa6.49□□□□□ -1.37
LMNB1-208ENST00000504788 SLFN5Q08AF3 891 aa6.49□□□□□ -1.37
LMNB1-208ENST00000504788 LMOD3Q0VAK6 560 aa6.49□□□□□ -1.37
LMNB1-208ENST00000504788 ITPK1Q13572 414 aa6.49□□□□□ -1.37
LMNB1-208ENST00000504788 KRT24Q2M2I5 525 aa6.49□□□□□ -1.37
LMNB1-208ENST00000504788 DUSP27Q5VZP5 1158 aa6.49□□□□□ -1.37
LMNB1-208ENST00000504788 LRP10Q7Z4F1 713 aa6.49□□□□□ -1.37
LMNB1-208ENST00000504788 AMIGO3Q86WK7 504 aa6.49□□□□□ -1.37
LMNB1-208ENST00000504788 TMOD3Q9NYL9 352 aa6.49□□□□□ -1.37
LMNB1-208ENST00000504788 CACNA1FO60840 1977 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms