RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
PDGFC-204ENST00000504672 HSPA1AP0DMV8 641 aaKnown RBP12.73□□□□□ -0.37
PDGFC-204ENST00000504672 HSPA1BP0DMV9 641 aaKnown RBP12.73□□□□□ -0.37
PDGFC-204ENST00000504672 ATG3Q9NT62 314 aa12.73□□□□□ -0.37
PDGFC-204ENST00000504672 CCDC87Q9NVE4 849 aa12.73□□□□□ -0.37
PDGFC-204ENST00000504672 RGPD2P0DJD1 1756 aa12.73□□□□□ -0.37
PDGFC-204ENST00000504672 KDM2BQ8NHM5 1336 aa12.72□□□□□ -0.37
PDGFC-204ENST00000504672 PPM1GO15355 546 aaPredicted RBP12.72□□□□□ -0.37
PDGFC-204ENST00000504672 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
PDGFC-204ENST00000504672 RNF39Q9H2S5 420 aa12.72□□□□□ -0.37
PDGFC-204ENST00000504672 PIM2Q9P1W9 311 aa12.72□□□□□ -0.37
PDGFC-204ENST00000504672 RTCBQ9Y3I0 505 aaKnown RBP12.72□□□□□ -0.37
PDGFC-204ENST00000504672 PARP3Q9Y6F1 533 aa12.72□□□□□ -0.37
PDGFC-204ENST00000504672 USP54Q70EL1 1684 aa12.72□□□□□ -0.37
PDGFC-204ENST00000504672 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
PDGFC-204ENST00000504672 CHRNA5P30532 468 aa12.71□□□□□ -0.37
PDGFC-204ENST00000504672 DALRD3Q5D0E6 543 aaKnown RBP12.71□□□□□ -0.37
PDGFC-204ENST00000504672 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
PDGFC-204ENST00000504672 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
PDGFC-204ENST00000504672 SPG7Q9UQ90 795 aa12.71□□□□□ -0.37
PDGFC-204ENST00000504672 TOGARAM1Q9Y4F4 1720 aa12.71□□□□□ -0.38
PDGFC-204ENST00000504672 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.38
PDGFC-204ENST00000504672 NSD3Q9BZ95 1437 aa12.71□□□□□ -0.38
PDGFC-204ENST00000504672 GYS1P13807 737 aa12.7□□□□□ -0.38
PDGFC-204ENST00000504672 RFC4P35249 363 aa12.7□□□□□ -0.38
PDGFC-204ENST00000504672 SMC1BQ8NDV3 1235 aa12.7□□□□□ -0.38
PDGFC-204ENST00000504672 PUS7Q96PZ0 661 aaKnown RBP12.7□□□□□ -0.38
PDGFC-204ENST00000504672 INSRP06213 1382 aa12.69□□□□□ -0.38
PDGFC-204ENST00000504672 ST20-MTHFSA0A0A6YYL1 179 aa12.69□□□□□ -0.38
PDGFC-204ENST00000504672 DCAF5Q96JK2 942 aa12.69□□□□□ -0.38
PDGFC-204ENST00000504672 EMILIN1Q9Y6C2 1016 aa12.69□□□□□ -0.38
PDGFC-204ENST00000504672 CICQ96RK0 1608 aaPredicted RBP12.69□□□□□ -0.38
PDGFC-204ENST00000504672 RTL1A6NKG5 1358 aa12.69□□□□□ -0.38
PDGFC-204ENST00000504672 WDR90Q96KV7 1748 aa12.68□□□□□ -0.38
PDGFC-204ENST00000504672 TESK2Q96S53 571 aa12.68□□□□□ -0.38
PDGFC-204ENST00000504672 SRP68Q9UHB9 627 aaKnown RBP12.68□□□□□ -0.38
PDGFC-204ENST00000504672 C10orf71Q711Q0 1435 aa12.68□□□□□ -0.38
PDGFC-204ENST00000504672 TAF1LQ8IZX4 1826 aa12.67□□□□□ -0.38
PDGFC-204ENST00000504672 PHKG2P15735 406 aa12.67□□□□□ -0.38
PDGFC-204ENST00000504672 FKBP8Q14318 412 aa12.67□□□□□ -0.38
PDGFC-204ENST00000504672 N4BP2Q86UW6 1770 aaPredicted RBP12.66□□□□□ -0.38
PDGFC-204ENST00000504672 UBR3Q6ZT12 1888 aa12.66□□□□□ -0.38
PDGFC-204ENST00000504672 RPS6KA4O75676 772 aa12.66□□□□□ -0.38
PDGFC-204ENST00000504672 RASSF7Q02833 373 aa12.66□□□□□ -0.38
PDGFC-204ENST00000504672 DDR1Q08345 913 aa12.66□□□□□ -0.38
PDGFC-204ENST00000504672 IFNL2Q8IZJ0 200 aa12.66□□□□□ -0.38
PDGFC-204ENST00000504672 VEGFAP15692 232 aaPredicted RBP12.65□□□□□ -0.38
PDGFC-204ENST00000504672 RC3H1Q5TC82 1133 aaKnown RBP12.65□□□□□ -0.38
PDGFC-204ENST00000504672 EYA1Q99502 592 aa12.65□□□□□ -0.38
PDGFC-204ENST00000504672 FLT4P35916 1363 aa12.65□□□□□ -0.38
PDGFC-204ENST00000504672 PLEKHG2Q9H7P9 1386 aa12.65□□□□□ -0.38
PDGFC-204ENST00000504672 PTCD1O75127 700 aaKnown RBP12.64□□□□□ -0.39
PDGFC-204ENST00000504672 MKRN1Q9UHC7 482 aaKnown RBP12.63□□□□□ -0.39
PDGFC-204ENST00000504672 KIAA1551Q9HCM1 1747 aa12.62□□□□□ -0.39
PDGFC-204ENST00000504672 GLTPD2A6NH11 291 aa12.62□□□□□ -0.39
PDGFC-204ENST00000504672 CARD14Q9BXL6 1004 aa12.62□□□□□ -0.39
PDGFC-204ENST00000504672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDGFC-204ENST00000504672 MAP2P11137 1827 aaKnown RBP12.6□□□□□ -0.39
PDGFC-204ENST00000504672 ITGB4P16144 1822 aa12.6□□□□□ -0.39
PDGFC-204ENST00000504672 POTECB2RU33 542 aa12.6□□□□□ -0.39
PDGFC-204ENST00000504672 FOXN1O15353 648 aa12.6□□□□□ -0.39
PDGFC-204ENST00000504672 LMNB1P20700 586 aa12.6□□□□□ -0.39
PDGFC-204ENST00000504672 CRKLP46109 303 aaKnown RBP12.6□□□□□ -0.39
PDGFC-204ENST00000504672 CABP4P57796 275 aa12.6□□□□□ -0.39
PDGFC-204ENST00000504672 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
PDGFC-204ENST00000504672 CNTNAP4Q9C0A0 1308 aa12.6□□□□□ -0.39
PDGFC-204ENST00000504672 KDRP35968 1356 aa12.59□□□□□ -0.39
PDGFC-204ENST00000504672 ERVV-2B6SEH9 535 aa12.59□□□□□ -0.39
PDGFC-204ENST00000504672 POLRMTO00411 1230 aaKnown RBP12.59□□□□□ -0.39
PDGFC-204ENST00000504672 TM4SF1P30408 202 aa12.59□□□□□ -0.39
PDGFC-204ENST00000504672 TNNT2P45379 298 aaPredicted RBP12.59□□□□□ -0.39
PDGFC-204ENST00000504672 WASHC2AQ641Q2 1341 aa12.59□□□□□ -0.39
PDGFC-204ENST00000504672 SLC34A2O95436 690 aa12.58□□□□□ -0.4
PDGFC-204ENST00000504672 C4AP0C0L4 1744 aa12.58□□□□□ -0.4
PDGFC-204ENST00000504672 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
PDGFC-204ENST00000504672 USP42Q9H9J4 1324 aaKnown RBP12.58□□□□□ -0.4
PDGFC-204ENST00000504672 TONSLQ96HA7 1378 aa12.57□□□□□ -0.4
PDGFC-204ENST00000504672 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
PDGFC-204ENST00000504672 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
PDGFC-204ENST00000504672 USPL1Q5W0Q7 1092 aa12.57□□□□□ -0.4
PDGFC-204ENST00000504672 INTS5Q6P9B9 1019 aaKnown RBP12.57□□□□□ -0.4
PDGFC-204ENST00000504672 NFATC2IPQ8NCF5 419 aa12.57□□□□□ -0.4
PDGFC-204ENST00000504672 KIF13BQ9NQT8 1826 aa12.57□□□□□ -0.4
PDGFC-204ENST00000504672 KIF24Q5T7B8 1368 aa12.56□□□□□ -0.4
PDGFC-204ENST00000504672 ZPR1O75312 459 aa12.56□□□□□ -0.4
PDGFC-204ENST00000504672 EIF4A2Q14240 407 aaKnown RBP12.56□□□□□ -0.4
PDGFC-204ENST00000504672 C2CD5Q86YS7 1000 aa12.56□□□□□ -0.4
PDGFC-204ENST00000504672 POLKQ9UBT6 870 aa12.56□□□□□ -0.4
PDGFC-204ENST00000504672 NFKBIEO00221 500 aa12.55□□□□□ -0.4
PDGFC-204ENST00000504672 MTHFSP49914 203 aa12.55□□□□□ -0.4
PDGFC-204ENST00000504672 NFIXQ14938 502 aa12.55□□□□□ -0.4
PDGFC-204ENST00000504672 ZNF530Q6P9A1 599 aaPredicted RBP12.55□□□□□ -0.4
PDGFC-204ENST00000504672 TTLL6Q8N841 843 aa12.55□□□□□ -0.4
PDGFC-204ENST00000504672 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
PDGFC-204ENST00000504672 PLEKHO1Q53GL0 409 aaPredicted RBP12.54□□□□□ -0.4
PDGFC-204ENST00000504672 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
PDGFC-204ENST00000504672 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
PDGFC-204ENST00000504672 CREBZFQ9NS37 354 aa12.54□□□□□ -0.4
PDGFC-204ENST00000504672 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
PDGFC-204ENST00000504672 SLC24A1O60721 1099 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms