RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 ITGA6P23229 1130 aa9.9□□□□□ -0.82
NFKB1-203ENST00000502367 GDF10P55107 478 aa9.9□□□□□ -0.82
NFKB1-203ENST00000502367 FHDC1Q9C0D6 1143 aaPredicted RBP9.9□□□□□ -0.82
NFKB1-203ENST00000502367 TFIP11Q9UBB9 837 aaKnown RBP9.9□□□□□ -0.82
NFKB1-203ENST00000502367 BAZ1BQ9UIG0 1483 aaKnown RBP9.9□□□□□ -0.83
NFKB1-203ENST00000502367 GPC1P35052 558 aa9.89□□□□□ -0.83
NFKB1-203ENST00000502367 EML3Q32P44 896 aa9.89□□□□□ -0.83
NFKB1-203ENST00000502367 NBPF10Q6P3W6 841 aaKnown RBP9.89□□□□□ -0.83
NFKB1-203ENST00000502367 NBPF15Q8N660 670 aa9.89□□□□□ -0.83
NFKB1-203ENST00000502367 TRIM52Q96A61 297 aa9.89□□□□□ -0.83
NFKB1-203ENST00000502367 GAS2L1Q99501 681 aaPredicted RBP9.89□□□□□ -0.83
NFKB1-203ENST00000502367 GTF3C3Q9Y5Q9 886 aa9.89□□□□□ -0.83
NFKB1-203ENST00000502367 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
NFKB1-203ENST00000502367 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.88□□□□□ -0.83
NFKB1-203ENST00000502367 CALR3Q96L12 384 aaKnown RBP9.88□□□□□ -0.83
NFKB1-203ENST00000502367 ZSCAN10Q96SZ4 725 aaPredicted RBP9.88□□□□□ -0.83
NFKB1-203ENST00000502367 KIAA1024Q9UPX6 916 aa9.88□□□□□ -0.83
NFKB1-203ENST00000502367 USP3Q9Y6I4 520 aa9.88□□□□□ -0.83
NFKB1-203ENST00000502367 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
NFKB1-203ENST00000502367 USP17L3A6NCW0 530 aa9.87□□□□□ -0.83
NFKB1-203ENST00000502367 USP17L4A6NCW7 530 aa9.87□□□□□ -0.83
NFKB1-203ENST00000502367 WIPF1O43516 503 aa9.87□□□□□ -0.83
NFKB1-203ENST00000502367 INHAP05111 366 aa9.87□□□□□ -0.83
NFKB1-203ENST00000502367 GTF2IP78347 998 aa9.87□□□□□ -0.83
NFKB1-203ENST00000502367 KRT76Q01546 638 aa9.87□□□□□ -0.83
NFKB1-203ENST00000502367 USP17L2Q6R6M4 530 aa9.87□□□□□ -0.83
NFKB1-203ENST00000502367 RIPOR1Q6ZS17 1223 aa9.87□□□□□ -0.83
NFKB1-203ENST00000502367 USP17L1Q7RTZ2 530 aa9.87□□□□□ -0.83
NFKB1-203ENST00000502367 SIRT1Q96EB6 747 aa9.87□□□□□ -0.83
NFKB1-203ENST00000502367 NOD1Q9Y239 953 aa9.87□□□□□ -0.83
NFKB1-203ENST00000502367 ZBTB7BO15156 539 aaPredicted RBP9.86□□□□□ -0.83
NFKB1-203ENST00000502367 TLR1Q15399 786 aa9.86□□□□□ -0.83
NFKB1-203ENST00000502367 DBN1Q16643 649 aa9.86□□□□□ -0.83
NFKB1-203ENST00000502367 C4orf17Q53FE4 359 aa9.86□□□□□ -0.83
NFKB1-203ENST00000502367 WASLO00401 505 aaPredicted RBP9.85□□□□□ -0.83
NFKB1-203ENST00000502367 ATP9BO43861 1147 aa9.85□□□□□ -0.83
NFKB1-203ENST00000502367 VSIG8P0DPA2 414 aa9.85□□□□□ -0.83
NFKB1-203ENST00000502367 LORP23490 312 aaPredicted RBP9.85□□□□□ -0.83
NFKB1-203ENST00000502367 CLDN10P78369 228 aa9.85□□□□□ -0.83
NFKB1-203ENST00000502367 PSME1Q06323 249 aa9.85□□□□□ -0.83
NFKB1-203ENST00000502367 ESCO1Q5FWF5 840 aa9.85□□□□□ -0.83
NFKB1-203ENST00000502367 RNFT1Q5M7Z0 435 aa9.85□□□□□ -0.83
NFKB1-203ENST00000502367 TMEM214Q6NUQ4 689 aaKnown RBP9.85□□□□□ -0.83
NFKB1-203ENST00000502367 NFATC2IPQ8NCF5 419 aa9.85□□□□□ -0.83
NFKB1-203ENST00000502367 PALM3A6NDB9 673 aaPredicted RBP9.84□□□□□ -0.83
NFKB1-203ENST00000502367 SPATA31C2B4DYI2 1134 aa9.84□□□□□ -0.83
NFKB1-203ENST00000502367 GPR25O00155 361 aa9.84□□□□□ -0.83
NFKB1-203ENST00000502367 TAS1R3Q7RTX0 852 aa9.84□□□□□ -0.83
NFKB1-203ENST00000502367 GPAMQ9HCL2 828 aa9.84□□□□□ -0.83
NFKB1-203ENST00000502367 TIMMDC1Q9NPL8 285 aa9.84□□□□□ -0.83
NFKB1-203ENST00000502367 MKRN1Q9UHC7 482 aaKnown RBP9.84□□□□□ -0.83
NFKB1-203ENST00000502367 TBCELQ5QJ74 424 aa9.83□□□□□ -0.84
NFKB1-203ENST00000502367 CNTNAP3BQ96NU0 1288 aa9.83□□□□□ -0.84
NFKB1-203ENST00000502367 COL25A1Q9BXS0 654 aaPredicted RBP9.83□□□□□ -0.84
NFKB1-203ENST00000502367 CNTNAP3Q9BZ76 1288 aa9.83□□□□□ -0.84
NFKB1-203ENST00000502367 THBS1P07996 1170 aa9.82□□□□□ -0.84
NFKB1-203ENST00000502367 SMTNP53814 917 aa9.82□□□□□ -0.84
NFKB1-203ENST00000502367 NANOS1Q8WY41 292 aaKnown RBP9.82□□□□□ -0.84
NFKB1-203ENST00000502367 PPP1R12CQ9BZL4 782 aa9.82□□□□□ -0.84
NFKB1-203ENST00000502367 ZNF358Q9NW07 568 aa9.82□□□□□ -0.84
NFKB1-203ENST00000502367 PARP3Q9Y6F1 533 aa9.82□□□□□ -0.84
NFKB1-203ENST00000502367 LGR5O75473 907 aa9.81□□□□□ -0.84
NFKB1-203ENST00000502367 CDCA8Q53HL2 280 aa9.81□□□□□ -0.84
NFKB1-203ENST00000502367 SV2AQ7L0J3 742 aa9.81□□□□□ -0.84
NFKB1-203ENST00000502367 PPARGC1BQ86YN6 1023 aaKnown RBP9.81□□□□□ -0.84
NFKB1-203ENST00000502367 TNS4Q8IZW8 715 aa9.81□□□□□ -0.84
NFKB1-203ENST00000502367 TPCN2Q8NHX9 752 aa9.81□□□□□ -0.84
NFKB1-203ENST00000502367 ZNF594Q96JF6 807 aaPredicted RBP9.81□□□□□ -0.84
NFKB1-203ENST00000502367 DYRK1BQ9Y463 629 aa9.81□□□□□ -0.84
NFKB1-203ENST00000502367 MAFBQ9Y5Q3 323 aaPredicted RBP9.81□□□□□ -0.84
NFKB1-203ENST00000502367 PLEKHM2Q8IWE5 1019 aa9.8□□□□□ -0.84
NFKB1-203ENST00000502367 OGFOD1Q8N543 542 aa9.8□□□□□ -0.84
NFKB1-203ENST00000502367 ZNF837Q96EG3 531 aaPredicted RBP9.8□□□□□ -0.84
NFKB1-203ENST00000502367 ZMYND15Q9H091 742 aa9.8□□□□□ -0.84
NFKB1-203ENST00000502367 LOC105371045A0A1W2PR82 267 aa9.79□□□□□ -0.84
NFKB1-203ENST00000502367 A6NJY4 79 aa9.79□□□□□ -0.84
NFKB1-203ENST00000502367 SFI1A8K8P3 1242 aa9.79□□□□□ -0.84
NFKB1-203ENST00000502367 LMOD1P29536 600 aaPredicted RBP9.79□□□□□ -0.84
NFKB1-203ENST00000502367 PLA2G4AP47712 749 aa9.79□□□□□ -0.84
NFKB1-203ENST00000502367 GAS2L2Q8NHY3 880 aa9.79□□□□□ -0.84
NFKB1-203ENST00000502367 GTPBP3Q969Y2 492 aaKnown RBP9.79□□□□□ -0.84
NFKB1-203ENST00000502367 RUBCNLQ9H714 662 aa9.79□□□□□ -0.84
NFKB1-203ENST00000502367 SYNJ1O43426 1573 aa9.79□□□□□ -0.84
NFKB1-203ENST00000502367 LZTS3O60299 673 aaPredicted RBP9.78□□□□□ -0.84
NFKB1-203ENST00000502367 RFX1P22670 979 aa9.78□□□□□ -0.84
NFKB1-203ENST00000502367 GNASQ5JWF2 1037 aa9.78□□□□□ -0.84
NFKB1-203ENST00000502367 CCDC102BQ68D86 513 aa9.78□□□□□ -0.84
NFKB1-203ENST00000502367 RHBDD1Q8TEB9 315 aa9.78□□□□□ -0.84
NFKB1-203ENST00000502367 AIDAQ96BJ3 306 aa9.78□□□□□ -0.84
NFKB1-203ENST00000502367 SLC4A9Q96Q91 983 aa9.78□□□□□ -0.84
NFKB1-203ENST00000502367 DNAAF2Q9NVR5 837 aaKnown RBP9.78□□□□□ -0.84
NFKB1-203ENST00000502367 IQSEC3Q9UPP2 1182 aaPredicted RBP9.78□□□□□ -0.84
NFKB1-203ENST00000502367 CC2D2AQ9P2K1 1620 aa9.78□□□□□ -0.84
NFKB1-203ENST00000502367 PRDM2Q13029 1718 aa9.77□□□□□ -0.85
NFKB1-203ENST00000502367 ARID3CA6NKF2 412 aa9.77□□□□□ -0.85
NFKB1-203ENST00000502367 MSX1P28360 303 aa9.77□□□□□ -0.85
NFKB1-203ENST00000502367 GAS6Q14393 721 aa9.77□□□□□ -0.85
NFKB1-203ENST00000502367 ZNF295-AS1Q8N0V1 137 aa9.77□□□□□ -0.85
NFKB1-203ENST00000502367 DKK1O94907 266 aa9.76□□□□□ -0.85
NFKB1-203ENST00000502367 F11P03951 625 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms