RNA–Protein interactions for RNA: ENST00000498819.1

SECISBP2-208, Transcript of SECIS binding protein 2, human

TSL 5

Gene SECISBP2, Length 854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SECISBP2-208	ENST00000498819	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.81	□□□□□ -0.2
SECISBP2-208	ENST00000498819	KCNA3	P22001	575 aa		13.8	□□□□□ -0.2
SECISBP2-208	ENST00000498819	TMF1	P82094	1093 aa		13.8	□□□□□ -0.2
SECISBP2-208	ENST00000498819	RNF181	Q9P0P0	153 aa		13.8	□□□□□ -0.2
SECISBP2-208	ENST00000498819	SMG6	Q86US8	1419 aa	Known RBP	13.8	□□□□□ -0.2
SECISBP2-208	ENST00000498819	ITPK1	Q13572	414 aa		13.79	□□□□□ -0.2
SECISBP2-208	ENST00000498819	DCAF5	Q96JK2	942 aa		13.79	□□□□□ -0.2
SECISBP2-208	ENST00000498819	PUS7	Q96PZ0	661 aa	Known RBP	13.79	□□□□□ -0.2
SECISBP2-208	ENST00000498819	PIM2	Q9P1W9	311 aa		13.79	□□□□□ -0.2
SECISBP2-208	ENST00000498819	ATP6V1A	P38606	617 aa		13.78	□□□□□ -0.2
SECISBP2-208	ENST00000498819	NKX1-1	Q15270	411 aa	Predicted RBP	13.78	□□□□□ -0.2
SECISBP2-208	ENST00000498819	TRAPPC3L	Q5T215	181 aa		13.78	□□□□□ -0.2
SECISBP2-208	ENST00000498819	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.78	□□□□□ -0.2
SECISBP2-208	ENST00000498819	MAP2	P11137	1827 aa	Known RBP	13.77	□□□□□ -0.21
SECISBP2-208	ENST00000498819	DALRD3	Q5D0E6	543 aa	Known RBP	13.77	□□□□□ -0.21
SECISBP2-208	ENST00000498819	RTCB	Q9Y3I0	505 aa	Known RBP	13.77	□□□□□ -0.21
SECISBP2-208	ENST00000498819	PARP3	Q9Y6F1	533 aa		13.77	□□□□□ -0.21
SECISBP2-208	ENST00000498819	PKD1L3	Q7Z443	1732 aa		13.76	□□□□□ -0.21
SECISBP2-208	ENST00000498819	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.76	□□□□□ -0.21
SECISBP2-208	ENST00000498819	RRS1	Q15050	365 aa	Known RBP	13.76	□□□□□ -0.21
SECISBP2-208	ENST00000498819	PCDH10	Q9P2E7	1040 aa		13.76	□□□□□ -0.21
SECISBP2-208	ENST00000498819	VEGFA	P15692	232 aa	Predicted RBP	13.75	□□□□□ -0.21
SECISBP2-208	ENST00000498819	ADRA2B	P18089	450 aa		13.75	□□□□□ -0.21
SECISBP2-208	ENST00000498819	TMOD3	Q9NYL9	352 aa		13.75	□□□□□ -0.21
SECISBP2-208	ENST00000498819	ASAP1	Q9ULH1	1129 aa		13.75	□□□□□ -0.21
SECISBP2-208	ENST00000498819	BRCA1	P38398	1863 aa	Known RBP	13.75	□□□□□ -0.21
SECISBP2-208	ENST00000498819	ITGB4	P16144	1822 aa		13.75	□□□□□ -0.21
SECISBP2-208	ENST00000498819	INSR	P06213	1382 aa		13.74	□□□□□ -0.21
SECISBP2-208	ENST00000498819	ARFGEF1	Q9Y6D6	1849 aa		13.74	□□□□□ -0.21
SECISBP2-208	ENST00000498819	C4A	P0C0L4	1744 aa		13.74	□□□□□ -0.21
SECISBP2-208	ENST00000498819	GYS1	P13807	737 aa		13.74	□□□□□ -0.21
SECISBP2-208	ENST00000498819	ARHGEF1	Q92888	912 aa	Known RBP	13.74	□□□□□ -0.21
SECISBP2-208	ENST00000498819	HSP90AB2P	Q58FF8	381 aa		13.73	□□□□□ -0.21
SECISBP2-208	ENST00000498819	GLTPD2	A6NH11	291 aa		13.72	□□□□□ -0.21
SECISBP2-208	ENST00000498819	RFC4	P35249	363 aa		13.72	□□□□□ -0.21
SECISBP2-208	ENST00000498819	RC3H1	Q5TC82	1133 aa	Known RBP	13.72	□□□□□ -0.21
SECISBP2-208	ENST00000498819	PRDM10	Q9NQV6	1147 aa		13.72	□□□□□ -0.21
SECISBP2-208	ENST00000498819	SPG7	Q9UQ90	795 aa		13.72	□□□□□ -0.21
SECISBP2-208	ENST00000498819	KIF24	Q5T7B8	1368 aa		13.71	□□□□□ -0.21
SECISBP2-208	ENST00000498819	ATG3	Q9NT62	314 aa		13.71	□□□□□ -0.21
SECISBP2-208	ENST00000498819	FLT4	P35916	1363 aa		13.71	□□□□□ -0.22
SECISBP2-208	ENST00000498819	RPS6KA4	O75676	772 aa		13.7	□□□□□ -0.22
SECISBP2-208	ENST00000498819	CARD11	Q9BXL7	1154 aa		13.7	□□□□□ -0.22
SECISBP2-208	ENST00000498819	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.7	□□□□□ -0.22	2e-7	■■■■□ 26
SECISBP2-208	ENST00000498819	KDM6A	O15550	1401 aa	Predicted RBP	13.7	□□□□□ -0.22
SECISBP2-208	ENST00000498819	KDR	P35968	1356 aa		13.7	□□□□□ -0.22
SECISBP2-208	ENST00000498819	CNTNAP4	Q9C0A0	1308 aa		13.69	□□□□□ -0.22
SECISBP2-208	ENST00000498819	FYB1	O15117	783 aa		13.69	□□□□□ -0.22
SECISBP2-208	ENST00000498819	LMNB1	P20700	586 aa		13.69	□□□□□ -0.22
SECISBP2-208	ENST00000498819	CREBZF	Q9NS37	354 aa		13.69	□□□□□ -0.22
SECISBP2-208	ENST00000498819	FOXN1	O15353	648 aa		13.68	□□□□□ -0.22
SECISBP2-208	ENST00000498819	CHRNA5	P30532	468 aa		13.68	□□□□□ -0.22
SECISBP2-208	ENST00000498819	SLC4A9	Q96Q91	983 aa		13.68	□□□□□ -0.22
SECISBP2-208	ENST00000498819	GGNBP2	Q9H3C7	697 aa		13.68	□□□□□ -0.22
SECISBP2-208	ENST00000498819	NCAPD2	Q15021	1401 aa		13.67	□□□□□ -0.22
SECISBP2-208	ENST00000498819	IFNL2	Q8IZJ0	200 aa		13.67	□□□□□ -0.22
SECISBP2-208	ENST00000498819	SIN3A	Q96ST3	1273 aa		13.67	□□□□□ -0.22
SECISBP2-208	ENST00000498819	SBF1	O95248	1867 aa		13.66	□□□□□ -0.22
SECISBP2-208	ENST00000498819	PHKG2	P15735	406 aa		13.66	□□□□□ -0.22
SECISBP2-208	ENST00000498819	RASSF7	Q02833	373 aa		13.66	□□□□□ -0.22
SECISBP2-208	ENST00000498819	MKRN1	Q9UHC7	482 aa	Known RBP	13.66	□□□□□ -0.22
SECISBP2-208	ENST00000498819	TONSL	Q96HA7	1378 aa		13.66	□□□□□ -0.22
SECISBP2-208	ENST00000498819	ZNF831	Q5JPB2	1677 aa		13.66	□□□□□ -0.22
SECISBP2-208	ENST00000498819	POTEC	B2RU33	542 aa		13.65	□□□□□ -0.22
SECISBP2-208	ENST00000498819	CTCF	P49711	727 aa	Predicted RBP	13.65	□□□□□ -0.22
SECISBP2-208	ENST00000498819	DDR1	Q08345	913 aa		13.65	□□□□□ -0.22
SECISBP2-208	ENST00000498819	FAM161A	Q3B820	660 aa		13.65	□□□□□ -0.22
SECISBP2-208	ENST00000498819	RBM42	Q9BTD8	480 aa	Known RBP	13.65	□□□□□ -0.22
SECISBP2-208	ENST00000498819	SLC24A1	O60721	1099 aa		13.64	□□□□□ -0.23
SECISBP2-208	ENST00000498819	FKBP8	Q14318	412 aa		13.64	□□□□□ -0.23
SECISBP2-208	ENST00000498819	DPY19L2	Q6NUT2	758 aa		13.64	□□□□□ -0.23
SECISBP2-208	ENST00000498819	AIDA	Q96BJ3	306 aa		13.64	□□□□□ -0.23
SECISBP2-208	ENST00000498819	CNTNAP1	P78357	1384 aa		13.63	□□□□□ -0.23
SECISBP2-208	ENST00000498819	ERVV-2	B6SEH9	535 aa		13.63	□□□□□ -0.23
SECISBP2-208	ENST00000498819	NEUROD1	Q13562	356 aa		13.63	□□□□□ -0.23
SECISBP2-208	ENST00000498819	USP42	Q9H9J4	1324 aa	Known RBP	13.63	□□□□□ -0.23
SECISBP2-208	ENST00000498819	POLRMT	O00411	1230 aa	Known RBP	13.62	□□□□□ -0.23
SECISBP2-208	ENST00000498819	TM4SF1	P30408	202 aa		13.62	□□□□□ -0.23
SECISBP2-208	ENST00000498819	CHADL	Q6NUI6	762 aa		13.62	□□□□□ -0.23
SECISBP2-208	ENST00000498819	TESK2	Q96S53	571 aa		13.62	□□□□□ -0.23
SECISBP2-208	ENST00000498819	SRP68	Q9UHB9	627 aa	Known RBP	13.62	□□□□□ -0.23
SECISBP2-208	ENST00000498819	COL5A3	P25940	1745 aa	Predicted RBP	13.61	□□□□□ -0.23
SECISBP2-208	ENST00000498819	ABHD8	Q96I13	439 aa		13.61	□□□□□ -0.23
SECISBP2-208	ENST00000498819	EMILIN1	Q9Y6C2	1016 aa		13.61	□□□□□ -0.23
SECISBP2-208	ENST00000498819	CRKL	P46109	303 aa	Known RBP	13.6	□□□□□ -0.23
SECISBP2-208	ENST00000498819	TTLL6	Q8N841	843 aa		13.6	□□□□□ -0.23
SECISBP2-208	ENST00000498819	EYA1	Q99502	592 aa		13.6	□□□□□ -0.23
SECISBP2-208	ENST00000498819	LBX1	P52954	281 aa		13.59	□□□□□ -0.23
SECISBP2-208	ENST00000498819	MLLT1	Q03111	559 aa	Predicted RBP	13.59	□□□□□ -0.23
SECISBP2-208	ENST00000498819	WBP1L	Q9NX94	342 aa		13.59	□□□□□ -0.23
SECISBP2-208	ENST00000498819	WASHC2A	Q641Q2	1341 aa		13.59	□□□□□ -0.23
SECISBP2-208	ENST00000498819	NFKBIE	O00221	500 aa		13.58	□□□□□ -0.24
SECISBP2-208	ENST00000498819	HSP90AB1	P08238	724 aa	Known RBP	13.58	□□□□□ -0.24
SECISBP2-208	ENST00000498819	TIAM2	Q8IVF5	1701 aa		13.57	□□□□□ -0.24
SECISBP2-208	ENST00000498819	ST20-MTHFS	A0A0A6YYL1	179 aa		13.57	□□□□□ -0.24
SECISBP2-208	ENST00000498819	PPM1G	O15355	546 aa	Predicted RBP	13.57	□□□□□ -0.24
SECISBP2-208	ENST00000498819	VEGFB	P49765	207 aa		13.57	□□□□□ -0.24
SECISBP2-208	ENST00000498819	RGS19	P49795	217 aa		13.57	□□□□□ -0.24
SECISBP2-208	ENST00000498819	CABP4	P57796	275 aa		13.57	□□□□□ -0.24
SECISBP2-208	ENST00000498819	PASK	Q96RG2	1323 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms