RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 ZNF395Q9H8N7 513 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-208ENST00000498325 ENAMQ9NRM1 1142 aa8.35□□□□□ -1.07
HMGXB4-208ENST00000498325 CFAP43Q8NDM7 1665 aa8.34□□□□□ -1.07
HMGXB4-208ENST00000498325 MSTNO14793 375 aa8.34□□□□□ -1.07
HMGXB4-208ENST00000498325 CELA2BP08218 269 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-208ENST00000498325 RTL5Q5HYW3 569 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-208ENST00000498325 PDXDC2PQ6P474 469 aa8.34□□□□□ -1.07
HMGXB4-208ENST00000498325 DISP1Q96F81 1524 aa8.34□□□□□ -1.08
HMGXB4-208ENST00000498325 IQSEC2Q5JU85 1478 aa8.33□□□□□ -1.08
HMGXB4-208ENST00000498325 UBAP1LF5GYI3 381 aa8.33□□□□□ -1.08
HMGXB4-208ENST00000498325 SLC24A1O60721 1099 aa8.33□□□□□ -1.08
HMGXB4-208ENST00000498325 ZBTB33Q86T24 672 aa8.33□□□□□ -1.08
HMGXB4-208ENST00000498325 HSPA1LP34931 641 aa8.32□□□□□ -1.08
HMGXB4-208ENST00000498325 PLA2G4EQ3MJ16 856 aa8.32□□□□□ -1.08
HMGXB4-208ENST00000498325 INTS6LQ5JSJ4 861 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-208ENST00000498325 IGF1RP08069 1367 aa8.32□□□□□ -1.08
HMGXB4-208ENST00000498325 FRMPD1Q5SYB0 1578 aa8.31□□□□□ -1.08
HMGXB4-208ENST00000498325 PTPRTO14522 1441 aa8.31□□□□□ -1.08
HMGXB4-208ENST00000498325 PHF20L1A8MW92 1017 aa8.31□□□□□ -1.08
HMGXB4-208ENST00000498325 ADAM23O75077 832 aa8.31□□□□□ -1.08
HMGXB4-208ENST00000498325 CEBPAP49715 358 aaPredicted RBP8.31□□□□□ -1.08
HMGXB4-208ENST00000498325 GAS6Q14393 721 aa8.31□□□□□ -1.08
HMGXB4-208ENST00000498325 DCAF5Q96JK2 942 aa8.3□□□□□ -1.08
HMGXB4-208ENST00000498325 SPOCK3Q9BQ16 436 aa8.3□□□□□ -1.08
HMGXB4-208ENST00000498325 CUEDC1Q9NWM3 386 aaPredicted RBP8.3□□□□□ -1.08
HMGXB4-208ENST00000498325 FKBPLQ9UIM3 349 aa8.3□□□□□ -1.08
HMGXB4-208ENST00000498325 PRXQ9BXM0 1461 aa8.3□□□□□ -1.08
HMGXB4-208ENST00000498325 MLECQ14165 292 aa8.29□□□□□ -1.08
HMGXB4-208ENST00000498325 FOXD4L5Q5VV16 416 aaPredicted RBP8.29□□□□□ -1.08
HMGXB4-208ENST00000498325 AK7Q96M32 723 aa8.29□□□□□ -1.08
HMGXB4-208ENST00000498325 SIGLEC1Q9BZZ2 1709 aa8.29□□□□□ -1.08
HMGXB4-208ENST00000498325 CNTNAP5Q8WYK1 1306 aa8.29□□□□□ -1.08
HMGXB4-208ENST00000498325 ADH1AP07327 375 aa8.28□□□□□ -1.08
HMGXB4-208ENST00000498325 CLK2P49760 499 aaKnown RBP8.28□□□□□ -1.08
HMGXB4-208ENST00000498325 CTDSPL2Q05D32 466 aa8.28□□□□□ -1.08
HMGXB4-208ENST00000498325 LYSMD3Q7Z3D4 306 aa8.28□□□□□ -1.08
HMGXB4-208ENST00000498325 PODNQ7Z5L7 613 aa8.28□□□□□ -1.08
HMGXB4-208ENST00000498325 BEND7Q8N7W2 519 aaPredicted RBP8.28□□□□□ -1.08
HMGXB4-208ENST00000498325 TMPRSS4Q9NRS4 437 aa8.28□□□□□ -1.08
HMGXB4-208ENST00000498325 RAPGEF2Q9Y4G8 1499 aa8.27□□□□□ -1.09
HMGXB4-208ENST00000498325 CARMIL1Q5VZK9 1371 aa8.27□□□□□ -1.09
HMGXB4-208ENST00000498325 ZNF784Q8NCA9 323 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-208ENST00000498325 NEDD1Q8NHV4 660 aa8.27□□□□□ -1.09
HMGXB4-208ENST00000498325 MBIPQ9NS73 344 aa8.27□□□□□ -1.09
HMGXB4-208ENST00000498325 PREX1Q8TCU6 1659 aa8.27□□□□□ -1.09
HMGXB4-208ENST00000498325 ZC3H4Q9UPT8 1303 aaKnown RBP8.27□□□□□ -1.09
HMGXB4-208ENST00000498325 TTC37Q6PGP7 1564 aa8.27□□□□□ -1.09
HMGXB4-208ENST00000498325 PHLDB1Q86UU1 1377 aa8.26□□□□□ -1.09
HMGXB4-208ENST00000498325 ARHGEF40Q8TER5 1519 aa8.26□□□□□ -1.09
HMGXB4-208ENST00000498325 PTGIRP43119 386 aa8.26□□□□□ -1.09
HMGXB4-208ENST00000498325 RAB15P59190 212 aa8.26□□□□□ -1.09
HMGXB4-208ENST00000498325 PTK2Q05397 1052 aa8.26□□□□□ -1.09
HMGXB4-208ENST00000498325 NBPF20Q3BBV1 942 aa8.26□□□□□ -1.09
HMGXB4-208ENST00000498325 FOXR1Q6PIV2 292 aa8.26□□□□□ -1.09
HMGXB4-208ENST00000498325 GALNT6Q8NCL4 622 aa8.26□□□□□ -1.09
HMGXB4-208ENST00000498325 CEP162Q5TB80 1403 aa8.26□□□□□ -1.09
HMGXB4-208ENST00000498325 ZNF335Q9H4Z2 1342 aaPredicted RBP8.26□□□□□ -1.09
HMGXB4-208ENST00000498325 ITGB2P05107 769 aa8.25□□□□□ -1.09
HMGXB4-208ENST00000498325 ADAM32Q8TC27 787 aa8.25□□□□□ -1.09
HMGXB4-208ENST00000498325 LRRN4Q8WUT4 740 aa8.25□□□□□ -1.09
HMGXB4-208ENST00000498325 RGS17Q9UGC6 210 aaPredicted RBP8.25□□□□□ -1.09
HMGXB4-208ENST00000498325 IQGAP2Q13576 1575 aa8.25□□□□□ -1.09
HMGXB4-208ENST00000498325 POGZQ7Z3K3 1410 aa8.24□□□□□ -1.09
HMGXB4-208ENST00000498325 BCRP11274 1271 aa8.24□□□□□ -1.09
HMGXB4-208ENST00000498325 PRICKLE2Q7Z3G6 844 aa8.24□□□□□ -1.09
HMGXB4-208ENST00000498325 ZNF837Q96EG3 531 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-208ENST00000498325 GMCL1Q96IK5 515 aa8.24□□□□□ -1.09
HMGXB4-208ENST00000498325 OCSTAMPQ9BR26 566 aa8.24□□□□□ -1.09
HMGXB4-208ENST00000498325 POLR3EQ9NVU0 708 aa8.24□□□□□ -1.09
HMGXB4-208ENST00000498325 GPSM3Q9Y4H4 160 aa8.24□□□□□ -1.09
HMGXB4-208ENST00000498325 UHRF1BP1Q6BDS2 1440 aa8.23□□□□□ -1.09
HMGXB4-208ENST00000498325 GPR25O00155 361 aa8.23□□□□□ -1.09
HMGXB4-208ENST00000498325 LILRA1O75019 489 aa8.23□□□□□ -1.09
HMGXB4-208ENST00000498325 PROCP04070 461 aa8.23□□□□□ -1.09
HMGXB4-208ENST00000498325 RHOQP17081 205 aa8.23□□□□□ -1.09
HMGXB4-208ENST00000498325 ADD1P35611 737 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-208ENST00000498325 PIP4K2BP78356 416 aa8.23□□□□□ -1.09
HMGXB4-208ENST00000498325 NR6A1Q15406 480 aa8.23□□□□□ -1.09
HMGXB4-208ENST00000498325 TRIM22Q8IYM9 498 aa8.23□□□□□ -1.09
HMGXB4-208ENST00000498325 KDF1Q8NAX2 398 aaPredicted RBP8.23□□□□□ -1.09
HMGXB4-208ENST00000498325 FANCAO15360 1455 aa8.23□□□□□ -1.09
HMGXB4-208ENST00000498325 NEO1Q92859 1461 aa8.23□□□□□ -1.09
HMGXB4-208ENST00000498325 ARID3CA6NKF2 412 aa8.22□□□□□ -1.09
HMGXB4-208ENST00000498325 PDE4DQ08499 809 aa8.22□□□□□ -1.09
HMGXB4-208ENST00000498325 RSPH6AQ9H0K4 717 aa8.22□□□□□ -1.09
HMGXB4-208ENST00000498325 CLIP1P30622 1438 aa8.21□□□□□ -1.09
HMGXB4-208ENST00000498325 ERVH48-1M5A8F1 160 aa8.21□□□□□ -1.1
HMGXB4-208ENST00000498325 RIPOR1Q6ZS17 1223 aa8.21□□□□□ -1.1
HMGXB4-208ENST00000498325 KIAA0556O60303 1618 aa8.21□□□□□ -1.1
HMGXB4-208ENST00000498325 AKNAQ7Z591 1439 aa8.2□□□□□ -1.1
HMGXB4-208ENST00000498325 FER1L4A9Z1Z3 1794 aa8.2□□□□□ -1.1
HMGXB4-208ENST00000498325 UGGT2Q9NYU1 1516 aa8.2□□□□□ -1.1
HMGXB4-208ENST00000498325 ARHGEF12Q9NZN5 1544 aa8.2□□□□□ -1.1
HMGXB4-208ENST00000498325 K7ELQ4 463 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-208ENST00000498325 RNF144AP50876 292 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-208ENST00000498325 ACDQ96AP0 544 aa8.2□□□□□ -1.1
HMGXB4-208ENST00000498325 NCOA1Q15788 1441 aa8.2□□□□□ -1.1
HMGXB4-208ENST00000498325 ABCA8O94911 1581 aa8.19□□□□□ -1.1
HMGXB4-208ENST00000498325 ABCA9Q8IUA7 1624 aa8.19□□□□□ -1.1
HMGXB4-208ENST00000498325 DBN1Q16643 649 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms