RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 JMYQ8N9B5 988 aa17.73■□□□□ 0.43
TRIM27-207ENST00000498117 ITGB4P16144 1822 aa17.72■□□□□ 0.43
TRIM27-207ENST00000498117 FSTL1Q12841 308 aa17.72■□□□□ 0.43
TRIM27-207ENST00000498117 CCDC87Q9NVE4 849 aa17.72■□□□□ 0.43
TRIM27-207ENST00000498117 ASAP1Q9ULH1 1129 aa17.72■□□□□ 0.43
TRIM27-207ENST00000498117 RTCBQ9Y3I0 505 aaKnown RBP17.72■□□□□ 0.43
TRIM27-207ENST00000498117 DPEP1P16444 411 aa17.71■□□□□ 0.43
TRIM27-207ENST00000498117 C9orf131Q5VYM1 1079 aa17.7■□□□□ 0.42
TRIM27-207ENST00000498117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.7■□□□□ 0.429e-8■□□□□ 9
TRIM27-207ENST00000498117 MAP2P11137 1827 aaKnown RBP17.7■□□□□ 0.42
TRIM27-207ENST00000498117 HTRA3P83110 453 aa17.69■□□□□ 0.42
TRIM27-207ENST00000498117 KDM2BQ8NHM5 1336 aa17.69■□□□□ 0.42
TRIM27-207ENST00000498117 PLEKHG2Q9H7P9 1386 aa17.68■□□□□ 0.42
TRIM27-207ENST00000498117 CAPN15O75808 1086 aa17.68■□□□□ 0.42
TRIM27-207ENST00000498117 ADRA2BP18089 450 aa17.68■□□□□ 0.42
TRIM27-207ENST00000498117 C10orf71Q711Q0 1435 aa17.68■□□□□ 0.42
TRIM27-207ENST00000498117 IFNL2Q8IZJ0 200 aa17.68■□□□□ 0.42
TRIM27-207ENST00000498117 TNS4Q8IZW8 715 aa17.68■□□□□ 0.42
TRIM27-207ENST00000498117 ATG3Q9NT62 314 aa17.68■□□□□ 0.42
TRIM27-207ENST00000498117 PARP3Q9Y6F1 533 aa17.68■□□□□ 0.42
TRIM27-207ENST00000498117 KIF13BQ9NQT8 1826 aa17.68■□□□□ 0.42
TRIM27-207ENST00000498117 WDR90Q96KV7 1748 aa17.67■□□□□ 0.42
TRIM27-207ENST00000498117 ARHGEF1Q92888 912 aaKnown RBP17.67■□□□□ 0.42
TRIM27-207ENST00000498117 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
TRIM27-207ENST00000498117 N4BP2Q86UW6 1770 aaPredicted RBP17.66■□□□□ 0.42
TRIM27-207ENST00000498117 RFC4P35249 363 aa17.66■□□□□ 0.42
TRIM27-207ENST00000498117 PRELPP51888 382 aa17.66■□□□□ 0.42
TRIM27-207ENST00000498117 RC3H1Q5TC82 1133 aaKnown RBP17.66■□□□□ 0.42
TRIM27-207ENST00000498117 PIM2Q9P1W9 311 aa17.66■□□□□ 0.42
TRIM27-207ENST00000498117 EMILIN1Q9Y6C2 1016 aa17.66■□□□□ 0.42
TRIM27-207ENST00000498117 PKD1L3Q7Z443 1732 aa17.66■□□□□ 0.42
TRIM27-207ENST00000498117 PPM1GO15355 546 aaPredicted RBP17.65■□□□□ 0.42
TRIM27-207ENST00000498117 GYS1P13807 737 aa17.65■□□□□ 0.42
TRIM27-207ENST00000498117 PHKG2P15735 406 aa17.65■□□□□ 0.42
TRIM27-207ENST00000498117 KCNA3P22001 575 aa17.65■□□□□ 0.42
TRIM27-207ENST00000498117 RRAGCQ9HB90 399 aa17.65■□□□□ 0.42
TRIM27-207ENST00000498117 NCAPD2Q15021 1401 aa17.64■□□□□ 0.42
TRIM27-207ENST00000498117 KIAA1551Q9HCM1 1747 aa17.64■□□□□ 0.41
TRIM27-207ENST00000498117 RPS6KA4O75676 772 aa17.64■□□□□ 0.41
TRIM27-207ENST00000498117 EYA1Q99502 592 aa17.64■□□□□ 0.41
TRIM27-207ENST00000498117 DALRD3Q5D0E6 543 aaKnown RBP17.63■□□□□ 0.41
TRIM27-207ENST00000498117 DCAF5Q96JK2 942 aa17.63■□□□□ 0.41
TRIM27-207ENST00000498117 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
TRIM27-207ENST00000498117 RNF181Q9P0P0 153 aa17.63■□□□□ 0.41
TRIM27-207ENST00000498117 SMC1BQ8NDV3 1235 aa17.62■□□□□ 0.41
TRIM27-207ENST00000498117 WASHC2AQ641Q2 1341 aa17.62■□□□□ 0.41
TRIM27-207ENST00000498117 CNTNAP4Q9C0A0 1308 aa17.62■□□□□ 0.41
TRIM27-207ENST00000498117 CDCA8Q53HL2 280 aa17.61■□□□□ 0.41
TRIM27-207ENST00000498117 SLC4A9Q96Q91 983 aa17.61■□□□□ 0.41
TRIM27-207ENST00000498117 KDRP35968 1356 aa17.61■□□□□ 0.41
TRIM27-207ENST00000498117 KCPQ6ZWJ8 1503 aa17.61■□□□□ 0.41
TRIM27-207ENST00000498117 ERVV-2B6SEH9 535 aa17.6■□□□□ 0.41
TRIM27-207ENST00000498117 C4AP0C0L4 1744 aa17.59■□□□□ 0.41
TRIM27-207ENST00000498117 HSP90AB1P08238 724 aaKnown RBP17.58■□□□□ 0.4
TRIM27-207ENST00000498117 BRCA1P38398 1863 aaKnown RBP17.57■□□□□ 0.4
TRIM27-207ENST00000498117 ARFGEF1Q9Y6D6 1849 aa17.57■□□□□ 0.4
TRIM27-207ENST00000498117 PCNTO95613 3336 aa17.57■□□□□ 0.4
TRIM27-207ENST00000498117 CARD14Q9BXL6 1004 aa17.57■□□□□ 0.4
TRIM27-207ENST00000498117 KIF20BQ96Q89 1820 aa17.56■□□□□ 0.4
TRIM27-207ENST00000498117 ZC3H4Q9UPT8 1303 aaKnown RBP17.56■□□□□ 0.4
TRIM27-207ENST00000498117 HSPA1AP0DMV8 641 aaKnown RBP17.55■□□□□ 0.4
TRIM27-207ENST00000498117 HSPA1BP0DMV9 641 aaKnown RBP17.55■□□□□ 0.4
TRIM27-207ENST00000498117 VEGFAP15692 232 aaPredicted RBP17.55■□□□□ 0.4
TRIM27-207ENST00000498117 CHRNA5P30532 468 aa17.55■□□□□ 0.4
TRIM27-207ENST00000498117 CABP4P57796 275 aa17.54■□□□□ 0.4
TRIM27-207ENST00000498117 FKBP8Q14318 412 aa17.54■□□□□ 0.4
TRIM27-207ENST00000498117 POLKQ9UBT6 870 aa17.54■□□□□ 0.4
TRIM27-207ENST00000498117 ZNF831Q5JPB2 1677 aa17.54■□□□□ 0.4
TRIM27-207ENST00000498117 CRKLP46109 303 aaKnown RBP17.53■□□□□ 0.4
TRIM27-207ENST00000498117 DDR1Q08345 913 aa17.53■□□□□ 0.4
TRIM27-207ENST00000498117 PLEKHO1Q53GL0 409 aaPredicted RBP17.53■□□□□ 0.4
TRIM27-207ENST00000498117 SRP68Q9UHB9 627 aaKnown RBP17.53■□□□□ 0.4
TRIM27-207ENST00000498117 USP42Q9H9J4 1324 aaKnown RBP17.52■□□□□ 0.4
TRIM27-207ENST00000498117 GLTPD2A6NH11 291 aa17.52■□□□□ 0.4
TRIM27-207ENST00000498117 PTCD1O75127 700 aaKnown RBP17.52■□□□□ 0.4
TRIM27-207ENST00000498117 EIF4A2Q14240 407 aaKnown RBP17.52■□□□□ 0.4
TRIM27-207ENST00000498117 TNRC6CQ9HCJ0 1690 aaKnown RBP17.52■□□□□ 0.39
TRIM27-207ENST00000498117 POLRMTO00411 1230 aaKnown RBP17.5■□□□□ 0.39
TRIM27-207ENST00000498117 LMNB1P20700 586 aa17.5■□□□□ 0.39
TRIM27-207ENST00000498117 TM4SF1P30408 202 aa17.5■□□□□ 0.39
TRIM27-207ENST00000498117 AMOTQ4VCS5 1084 aa17.5■□□□□ 0.39
TRIM27-207ENST00000498117 COL5A3P25940 1745 aaPredicted RBP17.5■□□□□ 0.39
TRIM27-207ENST00000498117 MYH14Q7Z406 1995 aaKnown RBP17.49■□□□□ 0.39
TRIM27-207ENST00000498117 MTHFSP49914 203 aa17.49■□□□□ 0.39
TRIM27-207ENST00000498117 RASSF7Q02833 373 aa17.49■□□□□ 0.39
TRIM27-207ENST00000498117 ZNF530Q6P9A1 599 aaPredicted RBP17.49■□□□□ 0.39
TRIM27-207ENST00000498117 SBF1O95248 1867 aa17.49■□□□□ 0.39
TRIM27-207ENST00000498117 ANKRD26Q9UPS8 1709 aa17.48■□□□□ 0.39
TRIM27-207ENST00000498117 ZPR1O75312 459 aa17.48■□□□□ 0.39
TRIM27-207ENST00000498117 NFATC2IPQ8NCF5 419 aa17.47■□□□□ 0.39
TRIM27-207ENST00000498117 KDM6AO15550 1401 aaPredicted RBP17.47■□□□□ 0.39
TRIM27-207ENST00000498117 C1orf141Q5JVX7 400 aa17.46■□□□□ 0.39
TRIM27-207ENST00000498117 DPY19L2Q6NUT2 758 aa17.46■□□□□ 0.39
TRIM27-207ENST00000498117 USPL1Q5W0Q7 1092 aa17.45■□□□□ 0.38
TRIM27-207ENST00000498117 INTS5Q6P9B9 1019 aaKnown RBP17.45■□□□□ 0.38
TRIM27-207ENST00000498117 TTLL6Q8N841 843 aa17.45■□□□□ 0.38
TRIM27-207ENST00000498117 TNNT2P45379 298 aaPredicted RBP17.44■□□□□ 0.38
TRIM27-207ENST00000498117 POTECB2RU33 542 aa17.42■□□□□ 0.38
TRIM27-207ENST00000498117 NFIXQ14938 502 aa17.42■□□□□ 0.38
TRIM27-207ENST00000498117 H0YIN7 160 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms