RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 SLC35F4A4IF30 521 aa5.77□□□□□ -1.49
RIF1-212ENST00000498041 LMOD1P29536 600 aaPredicted RBP5.77□□□□□ -1.49
RIF1-212ENST00000498041 TRIM50Q86XT4 487 aa5.77□□□□□ -1.49
RIF1-212ENST00000498041 GTF2IP78347 998 aa5.76□□□□□ -1.49
RIF1-212ENST00000498041 MAP3K10Q02779 954 aa5.76□□□□□ -1.49
RIF1-212ENST00000498041 CFAP70Q5T0N1 1121 aa5.76□□□□□ -1.49
RIF1-212ENST00000498041 ARHGEF10LQ9HCE6 1279 aa5.76□□□□□ -1.49
RIF1-212ENST00000498041 MKRN1Q9UHC7 482 aaKnown RBP5.76□□□□□ -1.49
RIF1-212ENST00000498041 PCDHGA11Q9Y5H2 935 aa5.76□□□□□ -1.49
RIF1-212ENST00000498041 MEN1O00255 615 aa5.75□□□□□ -1.49
RIF1-212ENST00000498041 SUPT5HO00267 1087 aaKnown RBP5.75□□□□□ -1.49
RIF1-212ENST00000498041 ADAMTS2O95450 1211 aa5.75□□□□□ -1.49
RIF1-212ENST00000498041 ATP1A2P50993 1020 aa5.75□□□□□ -1.49
RIF1-212ENST00000498041 CLN3Q13286 438 aa5.75□□□□□ -1.49
RIF1-212ENST00000498041 ESCO1Q5FWF5 840 aa5.75□□□□□ -1.49
RIF1-212ENST00000498041 LYPD4Q6UWN0 246 aa5.75□□□□□ -1.49
RIF1-212ENST00000498041 NANOS1Q8WY41 292 aaKnown RBP5.75□□□□□ -1.49
RIF1-212ENST00000498041 NLRP3Q96P20 1036 aa5.75□□□□□ -1.49
RIF1-212ENST00000498041 C1orf115Q9H7X2 142 aa5.75□□□□□ -1.49
RIF1-212ENST00000498041 RHOQP17081 205 aa5.74□□□□□ -1.49
RIF1-212ENST00000498041 PSME1Q06323 249 aa5.74□□□□□ -1.49
RIF1-212ENST00000498041 CCDC82Q8N4S0 544 aa5.74□□□□□ -1.49
RIF1-212ENST00000498041 CNKSR1Q969H4 720 aa5.74□□□□□ -1.49
RIF1-212ENST00000498041 XAGE2Q96GT9 111 aa5.74□□□□□ -1.49
RIF1-212ENST00000498041 ESYT1Q9BSJ8 1104 aa5.74□□□□□ -1.49
RIF1-212ENST00000498041 VRTNQ9H8Y1 702 aa5.74□□□□□ -1.49
RIF1-212ENST00000498041 RAB6BQ9NRW1 208 aa5.74□□□□□ -1.49
RIF1-212ENST00000498041 DNAAF2Q9NVR5 837 aaKnown RBP5.74□□□□□ -1.49
RIF1-212ENST00000498041 GPR25O00155 361 aa5.73□□□□□ -1.49
RIF1-212ENST00000498041 ARHGEF15O94989 841 aa5.73□□□□□ -1.49
RIF1-212ENST00000498041 IL2RAP01589 272 aa5.73□□□□□ -1.49
RIF1-212ENST00000498041 RFX1P22670 979 aa5.73□□□□□ -1.49
RIF1-212ENST00000498041 GPC1P35052 558 aa5.73□□□□□ -1.49
RIF1-212ENST00000498041 RNF144AP50876 292 aaPredicted RBP5.73□□□□□ -1.49
RIF1-212ENST00000498041 GDF10P55107 478 aa5.73□□□□□ -1.49
RIF1-212ENST00000498041 KANK4Q5T7N3 995 aaPredicted RBP5.73□□□□□ -1.49
RIF1-212ENST00000498041 PRICKLE2Q7Z3G6 844 aa5.73□□□□□ -1.49
RIF1-212ENST00000498041 LARGE2Q8N3Y3 721 aa5.73□□□□□ -1.49
RIF1-212ENST00000498041 OGFOD1Q8N543 542 aa5.73□□□□□ -1.49
RIF1-212ENST00000498041 RNF217Q8TC41 542 aa5.73□□□□□ -1.49
RIF1-212ENST00000498041 SCARF2Q96GP6 870 aaPredicted RBP5.73□□□□□ -1.49
RIF1-212ENST00000498041 ETNK1Q9HBU6 452 aa5.73□□□□□ -1.49
RIF1-212ENST00000498041 DNMT3AQ9Y6K1 912 aaPredicted RBP5.73□□□□□ -1.49
RIF1-212ENST00000498041 TMEM229AB2RXF0 380 aa5.72□□□□□ -1.49
RIF1-212ENST00000498041 WASLO00401 505 aaPredicted RBP5.72□□□□□ -1.49
RIF1-212ENST00000498041 ZBTB7BO15156 539 aaPredicted RBP5.72□□□□□ -1.49
RIF1-212ENST00000498041 STAU1O95793 577 aaKnown RBP5.72□□□□□ -1.49
RIF1-212ENST00000498041 INHAP05111 366 aa5.72□□□□□ -1.49
RIF1-212ENST00000498041 SLURP2P0DP57 97 aa5.72□□□□□ -1.49
RIF1-212ENST00000498041 RASA1P20936 1047 aa5.72□□□□□ -1.49
RIF1-212ENST00000498041 SCNN1DP51172 638 aa5.72□□□□□ -1.49
RIF1-212ENST00000498041 CLDN10P78369 228 aa5.72□□□□□ -1.49
RIF1-212ENST00000498041 FOXD4L5Q5VV16 416 aaPredicted RBP5.72□□□□□ -1.49
RIF1-212ENST00000498041 LARP1Q6PKG0 1096 aaKnown RBP5.72□□□□□ -1.49
RIF1-212ENST00000498041 BACH1O14867 736 aa5.71□□□□□ -1.5
RIF1-212ENST00000498041 CENPCQ03188 943 aa5.71□□□□□ -1.5
RIF1-212ENST00000498041 SLC27A3Q5K4L6 730 aa5.71□□□□□ -1.5
RIF1-212ENST00000498041 CCDC102BQ68D86 513 aa5.71□□□□□ -1.5
RIF1-212ENST00000498041 KANK3Q6NY19 840 aa5.71□□□□□ -1.5
RIF1-212ENST00000498041 RIPOR1Q6ZS17 1223 aa5.71□□□□□ -1.5
RIF1-212ENST00000498041 LYSMD3Q7Z3D4 306 aa5.71□□□□□ -1.5
RIF1-212ENST00000498041 TPCN2Q8NHX9 752 aa5.71□□□□□ -1.5
RIF1-212ENST00000498041 GRIP2Q9C0E4 1043 aa5.71□□□□□ -1.5
RIF1-212ENST00000498041 CUEDC1Q9NWM3 386 aaPredicted RBP5.71□□□□□ -1.5
RIF1-212ENST00000498041 KIAA1024Q9UPX6 916 aa5.71□□□□□ -1.5
RIF1-212ENST00000498041 RBM19Q9Y4C8 960 aaKnown RBP5.71□□□□□ -1.5
RIF1-212ENST00000498041 HRH3Q9Y5N1 445 aa5.71□□□□□ -1.5
RIF1-212ENST00000498041 CNTNAP5Q8WYK1 1306 aa5.71□□□□□ -1.5
RIF1-212ENST00000498041 SENP3-EIF4A1A0A087X0R7 540 aa5.7□□□□□ -1.5
RIF1-212ENST00000498041 FAM196BA6NMK8 535 aa5.7□□□□□ -1.5
RIF1-212ENST00000498041 CELA2BP08218 269 aaPredicted RBP5.7□□□□□ -1.5
RIF1-212ENST00000498041 CDCA8Q53HL2 280 aa5.7□□□□□ -1.5
RIF1-212ENST00000498041 SIX5Q8N196 739 aa5.7□□□□□ -1.5
RIF1-212ENST00000498041 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.7□□□□□ -1.5
RIF1-212ENST00000498041 NEDD1Q8NHV4 660 aa5.7□□□□□ -1.5
RIF1-212ENST00000498041 ZNF594Q96JF6 807 aaPredicted RBP5.7□□□□□ -1.5
RIF1-212ENST00000498041 SLC4A9Q96Q91 983 aa5.7□□□□□ -1.5
RIF1-212ENST00000498041 SERTAD1Q9UHV2 236 aa5.7□□□□□ -1.5
RIF1-212ENST00000498041 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.69□□□□□ -1.5
RIF1-212ENST00000498041 USP17L15C9J2P7 530 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 USP17L10C9JJH3 530 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 USP17L13C9JLJ4 530 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 USP17L12C9JPN9 530 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 USP17L11C9JVI0 530 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 USP17L21D6R901 530 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 USP17L18D6R9N7 530 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 USP17L22D6RA61 530 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 USP17L17D6RBQ6 530 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 USP17L19D6RCP7 530 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 USP17L20D6RJB6 530 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 IGHA1P01876 353 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 GTF2E1P29083 439 aaPredicted RBP5.69□□□□□ -1.5
RIF1-212ENST00000498041 SMTNP53814 917 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 SRPK2P78362 688 aaKnown RBP5.69□□□□□ -1.5
RIF1-212ENST00000498041 USP17L24Q0WX57 530 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 PTK7Q13308 1070 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 TLR1Q15399 786 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 CRTC2Q53ET0 693 aaPredicted RBP5.69□□□□□ -1.5
RIF1-212ENST00000498041 PBXIP1Q96AQ6 731 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 ZSCAN10Q96SZ4 725 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms