RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 ZBTB3Q9H5J0 574 aa9.41□□□□□ -0.9
NEB-216ENST00000497809 NRBP1Q9UHY1 535 aa9.41□□□□□ -0.9
NEB-216ENST00000497809 PRIMPOLQ96LW4 560 aa9.4□□□□□ -0.9
NEB-216ENST00000497809 MAP3K20Q9NYL2 800 aaKnown RBP9.4□□□□□ -0.9
NEB-216ENST00000497809 VTI1BQ9UEU0 232 aa9.4□□□□□ -0.9
NEB-216ENST00000497809 CFAP69A5D8W1 941 aa9.39□□□□□ -0.91
NEB-216ENST00000497809 SORBS3O60504 671 aa9.39□□□□□ -0.91
NEB-216ENST00000497809 TMC4Q7Z404 712 aa9.39□□□□□ -0.91
NEB-216ENST00000497809 EMILIN1Q9Y6C2 1016 aa9.39□□□□□ -0.91
NEB-216ENST00000497809 ST18O60284 1047 aa9.39□□□□□ -0.91
NEB-216ENST00000497809 LDHAP00338 332 aaKnown RBP9.39□□□□□ -0.91
NEB-216ENST00000497809 GOLGA2Q08379 1002 aa9.39□□□□□ -0.91
NEB-216ENST00000497809 SERINC3Q13530 473 aa9.39□□□□□ -0.91
NEB-216ENST00000497809 NCOA4Q13772 614 aa9.39□□□□□ -0.91
NEB-216ENST00000497809 PLEKHG4Q58EX7 1191 aa9.39□□□□□ -0.91
NEB-216ENST00000497809 SECISBP2LQ93073 1101 aaKnown RBP9.39□□□□□ -0.91
NEB-216ENST00000497809 MPHOSPH6Q99547 160 aaKnown RBP9.39□□□□□ -0.91
NEB-216ENST00000497809 EID1Q9Y6B2 187 aa9.39□□□□□ -0.91
NEB-216ENST00000497809 FMNL1O95466 1100 aaPredicted RBP9.38□□□□□ -0.91
NEB-216ENST00000497809 VIL1P09327 827 aaKnown RBP9.38□□□□□ -0.91
NEB-216ENST00000497809 LIG1P18858 919 aa9.38□□□□□ -0.91
NEB-216ENST00000497809 IRX5P78411 483 aaPredicted RBP9.38□□□□□ -0.91
NEB-216ENST00000497809 FMR1Q06787 632 aaKnown RBP eCLIP9.38□□□□□ -0.91
NEB-216ENST00000497809 RINLQ6ZS11 566 aa9.38□□□□□ -0.91
NEB-216ENST00000497809 CXXC1Q9P0U4 656 aaPredicted RBP9.38□□□□□ -0.91
NEB-216ENST00000497809 KIF3CO14782 793 aa9.37□□□□□ -0.91
NEB-216ENST00000497809 GNALP38405 381 aa9.37□□□□□ -0.91
NEB-216ENST00000497809 NR6A1Q15406 480 aa9.37□□□□□ -0.91
NEB-216ENST00000497809 CAPN12Q6ZSI9 719 aa9.37□□□□□ -0.91
NEB-216ENST00000497809 CHST12Q9NRB3 414 aa9.37□□□□□ -0.91
NEB-216ENST00000497809 LDHBP07195 334 aaKnown RBP9.37□□□□□ -0.91
NEB-216ENST00000497809 DAB2P98082 770 aa9.37□□□□□ -0.91
NEB-216ENST00000497809 ZNF594Q96JF6 807 aaPredicted RBP9.37□□□□□ -0.91
NEB-216ENST00000497809 SETDB2Q96T68 719 aa9.37□□□□□ -0.91
NEB-216ENST00000497809 KANSL2Q9H9L4 492 aa9.37□□□□□ -0.91
NEB-216ENST00000497809 GEMIN8Q9NWZ8 242 aaKnown RBP9.37□□□□□ -0.91
NEB-216ENST00000497809 SWAP70Q9UH65 585 aa9.37□□□□□ -0.91
NEB-216ENST00000497809 DDX41Q9UJV9 622 aaKnown RBP9.37□□□□□ -0.91
NEB-216ENST00000497809 EPB41L2O43491 1005 aaKnown RBP9.36□□□□□ -0.91
NEB-216ENST00000497809 KCNH2Q12809 1159 aa9.36□□□□□ -0.91
NEB-216ENST00000497809 MICALL2Q8IY33 904 aa9.36□□□□□ -0.91
NEB-216ENST00000497809 CACTIN-AS1Q8N1I8 211 aa9.36□□□□□ -0.91
NEB-216ENST00000497809 PRPF38AQ8NAV1 312 aaKnown RBP9.36□□□□□ -0.91
NEB-216ENST00000497809 TYW1Q9NV66 732 aaKnown RBP9.36□□□□□ -0.91
NEB-216ENST00000497809 SNPHO15079 494 aa9.35□□□□□ -0.91
NEB-216ENST00000497809 TREHO43280 583 aa9.35□□□□□ -0.91
NEB-216ENST00000497809 NEFMP07197 916 aa9.35□□□□□ -0.91
NEB-216ENST00000497809 ZNF280DQ6N043 979 aa9.35□□□□□ -0.91
NEB-216ENST00000497809 FERMT3Q86UX7 667 aa9.35□□□□□ -0.91
NEB-216ENST00000497809 WDR75Q8IWA0 830 aaKnown RBP9.35□□□□□ -0.91
NEB-216ENST00000497809 IPO4Q8TEX9 1081 aaKnown RBP9.35□□□□□ -0.91
NEB-216ENST00000497809 PRKAB1Q9Y478 270 aa9.35□□□□□ -0.91
NEB-216ENST00000497809 FKBP4Q02790 459 aaKnown RBP eCLIP9.35□□□□□ -0.91
NEB-216ENST00000497809 DPY19L2Q6NUT2 758 aa9.35□□□□□ -0.91
NEB-216ENST00000497809 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
NEB-216ENST00000497809 EPAS1Q99814 870 aa9.35□□□□□ -0.91
NEB-216ENST00000497809 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.35□□□□□ -0.91
NEB-216ENST00000497809 TMEM121BQ9BXQ6 578 aaPredicted RBP9.35□□□□□ -0.91
NEB-216ENST00000497809 OCEL1Q9H607 264 aa9.35□□□□□ -0.91
NEB-216ENST00000497809 PCDHGC3Q9UN70 934 aa9.35□□□□□ -0.91
NEB-216ENST00000497809 PPP1R12AO14974 1030 aaPredicted RBP9.34□□□□□ -0.91
NEB-216ENST00000497809 PRPF40AO75400 957 aaKnown RBP9.34□□□□□ -0.91
NEB-216ENST00000497809 LGR5O75473 907 aa9.34□□□□□ -0.91
NEB-216ENST00000497809 CLDN10P78369 228 aa9.34□□□□□ -0.91
NEB-216ENST00000497809 SYCP2LQ5T4T6 812 aa9.34□□□□□ -0.91
NEB-216ENST00000497809 TTC39BQ5VTQ0 682 aaPredicted RBP9.34□□□□□ -0.91
NEB-216ENST00000497809 ILDR1Q86SU0 546 aaPredicted RBP9.34□□□□□ -0.91
NEB-216ENST00000497809 FRMD6Q96NE9 622 aa9.34□□□□□ -0.91
NEB-216ENST00000497809 USP5P45974 858 aa9.33□□□□□ -0.92
NEB-216ENST00000497809 MAPK8P45983 427 aa9.33□□□□□ -0.92
NEB-216ENST00000497809 SAFB2Q14151 953 aaKnown RBP eCLIP9.33□□□□□ -0.92
NEB-216ENST00000497809 MKNK1Q9BUB5 465 aa9.33□□□□□ -0.92
NEB-216ENST00000497809 C12orf49Q9H741 205 aa9.33□□□□□ -0.92
NEB-216ENST00000497809 JADE2Q9NQC1 790 aa9.33□□□□□ -0.92
NEB-216ENST00000497809 CFAP99D6REC4 459 aa9.33□□□□□ -0.92
NEB-216ENST00000497809 ATP5J2-PTCD1G3V325 749 aa9.33□□□□□ -0.92
NEB-216ENST00000497809 PTMAP06454 111 aaKnown RBP9.33□□□□□ -0.92
NEB-216ENST00000497809 PSMD2Q13200 908 aa9.33□□□□□ -0.92
NEB-216ENST00000497809 CCSAPQ6IQ19 270 aaPredicted RBP9.33□□□□□ -0.92
NEB-216ENST00000497809 RNF135Q8IUD6 432 aa9.33□□□□□ -0.92
NEB-216ENST00000497809 FBXO45P0C2W1 286 aa9.32□□□□□ -0.92
NEB-216ENST00000497809 CCDC184Q52MB2 194 aa9.32□□□□□ -0.92
NEB-216ENST00000497809 OGFOD1Q8N543 542 aa9.32□□□□□ -0.92
NEB-216ENST00000497809 ARPC5LQ9BPX5 153 aa9.32□□□□□ -0.92
NEB-216ENST00000497809 RBCK1Q9BYM8 510 aa9.32□□□□□ -0.92
NEB-216ENST00000497809 ARHGEF10LQ9HCE6 1279 aa9.32□□□□□ -0.92
NEB-216ENST00000497809 DDX11L8A8MPP1 907 aa9.32□□□□□ -0.92
NEB-216ENST00000497809 CD53P19397 219 aa9.32□□□□□ -0.92
NEB-216ENST00000497809 GUCA2AQ02747 115 aa9.32□□□□□ -0.92
NEB-216ENST00000497809 USP48Q86UV5 1035 aa9.32□□□□□ -0.92
NEB-216ENST00000497809 PGBD3Q8N328 593 aa9.32□□□□□ -0.92
NEB-216ENST00000497809 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.32□□□□□ -0.92
NEB-216ENST00000497809 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.31□□□□□ -0.92
NEB-216ENST00000497809 FGAP02671 866 aa9.31□□□□□ -0.92
NEB-216ENST00000497809 HLA-CQ95604 372 aa9.31□□□□□ -0.92
NEB-216ENST00000497809 DKK1O94907 266 aa9.3□□□□□ -0.92
NEB-216ENST00000497809 PCGF5Q86SE9 256 aa9.3□□□□□ -0.92
NEB-216ENST00000497809 SDR16C5Q8N3Y7 309 aa9.3□□□□□ -0.92
NEB-216ENST00000497809 APBA2Q99767 749 aa9.3□□□□□ -0.92
NEB-216ENST00000497809 INO80BQ9C086 356 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms