RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 SORBS3O60504 671 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 GABBR2O75899 941 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 MAP4K4O95819 1239 aaPredicted RBP2.68□□□□□ -1.98
UBR4-217ENST00000497018 CTSHP09668 335 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 NUDT7P0C024 238 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 XRCC5P13010 732 aaKnown RBP2.68□□□□□ -1.98
UBR4-217ENST00000497018 DNAJA1P31689 397 aaKnown RBP2.68□□□□□ -1.98
UBR4-217ENST00000497018 GJA8P48165 433 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 MCCD1P59942 119 aaPredicted RBP2.68□□□□□ -1.98
UBR4-217ENST00000497018 RACK1P63244 317 aaKnown RBP2.68□□□□□ -1.98
UBR4-217ENST00000497018 GTF2IP78347 998 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 ARID5AQ03989 594 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 PTPN12Q05209 780 aaKnown RBP2.68□□□□□ -1.98
UBR4-217ENST00000497018 EHHADHQ08426 723 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 BMS1Q14692 1282 aaKnown RBP2.68□□□□□ -1.98
UBR4-217ENST00000497018 SWT1Q5T5J6 900 aaKnown RBP2.68□□□□□ -1.98
UBR4-217ENST00000497018 PMFBP1Q8TBY8 1022 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 STAG1Q8WVM7 1258 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 ALKBH8Q96BT7 664 aaKnown RBP2.68□□□□□ -1.98
UBR4-217ENST00000497018 MKNK1Q9BUB5 465 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 CFHR5Q9BXR6 569 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 MYH16Q9H6N6 1097 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 SRA1Q9HD15 236 aaKnown RBP2.68□□□□□ -1.98
UBR4-217ENST00000497018 CHPF2Q9P2E5 772 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 MAP10Q9P2G4 905 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 DDX41Q9UJV9 622 aaKnown RBP2.68□□□□□ -1.98
UBR4-217ENST00000497018 WWC3Q9ULE0 1092 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 NOD1Q9Y239 953 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 GPSM3Q9Y4H4 160 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 PCDHGA11Q9Y5H2 935 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 SETD1AO15047 1707 aaKnown RBP2.68□□□□□ -1.98
UBR4-217ENST00000497018 MYO15BQ96JP2 1530 aa2.68□□□□□ -1.98
UBR4-217ENST00000497018 GAPVD1Q14C86 1478 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 M0R2N6 131 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 FZD6O60353 706 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 PTCD1O75127 700 aaKnown RBP2.67□□□□□ -1.98
UBR4-217ENST00000497018 MPSTP25325 297 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 FGD1P98174 961 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 ENOX2Q16206 610 aaKnown RBP2.67□□□□□ -1.98
UBR4-217ENST00000497018 PLEKHG4Q58EX7 1191 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 MORN1Q5T089 497 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 GORABQ5T7V8 394 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 SOGA3Q5TF21 947 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 CCDC102BQ68D86 513 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 TPCN2Q8NHX9 752 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 ZNF526Q8TF50 670 aaPredicted RBP2.67□□□□□ -1.98
UBR4-217ENST00000497018 CRELD1Q96HD1 420 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 CITED4Q96RK1 184 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 PCDH12Q9NPG4 1184 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 MAGEC2Q9UBF1 373 aaPredicted RBP2.67□□□□□ -1.98
UBR4-217ENST00000497018 VTI1BQ9UEU0 232 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 PCDHGB7Q9Y5F8 929 aa2.67□□□□□ -1.98
UBR4-217ENST00000497018 NCAPD3P42695 1498 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 CEP164Q9UPV0 1460 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 TNFRSF10BO14763 440 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 SNPHO15079 494 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 NDUFB5O43674 189 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 LGR5O75473 907 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 CLSTN1O94985 981 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 FAM13AO94988 1023 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 CFHP08603 1231 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 GNA15P30679 374 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 ATP6V1AP38606 617 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 ANAPC15P60006 121 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 XPCQ01831 940 aaPredicted RBP2.66□□□□□ -1.98
UBR4-217ENST00000497018 PSMD2Q13200 908 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 PDE3BQ13370 1112 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 GNL2Q13823 731 aaKnown RBP2.66□□□□□ -1.98
UBR4-217ENST00000497018 PROX2Q3B8N5 592 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 ZNF394Q53GI3 561 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 ARSIQ5FYB1 569 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 TAF7LQ5H9L4 462 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 NBPF6Q5VWK0 638 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 PDXDC2PQ6P474 469 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 MAMSTRQ6ZN01 415 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 ZCRB1Q8TBF4 217 aaKnown RBP2.66□□□□□ -1.98
UBR4-217ENST00000497018 GPKOWQ92917 476 aaPredicted RBP eCLIP2.66□□□□□ -1.98
UBR4-217ENST00000497018 KHSRPQ92945 711 aaKnown RBP eCLIP2.66□□□□□ -1.98
UBR4-217ENST00000497018 RNPC3Q96LT9 517 aaKnown RBP2.66□□□□□ -1.98
UBR4-217ENST00000497018 NBPF4Q96M43 638 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 DMRTB1Q96MA1 342 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 CCDC87Q9NVE4 849 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 IFT57Q9NWB7 429 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 PCDHB9Q9Y5E1 797 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 HMGXB3Q12766 1538 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 SYNJ1O43426 1573 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 EIF4G3O43432 1585 aaKnown RBP2.66□□□□□ -1.98
UBR4-217ENST00000497018 DIP2BQ9P265 1576 aa2.66□□□□□ -1.98
UBR4-217ENST00000497018 SNAPC4Q5SXM2 1469 aa2.65□□□□□ -1.98
UBR4-217ENST00000497018 CLASP1Q7Z460 1538 aa2.65□□□□□ -1.99
UBR4-217ENST00000497018 SENP3-EIF4A1A0A087X0R7 540 aa2.65□□□□□ -1.99
UBR4-217ENST00000497018 ESPNB1AK53 854 aa2.65□□□□□ -1.99
UBR4-217ENST00000497018 U2SURPO15042 1029 aaKnown RBP2.65□□□□□ -1.99
UBR4-217ENST00000497018 FOXO3O43524 673 aa2.65□□□□□ -1.99
UBR4-217ENST00000497018 STK10O94804 968 aaKnown RBP2.65□□□□□ -1.99
UBR4-217ENST00000497018 ATF4P18848 351 aaPredicted RBP2.65□□□□□ -1.99
UBR4-217ENST00000497018 IGFBP4P22692 258 aa2.65□□□□□ -1.99
UBR4-217ENST00000497018 ITGAEP38570 1179 aa2.65□□□□□ -1.99
UBR4-217ENST00000497018 MAPK8P45983 427 aa2.65□□□□□ -1.99
UBR4-217ENST00000497018 EIF1AXP47813 144 aaKnown RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms