RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 XAGE2Q96GT9 111 aa8.36□□□□□ -1.07
CD46-218ENST00000496723 PHF24Q9UPV7 400 aa8.36□□□□□ -1.07
CD46-218ENST00000496723 HRH3Q9Y5N1 445 aa8.36□□□□□ -1.07
CD46-218ENST00000496723 CNTNAP5Q8WYK1 1306 aa8.35□□□□□ -1.07
CD46-218ENST00000496723 OIP5O43482 229 aa8.35□□□□□ -1.07
CD46-218ENST00000496723 IL2RAP01589 272 aa8.35□□□□□ -1.07
CD46-218ENST00000496723 ESCO1Q5FWF5 840 aa8.35□□□□□ -1.07
CD46-218ENST00000496723 ZSCAN10Q96SZ4 725 aaPredicted RBP8.35□□□□□ -1.07
CD46-218ENST00000496723 PRM3Q9NNZ6 103 aa8.35□□□□□ -1.07
CD46-218ENST00000496723 SNRKQ9NRH2 765 aa8.35□□□□□ -1.07
CD46-218ENST00000496723 RAB6BQ9NRW1 208 aa8.35□□□□□ -1.07
CD46-218ENST00000496723 GNASQ5JWF2 1037 aa8.34□□□□□ -1.07
CD46-218ENST00000496723 DCAF5Q96JK2 942 aa8.34□□□□□ -1.07
CD46-218ENST00000496723 CCDC85AQ96PX6 553 aaPredicted RBP8.34□□□□□ -1.07
CD46-218ENST00000496723 OXCT2Q9BYC2 517 aaPredicted RBP8.34□□□□□ -1.07
CD46-218ENST00000496723 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
CD46-218ENST00000496723 USP4Q13107 963 aa8.33□□□□□ -1.08
CD46-218ENST00000496723 TMEM132AQ24JP5 1023 aa8.33□□□□□ -1.08
CD46-218ENST00000496723 MSTNO14793 375 aa8.32□□□□□ -1.08
CD46-218ENST00000496723 CSB-PGBD3P0DP91 1061 aa8.32□□□□□ -1.08
CD46-218ENST00000496723 PLA2G4EQ3MJ16 856 aa8.32□□□□□ -1.08
CD46-218ENST00000496723 TMEM214Q6NUQ4 689 aaKnown RBP8.32□□□□□ -1.08
CD46-218ENST00000496723 PGBD3Q8N328 593 aa8.32□□□□□ -1.08
CD46-218ENST00000496723 CDCA7Q9BWT1 371 aaPredicted RBP8.32□□□□□ -1.08
CD46-218ENST00000496723 FHDC1Q9C0D6 1143 aaPredicted RBP8.32□□□□□ -1.08
CD46-218ENST00000496723 GPAMQ9HCL2 828 aa8.31□□□□□ -1.08
CD46-218ENST00000496723 GDF2Q9UK05 429 aaPredicted RBP8.31□□□□□ -1.08
CD46-218ENST00000496723 THBS1P07996 1170 aa8.3□□□□□ -1.08
CD46-218ENST00000496723 PHKA2P46019 1235 aa8.3□□□□□ -1.08
CD46-218ENST00000496723 PHTF2Q8N3S3 785 aa8.3□□□□□ -1.08
CD46-218ENST00000496723 SIRT1Q96EB6 747 aa8.3□□□□□ -1.08
CD46-218ENST00000496723 SLFNL1Q499Z3 407 aa8.29□□□□□ -1.08
CD46-218ENST00000496723 C4orf17Q53FE4 359 aa8.29□□□□□ -1.08
CD46-218ENST00000496723 EFHC2Q5JST6 749 aa8.29□□□□□ -1.08
CD46-218ENST00000496723 ALYREFQ86V81 257 aaKnown RBP8.29□□□□□ -1.08
CD46-218ENST00000496723 PPARGC1BQ86YN6 1023 aaKnown RBP8.29□□□□□ -1.08
CD46-218ENST00000496723 RHBDD1Q8TEB9 315 aa8.29□□□□□ -1.08
CD46-218ENST00000496723 ATXN7L1Q9ULK2 861 aaPredicted RBP8.29□□□□□ -1.08
CD46-218ENST00000496723 DOLKQ9UPQ8 538 aa8.29□□□□□ -1.08
CD46-218ENST00000496723 UBAP2LQ14157 1087 aaKnown RBP8.28□□□□□ -1.08
CD46-218ENST00000496723 GOLGA6L1Q8N7Z2 621 aa8.28□□□□□ -1.08
CD46-218ENST00000496723 KLRG1Q96E93 195 aa8.28□□□□□ -1.08
CD46-218ENST00000496723 CHIC2Q9UKJ5 165 aa8.28□□□□□ -1.08
CD46-218ENST00000496723 TBC1D2BQ9UPU7 963 aa8.28□□□□□ -1.08
CD46-218ENST00000496723 MSX1P28360 303 aa8.27□□□□□ -1.09
CD46-218ENST00000496723 GALNT6Q8NCL4 622 aa8.27□□□□□ -1.09
CD46-218ENST00000496723 SPOCK3Q9BQ16 436 aa8.27□□□□□ -1.09
CD46-218ENST00000496723 MKL2Q9ULH7 1088 aa8.27□□□□□ -1.09
CD46-218ENST00000496723 RNF135Q8IUD6 432 aa8.26□□□□□ -1.09
CD46-218ENST00000496723 CRISPLD1Q9H336 500 aa8.26□□□□□ -1.09
CD46-218ENST00000496723 RUBCNLQ9H714 662 aa8.26□□□□□ -1.09
CD46-218ENST00000496723 ETNK1Q9HBU6 452 aa8.26□□□□□ -1.09
CD46-218ENST00000496723 TLR1Q15399 786 aa8.25□□□□□ -1.09
CD46-218ENST00000496723 TSGA10IPQ3SY00 556 aa8.25□□□□□ -1.09
CD46-218ENST00000496723 FIGNL1Q6PIW4 674 aa8.25□□□□□ -1.09
CD46-218ENST00000496723 C1orf216Q8TAB5 229 aa8.25□□□□□ -1.09
CD46-218ENST00000496723 EDARADDQ8WWZ3 215 aa8.25□□□□□ -1.09
CD46-218ENST00000496723 NDFIP2Q9NV92 336 aa8.25□□□□□ -1.09
CD46-218ENST00000496723 SHISA8B8ZZ34 492 aa8.24□□□□□ -1.09
CD46-218ENST00000496723 ITGB2P05107 769 aa8.24□□□□□ -1.09
CD46-218ENST00000496723 BMP4P12644 408 aa8.24□□□□□ -1.09
CD46-218ENST00000496723 SNRPNP63162 240 aaKnown RBP8.24□□□□□ -1.09
CD46-218ENST00000496723 IRF5Q13568 498 aa8.24□□□□□ -1.09
CD46-218ENST00000496723 MAP7D1Q3KQU3 841 aa8.24□□□□□ -1.09
CD46-218ENST00000496723 PIK3R2O00459 728 aa8.23□□□□□ -1.09
CD46-218ENST00000496723 PROCP04070 461 aa8.23□□□□□ -1.09
CD46-218ENST00000496723 FGFR3P22607 806 aa8.23□□□□□ -1.09
CD46-218ENST00000496723 SLCO4C1Q6ZQN7 724 aa8.23□□□□□ -1.09
CD46-218ENST00000496723 TBC1D9Q6ZT07 1266 aa8.23□□□□□ -1.09
CD46-218ENST00000496723 BNIP3LO60238 219 aa8.22□□□□□ -1.09
CD46-218ENST00000496723 ADAM23O75077 832 aa8.22□□□□□ -1.09
CD46-218ENST00000496723 INHAP05111 366 aa8.22□□□□□ -1.09
CD46-218ENST00000496723 WASHC4Q2M389 1173 aa8.22□□□□□ -1.09
CD46-218ENST00000496723 OXLD1Q5BKU9 147 aa8.22□□□□□ -1.09
CD46-218ENST00000496723 C1orf229Q6ZS94 237 aaPredicted RBP8.22□□□□□ -1.09
CD46-218ENST00000496723 NLRP8Q86W28 1048 aa8.22□□□□□ -1.09
CD46-218ENST00000496723 ABHD17AQ96GS6 310 aa8.22□□□□□ -1.09
CD46-218ENST00000496723 RRAGCQ9HB90 399 aa8.22□□□□□ -1.09
CD46-218ENST00000496723 NIFKQ9BYG3 293 aaKnown RBP8.21□□□□□ -1.1
CD46-218ENST00000496723 PCDHGC4Q9Y5F7 938 aa8.21□□□□□ -1.1
CD46-218ENST00000496723 C2CD2LO14523 706 aa8.2□□□□□ -1.1
CD46-218ENST00000496723 ARAFP10398 606 aa8.2□□□□□ -1.1
CD46-218ENST00000496723 SCNN1DP51172 638 aa8.2□□□□□ -1.1
CD46-218ENST00000496723 GDF10P55107 478 aa8.2□□□□□ -1.1
CD46-218ENST00000496723 GGA1Q9UJY5 639 aa8.2□□□□□ -1.1
CD46-218ENST00000496723 KRBA1A5PL33 1030 aa8.19□□□□□ -1.1
CD46-218ENST00000496723 STAU1O95793 577 aaKnown RBP8.19□□□□□ -1.1
CD46-218ENST00000496723 AMPD1P23109 780 aa8.19□□□□□ -1.1
CD46-218ENST00000496723 SOX11P35716 441 aa8.19□□□□□ -1.1
CD46-218ENST00000496723 PLA2G4AP47712 749 aa8.19□□□□□ -1.1
CD46-218ENST00000496723 SMTNP53814 917 aa8.19□□□□□ -1.1
CD46-218ENST00000496723 CTBSQ01459 385 aa8.19□□□□□ -1.1
CD46-218ENST00000496723 ZCCHC2Q9C0B9 1178 aaKnown RBP8.19□□□□□ -1.1
CD46-218ENST00000496723 EPXP11678 715 aa8.18□□□□□ -1.1
CD46-218ENST00000496723 VAC14Q08AM6 782 aa8.18□□□□□ -1.1
CD46-218ENST00000496723 LINC00114Q6XXX2 140 aa8.18□□□□□ -1.1
CD46-218ENST00000496723 DNAAF2Q9NVR5 837 aaKnown RBP8.18□□□□□ -1.1
CD46-218ENST00000496723 GNB5O14775 395 aa8.17□□□□□ -1.1
CD46-218ENST00000496723 HOXB4P17483 251 aaPredicted RBP8.17□□□□□ -1.1
CD46-218ENST00000496723 ATP4AP20648 1035 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 236 ms