RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 CCDC87Q9NVE4 849 aa13.58□□□□□ -0.24
SH3D21-204ENST00000496636 SPG7Q9UQ90 795 aa13.58□□□□□ -0.24
SH3D21-204ENST00000496636 KIAA1551Q9HCM1 1747 aa13.58□□□□□ -0.24
SH3D21-204ENST00000496636 MAP2P11137 1827 aaKnown RBP13.57□□□□□ -0.24
SH3D21-204ENST00000496636 FCHSD2O94868 740 aa13.57□□□□□ -0.24
SH3D21-204ENST00000496636 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
SH3D21-204ENST00000496636 ITGB4P16144 1822 aa13.56□□□□□ -0.24
SH3D21-204ENST00000496636 FYB1O15117 783 aa13.56□□□□□ -0.24
SH3D21-204ENST00000496636 ATP6V1AP38606 617 aa13.56□□□□□ -0.24
SH3D21-204ENST00000496636 TMF1P82094 1093 aa13.56□□□□□ -0.24
SH3D21-204ENST00000496636 ITPK1Q13572 414 aa13.56□□□□□ -0.24
SH3D21-204ENST00000496636 C9orf131Q5VYM1 1079 aa13.56□□□□□ -0.24
SH3D21-204ENST00000496636 SMIM5Q71RC9 77 aa13.56□□□□□ -0.24
SH3D21-204ENST00000496636 TESK2Q96S53 571 aa13.56□□□□□ -0.24
SH3D21-204ENST00000496636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.56□□□□□ -0.247e-8■□□□□ 9.6
SH3D21-204ENST00000496636 RTCBQ9Y3I0 505 aaKnown RBP13.56□□□□□ -0.24
SH3D21-204ENST00000496636 A0A0G2JLW4 131 aa13.55□□□□□ -0.24
SH3D21-204ENST00000496636 CAPN15O75808 1086 aa13.55□□□□□ -0.24
SH3D21-204ENST00000496636 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
SH3D21-204ENST00000496636 GGNBP2Q9H3C7 697 aa13.55□□□□□ -0.24
SH3D21-204ENST00000496636 KDRP35968 1356 aa13.55□□□□□ -0.24
SH3D21-204ENST00000496636 C4AP0C0L4 1744 aa13.54□□□□□ -0.24
SH3D21-204ENST00000496636 DPEP1P16444 411 aa13.54□□□□□ -0.24
SH3D21-204ENST00000496636 SMC1BQ8NDV3 1235 aa13.54□□□□□ -0.24
SH3D21-204ENST00000496636 ZC3H4Q9UPT8 1303 aaKnown RBP13.54□□□□□ -0.24
SH3D21-204ENST00000496636 HTRA3P83110 453 aa13.53□□□□□ -0.24
SH3D21-204ENST00000496636 ASAP1Q9ULH1 1129 aa13.53□□□□□ -0.24
SH3D21-204ENST00000496636 PARP3Q9Y6F1 533 aa13.53□□□□□ -0.24
SH3D21-204ENST00000496636 TONSLQ96HA7 1378 aa13.53□□□□□ -0.24
SH3D21-204ENST00000496636 KCPQ6ZWJ8 1503 aa13.53□□□□□ -0.24
SH3D21-204ENST00000496636 TNRC6CQ9HCJ0 1690 aaKnown RBP13.53□□□□□ -0.24
SH3D21-204ENST00000496636 RC3H1Q5TC82 1133 aaKnown RBP13.52□□□□□ -0.25
SH3D21-204ENST00000496636 IFNL2Q8IZJ0 200 aa13.52□□□□□ -0.25
SH3D21-204ENST00000496636 DCAF5Q96JK2 942 aa13.52□□□□□ -0.25
SH3D21-204ENST00000496636 PIM2Q9P1W9 311 aa13.52□□□□□ -0.25
SH3D21-204ENST00000496636 CNTNAP4Q9C0A0 1308 aa13.52□□□□□ -0.25
SH3D21-204ENST00000496636 N4BP2Q86UW6 1770 aaPredicted RBP13.51□□□□□ -0.25
SH3D21-204ENST00000496636 ZNF831Q5JPB2 1677 aa13.51□□□□□ -0.25
SH3D21-204ENST00000496636 ST20-MTHFSA0A0A6YYL1 179 aa13.51□□□□□ -0.25
SH3D21-204ENST00000496636 GYS1P13807 737 aa13.51□□□□□ -0.25
SH3D21-204ENST00000496636 RFC4P35249 363 aa13.51□□□□□ -0.25
SH3D21-204ENST00000496636 DALRD3Q5D0E6 543 aaKnown RBP13.51□□□□□ -0.25
SH3D21-204ENST00000496636 RNF181Q9P0P0 153 aa13.51□□□□□ -0.25
SH3D21-204ENST00000496636 BRCA1P38398 1863 aaKnown RBP13.5□□□□□ -0.25
SH3D21-204ENST00000496636 PHKG2P15735 406 aa13.5□□□□□ -0.25
SH3D21-204ENST00000496636 ATG3Q9NT62 314 aa13.5□□□□□ -0.25
SH3D21-204ENST00000496636 ARFGEF1Q9Y6D6 1849 aa13.5□□□□□ -0.25
SH3D21-204ENST00000496636 KIF20BQ96Q89 1820 aa13.49□□□□□ -0.25
SH3D21-204ENST00000496636 ARHGEF1Q92888 912 aaKnown RBP13.49□□□□□ -0.25
SH3D21-204ENST00000496636 RPS6KA4O75676 772 aa13.48□□□□□ -0.25
SH3D21-204ENST00000496636 HSPA1AP0DMV8 641 aaKnown RBP13.48□□□□□ -0.25
SH3D21-204ENST00000496636 HSPA1BP0DMV9 641 aaKnown RBP13.48□□□□□ -0.25
SH3D21-204ENST00000496636 KCNA3P22001 575 aa13.48□□□□□ -0.25
SH3D21-204ENST00000496636 CDCA8Q53HL2 280 aa13.48□□□□□ -0.25
SH3D21-204ENST00000496636 RRAGCQ9HB90 399 aa13.48□□□□□ -0.25
SH3D21-204ENST00000496636 EMILIN1Q9Y6C2 1016 aa13.48□□□□□ -0.25
SH3D21-204ENST00000496636 ANKRD26Q9UPS8 1709 aa13.47□□□□□ -0.25
SH3D21-204ENST00000496636 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
SH3D21-204ENST00000496636 ERVV-2B6SEH9 535 aa13.47□□□□□ -0.25
SH3D21-204ENST00000496636 HSP90AB1P08238 724 aaKnown RBP13.47□□□□□ -0.25
SH3D21-204ENST00000496636 COL5A3P25940 1745 aaPredicted RBP13.46□□□□□ -0.25
SH3D21-204ENST00000496636 KDM6AO15550 1401 aaPredicted RBP13.46□□□□□ -0.26
SH3D21-204ENST00000496636 PPM1GO15355 546 aaPredicted RBP13.45□□□□□ -0.26
SH3D21-204ENST00000496636 VEGFAP15692 232 aaPredicted RBP13.45□□□□□ -0.26
SH3D21-204ENST00000496636 SLC4A9Q96Q91 983 aa13.45□□□□□ -0.26
SH3D21-204ENST00000496636 EYA1Q99502 592 aa13.45□□□□□ -0.26
SH3D21-204ENST00000496636 RBM42Q9BTD8 480 aaKnown RBP13.45□□□□□ -0.26
SH3D21-204ENST00000496636 USP42Q9H9J4 1324 aaKnown RBP13.44□□□□□ -0.26
SH3D21-204ENST00000496636 LMNB1P20700 586 aa13.43□□□□□ -0.26
SH3D21-204ENST00000496636 GLTPD2A6NH11 291 aa13.42□□□□□ -0.26
SH3D21-204ENST00000496636 DDR1Q08345 913 aa13.42□□□□□ -0.26
SH3D21-204ENST00000496636 CHRNA5P30532 468 aa13.41□□□□□ -0.26
SH3D21-204ENST00000496636 CABP4P57796 275 aa13.41□□□□□ -0.26
SH3D21-204ENST00000496636 FKBP8Q14318 412 aa13.41□□□□□ -0.26
SH3D21-204ENST00000496636 CRKLP46109 303 aaKnown RBP13.4□□□□□ -0.26
SH3D21-204ENST00000496636 POLRMTO00411 1230 aaKnown RBP13.39□□□□□ -0.27
SH3D21-204ENST00000496636 RASSF7Q02833 373 aa13.39□□□□□ -0.27
SH3D21-204ENST00000496636 AMOTQ4VCS5 1084 aa13.39□□□□□ -0.27
SH3D21-204ENST00000496636 PLEKHO1Q53GL0 409 aaPredicted RBP13.39□□□□□ -0.27
SH3D21-204ENST00000496636 SRP68Q9UHB9 627 aaKnown RBP13.39□□□□□ -0.27
SH3D21-204ENST00000496636 EIF4A2Q14240 407 aaKnown RBP13.38□□□□□ -0.27
SH3D21-204ENST00000496636 CARD14Q9BXL6 1004 aa13.38□□□□□ -0.27
SH3D21-204ENST00000496636 PTCD1O75127 700 aaKnown RBP13.37□□□□□ -0.27
SH3D21-204ENST00000496636 ZPR1O75312 459 aa13.37□□□□□ -0.27
SH3D21-204ENST00000496636 TM4SF1P30408 202 aa13.37□□□□□ -0.27
SH3D21-204ENST00000496636 ZNF530Q6P9A1 599 aaPredicted RBP13.37□□□□□ -0.27
SH3D21-204ENST00000496636 CREBZFQ9NS37 354 aa13.37□□□□□ -0.27
SH3D21-204ENST00000496636 POLKQ9UBT6 870 aa13.37□□□□□ -0.27
SH3D21-204ENST00000496636 MYH14Q7Z406 1995 aaKnown RBP13.36□□□□□ -0.27
SH3D21-204ENST00000496636 SBF1O95248 1867 aa13.36□□□□□ -0.27
SH3D21-204ENST00000496636 C1orf141Q5JVX7 400 aa13.36□□□□□ -0.27
SH3D21-204ENST00000496636 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
SH3D21-204ENST00000496636 TTLL6Q8N841 843 aa13.36□□□□□ -0.27
SH3D21-204ENST00000496636 PRDM10Q9NQV6 1147 aa13.36□□□□□ -0.27
SH3D21-204ENST00000496636 TIAM2Q8IVF5 1701 aa13.36□□□□□ -0.27
SH3D21-204ENST00000496636 SLC34A2O95436 690 aa13.35□□□□□ -0.27
SH3D21-204ENST00000496636 MTHFSP49914 203 aa13.35□□□□□ -0.27
SH3D21-204ENST00000496636 TJP1Q07157 1748 aa13.34□□□□□ -0.27
SH3D21-204ENST00000496636 SOS1Q07889 1333 aaPredicted RBP13.34□□□□□ -0.27
SH3D21-204ENST00000496636 NFKBIEO00221 500 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms