RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 WWC3Q9ULE0 1092 aa14.89□□□□□ -0.03
RNF220-217ENST00000496262 KNSTRNQ9Y448 316 aa14.89□□□□□ -0.03
RNF220-217ENST00000496262 ZNF530Q6P9A1 599 aaPredicted RBP14.88□□□□□ -0.03
RNF220-217ENST00000496262 CHD4Q14839 1912 aa14.88□□□□□ -0.03
RNF220-217ENST00000496262 PLEKHO1Q53GL0 409 aaPredicted RBP14.87□□□□□ -0.03
RNF220-217ENST00000496262 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
RNF220-217ENST00000496262 SSFA2P28290 1259 aa14.86□□□□□ -0.03
RNF220-217ENST00000496262 DCAF5Q96JK2 942 aa14.86□□□□□ -0.03
RNF220-217ENST00000496262 CD2APQ9Y5K6 639 aa14.86□□□□□ -0.03
RNF220-217ENST00000496262 UBR3Q6ZT12 1888 aa14.86□□□□□ -0.03
RNF220-217ENST00000496262 KDM6AO15550 1401 aaPredicted RBP14.85□□□□□ -0.03
RNF220-217ENST00000496262 GRIN3BO60391 1043 aa14.85□□□□□ -0.03
RNF220-217ENST00000496262 CABP4P57796 275 aa14.85□□□□□ -0.03
RNF220-217ENST00000496262 SULT6B1Q6IMI4 303 aa14.85□□□□□ -0.03
RNF220-217ENST00000496262 ERVV-2B6SEH9 535 aa14.84□□□□□ -0.03
RNF220-217ENST00000496262 HSP90AB1P08238 724 aaKnown RBP14.84□□□□□ -0.03
RNF220-217ENST00000496262 C1orf141Q5JVX7 400 aa14.84□□□□□ -0.03
RNF220-217ENST00000496262 KIF7Q2M1P5 1343 aa14.84□□□□□ -0.03
RNF220-217ENST00000496262 KDRP35968 1356 aa14.84□□□□□ -0.03
RNF220-217ENST00000496262 MTHFSP49914 203 aa14.83□□□□□ -0.04
RNF220-217ENST00000496262 CNGB1Q14028 1251 aaPredicted RBP14.83□□□□□ -0.04
RNF220-217ENST00000496262 AMOTQ4VCS5 1084 aa14.83□□□□□ -0.04
RNF220-217ENST00000496262 PIAS4Q8N2W9 510 aaPredicted RBP14.83□□□□□ -0.04
RNF220-217ENST00000496262 SLC4A9Q96Q91 983 aa14.83□□□□□ -0.04
RNF220-217ENST00000496262 PLEKHG2Q9H7P9 1386 aa14.83□□□□□ -0.04
RNF220-217ENST00000496262 ZNF316A6NFI3 1004 aaPredicted RBP14.82□□□□□ -0.04
RNF220-217ENST00000496262 RTCBQ9Y3I0 505 aaKnown RBP14.82□□□□□ -0.04
RNF220-217ENST00000496262 SENP3-EIF4A1A0A087X0R7 540 aa14.81□□□□□ -0.04
RNF220-217ENST00000496262 PTCD1O75127 700 aaKnown RBP14.81□□□□□ -0.04
RNF220-217ENST00000496262 GIGYF1O75420 1035 aaPredicted RBP14.81□□□□□ -0.04
RNF220-217ENST00000496262 MMP10P09238 476 aa14.81□□□□□ -0.04
RNF220-217ENST00000496262 IL13P35225 146 aa14.81□□□□□ -0.04
RNF220-217ENST00000496262 AMER1Q5JTC6 1135 aaPredicted RBP14.81□□□□□ -0.04
RNF220-217ENST00000496262 TRAPPC3LQ5T215 181 aa14.81□□□□□ -0.04
RNF220-217ENST00000496262 C1QTNF8P60827 252 aa14.8□□□□□ -0.04
RNF220-217ENST00000496262 CC2D1BQ5T0F9 858 aaKnown RBP14.8□□□□□ -0.04
RNF220-217ENST00000496262 NFATC2IPQ8NCF5 419 aa14.8□□□□□ -0.04
RNF220-217ENST00000496262 HMOX1P09601 288 aa14.79□□□□□ -0.04
RNF220-217ENST00000496262 ADRA2BP18089 450 aa14.79□□□□□ -0.04
RNF220-217ENST00000496262 ARHGEF1Q92888 912 aaKnown RBP14.78□□□□□ -0.04
RNF220-217ENST00000496262 CICQ96RK0 1608 aaPredicted RBP14.77□□□□□ -0.04
RNF220-217ENST00000496262 ATP10DQ9P241 1426 aa14.77□□□□□ -0.04
RNF220-217ENST00000496262 CNTNAP4Q9C0A0 1308 aa14.77□□□□□ -0.04
RNF220-217ENST00000496262 RFC4P35249 363 aa14.77□□□□□ -0.05
RNF220-217ENST00000496262 ZNF526Q8TF50 670 aaPredicted RBP14.77□□□□□ -0.05
RNF220-217ENST00000496262 COL5A3P25940 1745 aaPredicted RBP14.76□□□□□ -0.05
RNF220-217ENST00000496262 GTF3C3Q9Y5Q9 886 aa14.76□□□□□ -0.05
RNF220-217ENST00000496262 RPS6KA4O75676 772 aa14.75□□□□□ -0.05
RNF220-217ENST00000496262 CRKLP46109 303 aaKnown RBP14.75□□□□□ -0.05
RNF220-217ENST00000496262 RC3H1Q5TC82 1133 aaKnown RBP14.75□□□□□ -0.05
RNF220-217ENST00000496262 NLGN1Q8N2Q7 840 aa14.75□□□□□ -0.05
RNF220-217ENST00000496262 GYS1P13807 737 aa14.74□□□□□ -0.05
RNF220-217ENST00000496262 AKAP4Q5JQC9 854 aa14.74□□□□□ -0.05
RNF220-217ENST00000496262 LGR6Q9HBX8 967 aa14.74□□□□□ -0.05
RNF220-217ENST00000496262 SRP68Q9UHB9 627 aaKnown RBP14.74□□□□□ -0.05
RNF220-217ENST00000496262 PXDNLA1KZ92 1463 aa14.74□□□□□ -0.05
RNF220-217ENST00000496262 ZNF831Q5JPB2 1677 aa14.74□□□□□ -0.05
RNF220-217ENST00000496262 A0A0G2JLW4 131 aa14.73□□□□□ -0.05
RNF220-217ENST00000496262 DIAPH1O60610 1272 aaKnown RBP14.73□□□□□ -0.05
RNF220-217ENST00000496262 GPBP1L1Q9HC44 474 aaPredicted RBP14.73□□□□□ -0.05
RNF220-217ENST00000496262 PARP3Q9Y6F1 533 aa14.73□□□□□ -0.05
RNF220-217ENST00000496262 PER1O15534 1290 aaPredicted RBP14.72□□□□□ -0.05
RNF220-217ENST00000496262 SLC39A6Q13433 755 aa14.72□□□□□ -0.05
RNF220-217ENST00000496262 MTHFSDQ2M296 383 aaKnown RBP14.72□□□□□ -0.05
RNF220-217ENST00000496262 SLC52A2Q9HAB3 445 aa14.72□□□□□ -0.05
RNF220-217ENST00000496262 CCDC87Q9NVE4 849 aa14.72□□□□□ -0.05
RNF220-217ENST00000496262 BCS1LQ9Y276 419 aa14.72□□□□□ -0.05
RNF220-217ENST00000496262 C10orf71Q711Q0 1435 aa14.72□□□□□ -0.05
RNF220-217ENST00000496262 C4AP0C0L4 1744 aa14.72□□□□□ -0.05
RNF220-217ENST00000496262 TJP1Q07157 1748 aa14.72□□□□□ -0.05
RNF220-217ENST00000496262 SCN11AQ9UI33 1791 aa14.71□□□□□ -0.05
RNF220-217ENST00000496262 RNMTO43148 476 aaKnown RBP14.71□□□□□ -0.05
RNF220-217ENST00000496262 DPEP1P16444 411 aa14.71□□□□□ -0.05
RNF220-217ENST00000496262 DNAJC10Q8IXB1 793 aa14.71□□□□□ -0.05
RNF220-217ENST00000496262 U2SURPO15042 1029 aaKnown RBP14.7□□□□□ -0.06
RNF220-217ENST00000496262 FKBP8Q14318 412 aa14.7□□□□□ -0.06
RNF220-217ENST00000496262 MYH14Q7Z406 1995 aaKnown RBP14.7□□□□□ -0.06
RNF220-217ENST00000496262 ADCY9O60503 1353 aa14.7□□□□□ -0.06
RNF220-217ENST00000496262 N4BP2Q86UW6 1770 aaPredicted RBP14.7□□□□□ -0.06
RNF220-217ENST00000496262 USP42Q9H9J4 1324 aaKnown RBP14.69□□□□□ -0.06
RNF220-217ENST00000496262 TGFB2P61812 414 aa14.69□□□□□ -0.06
RNF220-217ENST00000496262 INTS5Q6P9B9 1019 aaKnown RBP14.69□□□□□ -0.06
RNF220-217ENST00000496262 DDR1Q08345 913 aa14.68□□□□□ -0.06
RNF220-217ENST00000496262 ARHGAP27Q6ZUM4 889 aa14.68□□□□□ -0.06
RNF220-217ENST00000496262 KIAA1551Q9HCM1 1747 aa14.68□□□□□ -0.06
RNF220-217ENST00000496262 MRC1P22897 1456 aa14.68□□□□□ -0.06
RNF220-217ENST00000496262 ZPR1O75312 459 aa14.67□□□□□ -0.06
RNF220-217ENST00000496262 FCHSD2O94868 740 aa14.67□□□□□ -0.06
RNF220-217ENST00000496262 COL3A1P02461 1466 aaPredicted RBP14.67□□□□□ -0.06
RNF220-217ENST00000496262 KCPQ6ZWJ8 1503 aa14.66□□□□□ -0.06
RNF220-217ENST00000496262 KIF13BQ9NQT8 1826 aa14.66□□□□□ -0.06
RNF220-217ENST00000496262 USPL1Q5W0Q7 1092 aa14.66□□□□□ -0.06
RNF220-217ENST00000496262 SOS1Q07889 1333 aaPredicted RBP14.66□□□□□ -0.06
RNF220-217ENST00000496262 CYP19A1P11511 503 aaPredicted RBP14.65□□□□□ -0.06
RNF220-217ENST00000496262 TTC5Q8N0Z6 440 aa14.65□□□□□ -0.06
RNF220-217ENST00000496262 ZBTB1Q9Y2K1 713 aa14.65□□□□□ -0.06
RNF220-217ENST00000496262 COL15A1P39059 1388 aa14.64□□□□□ -0.07
RNF220-217ENST00000496262 CANXP27824 592 aaKnown RBP14.64□□□□□ -0.07
RNF220-217ENST00000496262 CHRNA5P30532 468 aa14.64□□□□□ -0.07
RNF220-217ENST00000496262 NPC1L1Q9UHC9 1359 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms