RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 POLA1P09884 1462 aaPredicted RBP9.13□□□□□ -0.95
GAPVD1-218ENST00000495588 MEN1O00255 615 aa9.12□□□□□ -0.95
GAPVD1-218ENST00000495588 OIP5O43482 229 aa9.12□□□□□ -0.95
GAPVD1-218ENST00000495588 BAG6P46379 1132 aa9.11□□□□□ -0.95
GAPVD1-218ENST00000495588 ATP1B4Q9UN42 357 aaPredicted RBP9.11□□□□□ -0.95
GAPVD1-218ENST00000495588 RAD54L2Q9Y4B4 1467 aa9.1□□□□□ -0.95
GAPVD1-218ENST00000495588 SLC27A3Q5K4L6 730 aa9.1□□□□□ -0.95
GAPVD1-218ENST00000495588 ALYREFQ86V81 257 aaKnown RBP9.1□□□□□ -0.95
GAPVD1-218ENST00000495588 CUX2O14529 1486 aa9.09□□□□□ -0.95
GAPVD1-218ENST00000495588 AP1G2O75843 785 aa9.09□□□□□ -0.95
GAPVD1-218ENST00000495588 MAP2K3P46734 347 aa9.09□□□□□ -0.95
GAPVD1-218ENST00000495588 POU4F2Q12837 409 aa9.09□□□□□ -0.95
GAPVD1-218ENST00000495588 Q8N3U1 123 aa9.09□□□□□ -0.95
GAPVD1-218ENST00000495588 OXCT2Q9BYC2 517 aaPredicted RBP9.09□□□□□ -0.95
GAPVD1-218ENST00000495588 MKL2Q9ULH7 1088 aa9.09□□□□□ -0.95
GAPVD1-218ENST00000495588 SOGA1O94964 1423 aa9.08□□□□□ -0.96
GAPVD1-218ENST00000495588 A0A1W2PRU2 124 aa9.08□□□□□ -0.96
GAPVD1-218ENST00000495588 SH3D19Q5HYK7 790 aa9.08□□□□□ -0.96
GAPVD1-218ENST00000495588 NLRP3Q96P20 1036 aa9.08□□□□□ -0.96
GAPVD1-218ENST00000495588 NUCKS1Q9H1E3 243 aaKnown RBP9.08□□□□□ -0.96
GAPVD1-218ENST00000495588 WDR97A6NE52 1622 aa9.07□□□□□ -0.96
GAPVD1-218ENST00000495588 TARBP1Q13395 1621 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-218ENST00000495588 KRBA1A5PL33 1030 aa9.07□□□□□ -0.96
GAPVD1-218ENST00000495588 SNRPNP63162 240 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-218ENST00000495588 SKIV2LQ15477 1246 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-218ENST00000495588 C14orf37Q86TY3 774 aa9.07□□□□□ -0.96
GAPVD1-218ENST00000495588 EPS8L1Q8TE68 723 aa9.07□□□□□ -0.96
GAPVD1-218ENST00000495588 KRTAP4-8Q9BYQ9 185 aa9.07□□□□□ -0.96
GAPVD1-218ENST00000495588 RUSC2Q8N2Y8 1516 aa9.05□□□□□ -0.96
GAPVD1-218ENST00000495588 ABCA10Q8WWZ4 1543 aa9.05□□□□□ -0.96
GAPVD1-218ENST00000495588 IFT140Q96RY7 1462 aa9.05□□□□□ -0.96
GAPVD1-218ENST00000495588 FURINP09958 794 aa9.05□□□□□ -0.96
GAPVD1-218ENST00000495588 WDR44Q5JSH3 913 aa9.05□□□□□ -0.96
GAPVD1-218ENST00000495588 NBPF10Q6P3W6 841 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-218ENST00000495588 NBPF15Q8N660 670 aa9.05□□□□□ -0.96
GAPVD1-218ENST00000495588 RRAGCQ9HB90 399 aa9.05□□□□□ -0.96
GAPVD1-218ENST00000495588 F11P03951 625 aa9.04□□□□□ -0.96
GAPVD1-218ENST00000495588 FBXO31Q5XUX0 539 aaPredicted RBP9.04□□□□□ -0.96
GAPVD1-218ENST00000495588 CCDC125Q86Z20 511 aa9.04□□□□□ -0.96
GAPVD1-218ENST00000495588 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.04□□□□□ -0.96
GAPVD1-218ENST00000495588 TIMMDC1Q9NPL8 285 aa9.04□□□□□ -0.96
GAPVD1-218ENST00000495588 CC2D2BQ6DHV5 1058 aa9.03□□□□□ -0.96
GAPVD1-218ENST00000495588 CFHR5Q9BXR6 569 aa9.03□□□□□ -0.96
GAPVD1-218ENST00000495588 GRIP2Q9C0E4 1043 aa9.03□□□□□ -0.96
GAPVD1-218ENST00000495588 GDF2Q9UK05 429 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-218ENST00000495588 ZNF608Q9ULD9 1512 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-218ENST00000495588 SPATA31C2B4DYI2 1134 aa9.02□□□□□ -0.97
GAPVD1-218ENST00000495588 SHISA8B8ZZ34 492 aa9.02□□□□□ -0.97
GAPVD1-218ENST00000495588 GIGYF1O75420 1035 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-218ENST00000495588 USP17L8P0C7I0 530 aa9.02□□□□□ -0.97
GAPVD1-218ENST00000495588 TAS1R3Q7RTX0 852 aa9.02□□□□□ -0.97
GAPVD1-218ENST00000495588 CYP2U1Q7Z449 544 aa9.02□□□□□ -0.97
GAPVD1-218ENST00000495588 FAM9AQ8IZU1 332 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-218ENST00000495588 PROCA1Q8NCQ7 364 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-218ENST00000495588 HMX1Q9NP08 348 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-218ENST00000495588 PHF24Q9UPV7 400 aa9.02□□□□□ -0.97
GAPVD1-218ENST00000495588 TDRD9Q8NDG6 1382 aaKnown RBP9.01□□□□□ -0.97
GAPVD1-218ENST00000495588 WASLO00401 505 aaPredicted RBP9.01□□□□□ -0.97
GAPVD1-218ENST00000495588 ERVK-9P63128 1117 aa9.01□□□□□ -0.97
GAPVD1-218ENST00000495588 CLN3Q13286 438 aa9.01□□□□□ -0.97
GAPVD1-218ENST00000495588 KIF27Q86VH2 1401 aa9.01□□□□□ -0.97
GAPVD1-218ENST00000495588 PSMG3-AS1Q96PY0 264 aa9.01□□□□□ -0.97
GAPVD1-218ENST00000495588 PCDHB9Q9Y5E1 797 aa9.01□□□□□ -0.97
GAPVD1-218ENST00000495588 ABCA5Q8WWZ7 1642 aa9.01□□□□□ -0.97
GAPVD1-218ENST00000495588 PIK3R2O00459 728 aa9□□□□□ -0.97
GAPVD1-218ENST00000495588 COL8A1P27658 744 aa9□□□□□ -0.97
GAPVD1-218ENST00000495588 GRIN2CQ14957 1233 aa9□□□□□ -0.97
GAPVD1-218ENST00000495588 EDARADDQ8WWZ3 215 aa9□□□□□ -0.97
GAPVD1-218ENST00000495588 PCMTD1Q96MG8 357 aaPredicted RBP9□□□□□ -0.97
GAPVD1-218ENST00000495588 AQRO60306 1485 aaKnown RBP eCLIP9□□□□□ -0.97
GAPVD1-218ENST00000495588 EIF4G3O43432 1585 aaKnown RBP8.99□□□□□ -0.97
GAPVD1-218ENST00000495588 EEA1Q15075 1411 aa8.99□□□□□ -0.97
GAPVD1-218ENST00000495588 AMPD1P23109 780 aa8.99□□□□□ -0.97
GAPVD1-218ENST00000495588 RNF20Q5VTR2 975 aa8.99□□□□□ -0.97
GAPVD1-218ENST00000495588 KLRG1Q96E93 195 aa8.99□□□□□ -0.97
GAPVD1-218ENST00000495588 GAPVD1Q14C86 1478 aa8.99□□□□□ -0.97
GAPVD1-218ENST00000495588 GOLGA6L1Q8N7Z2 621 aa8.98□□□□□ -0.97
GAPVD1-218ENST00000495588 ESF1Q9H501 851 aaKnown RBP8.98□□□□□ -0.97
GAPVD1-218ENST00000495588 PBRM1Q86U86 1689 aa8.97□□□□□ -0.97
GAPVD1-218ENST00000495588 C1orf229Q6ZS94 237 aaPredicted RBP8.97□□□□□ -0.97
GAPVD1-218ENST00000495588 ARHGEF10LQ9HCE6 1279 aa8.97□□□□□ -0.97
GAPVD1-218ENST00000495588 GPAMQ9HCL2 828 aa8.97□□□□□ -0.97
GAPVD1-218ENST00000495588 ZBBXA8MT70 800 aa8.96□□□□□ -0.98
GAPVD1-218ENST00000495588 FLIIQ13045 1269 aa8.96□□□□□ -0.98
GAPVD1-218ENST00000495588 ERICH3Q5RHP9 1530 aa8.95□□□□□ -0.98
GAPVD1-218ENST00000495588 A0A1B0GTH6 734 aa8.94□□□□□ -0.98
GAPVD1-218ENST00000495588 GNB5O14775 395 aa8.94□□□□□ -0.98
GAPVD1-218ENST00000495588 LBRQ14739 615 aaKnown RBP8.94□□□□□ -0.98
GAPVD1-218ENST00000495588 GRIN2BQ13224 1484 aa8.94□□□□□ -0.98
GAPVD1-218ENST00000495588 C1QTNF9BB2RNN3 333 aa8.93□□□□□ -0.98
GAPVD1-218ENST00000495588 THBS1P07996 1170 aa8.93□□□□□ -0.98
GAPVD1-218ENST00000495588 CSB-PGBD3P0DP91 1061 aa8.93□□□□□ -0.98
GAPVD1-218ENST00000495588 BMP4P12644 408 aa8.93□□□□□ -0.98
GAPVD1-218ENST00000495588 SCTRP47872 440 aa8.93□□□□□ -0.98
GAPVD1-218ENST00000495588 LINC00114Q6XXX2 140 aa8.93□□□□□ -0.98
GAPVD1-218ENST00000495588 PGBD3Q8N328 593 aa8.93□□□□□ -0.98
GAPVD1-218ENST00000495588 SUV39H2Q9H5I1 410 aa8.93□□□□□ -0.98
GAPVD1-218ENST00000495588 CUL7Q14999 1698 aa8.92□□□□□ -0.98
GAPVD1-218ENST00000495588 SNAPC4Q5SXM2 1469 aa8.92□□□□□ -0.98
GAPVD1-218ENST00000495588 PRXQ9BXM0 1461 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms