RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 USP4Q13107 963 aa6.91□□□□□ -1.3
GTF3A-208ENST00000493903 ZNF211Q13398 564 aaPredicted RBP6.91□□□□□ -1.3
GTF3A-208ENST00000493903 ARID5BQ14865 1188 aa6.91□□□□□ -1.3
GTF3A-208ENST00000493903 ERFEQ4G0M1 354 aa6.91□□□□□ -1.3
GTF3A-208ENST00000493903 OXLD1Q5BKU9 147 aa6.91□□□□□ -1.3
GTF3A-208ENST00000493903 TPCN2Q8NHX9 752 aa6.91□□□□□ -1.3
GTF3A-208ENST00000493903 DRC1Q96MC2 740 aa6.91□□□□□ -1.3
GTF3A-208ENST00000493903 PCDHGA11Q9Y5H2 935 aa6.91□□□□□ -1.3
GTF3A-208ENST00000493903 LCE2BO14633 110 aa6.9□□□□□ -1.3
GTF3A-208ENST00000493903 GTF3C2Q8WUA4 911 aaPredicted RBP6.9□□□□□ -1.3
GTF3A-208ENST00000493903 SREK1Q8WXA9 508 aaKnown RBP6.9□□□□□ -1.3
GTF3A-208ENST00000493903 COL26A1Q96A83 441 aa6.9□□□□□ -1.3
GTF3A-208ENST00000493903 SFI1A8K8P3 1242 aa6.89□□□□□ -1.31
GTF3A-208ENST00000493903 WEE1P30291 646 aa6.89□□□□□ -1.31
GTF3A-208ENST00000493903 ZC3H6P61129 1189 aaKnown RBP6.89□□□□□ -1.31
GTF3A-208ENST00000493903 ECM1Q16610 540 aa6.89□□□□□ -1.31
GTF3A-208ENST00000493903 TRMT44Q8IYL2 757 aaKnown RBP6.89□□□□□ -1.31
GTF3A-208ENST00000493903 SEPT12Q8IYM1 358 aa6.89□□□□□ -1.31
GTF3A-208ENST00000493903 RGL4Q8IZJ4 473 aa6.89□□□□□ -1.31
GTF3A-208ENST00000493903 MPNDQ8N594 471 aa6.89□□□□□ -1.31
GTF3A-208ENST00000493903 HPS1Q92902 700 aa6.89□□□□□ -1.31
GTF3A-208ENST00000493903 CDK15Q96Q40 435 aa6.89□□□□□ -1.31
GTF3A-208ENST00000493903 WASF2Q9Y6W5 498 aa6.89□□□□□ -1.31
GTF3A-208ENST00000493903 GIGYF1O75420 1035 aaPredicted RBP6.88□□□□□ -1.31
GTF3A-208ENST00000493903 ADH1CP00326 375 aa6.88□□□□□ -1.31
GTF3A-208ENST00000493903 ARHGAP4P98171 946 aa6.88□□□□□ -1.31
GTF3A-208ENST00000493903 MYT1Q01538 1121 aa6.88□□□□□ -1.31
GTF3A-208ENST00000493903 PSME1Q06323 249 aa6.88□□□□□ -1.31
GTF3A-208ENST00000493903 SLC10A4Q96EP9 437 aa6.88□□□□□ -1.31
GTF3A-208ENST00000493903 HINFPQ9BQA5 517 aa6.88□□□□□ -1.31
GTF3A-208ENST00000493903 ANO2Q9NQ90 1003 aa6.88□□□□□ -1.31
GTF3A-208ENST00000493903 DNMT3AQ9Y6K1 912 aaPredicted RBP6.88□□□□□ -1.31
GTF3A-208ENST00000493903 RECKO95980 971 aa6.87□□□□□ -1.31
GTF3A-208ENST00000493903 GRM5P41594 1212 aa6.87□□□□□ -1.31
GTF3A-208ENST00000493903 NNTQ13423 1086 aa6.87□□□□□ -1.31
GTF3A-208ENST00000493903 NBPF20Q3BBV1 942 aa6.87□□□□□ -1.31
GTF3A-208ENST00000493903 EAPPQ56P03 285 aaPredicted RBP6.87□□□□□ -1.31
GTF3A-208ENST00000493903 VASH1Q7L8A9 365 aaPredicted RBP6.87□□□□□ -1.31
GTF3A-208ENST00000493903 CDV3Q9UKY7 258 aaKnown RBP6.87□□□□□ -1.31
GTF3A-208ENST00000493903 ESPNB1AK53 854 aa6.86□□□□□ -1.31
GTF3A-208ENST00000493903 ST8SIA5O15466 376 aa6.86□□□□□ -1.31
GTF3A-208ENST00000493903 AVPP01185 164 aa6.86□□□□□ -1.31
GTF3A-208ENST00000493903 NPR3P17342 541 aa6.86□□□□□ -1.31
GTF3A-208ENST00000493903 FSHRP23945 695 aa6.86□□□□□ -1.31
GTF3A-208ENST00000493903 CANXP27824 592 aaKnown RBP6.86□□□□□ -1.31
GTF3A-208ENST00000493903 ITGAEP38570 1179 aa6.86□□□□□ -1.31
GTF3A-208ENST00000493903 FGD1P98174 961 aa6.86□□□□□ -1.31
GTF3A-208ENST00000493903 SEPT3Q9UH03 358 aa6.86□□□□□ -1.31
GTF3A-208ENST00000493903 MAP4K5Q9Y4K4 846 aa6.86□□□□□ -1.31
GTF3A-208ENST00000493903 FOXO3O43524 673 aa6.85□□□□□ -1.31
GTF3A-208ENST00000493903 FAM13AO94988 1023 aa6.85□□□□□ -1.31
GTF3A-208ENST00000493903 NR3C2P08235 984 aa6.85□□□□□ -1.31
GTF3A-208ENST00000493903 FKBP5Q13451 457 aaPredicted RBP6.85□□□□□ -1.31
GTF3A-208ENST00000493903 SF3A1Q15459 793 aaKnown RBP6.85□□□□□ -1.31
GTF3A-208ENST00000493903 HELQQ8TDG4 1101 aa6.85□□□□□ -1.31
GTF3A-208ENST00000493903 RBCK1Q9BYM8 510 aa6.85□□□□□ -1.31
GTF3A-208ENST00000493903 IGFBP4P22692 258 aa6.84□□□□□ -1.31
GTF3A-208ENST00000493903 NR5A1Q13285 461 aa6.84□□□□□ -1.31
GTF3A-208ENST00000493903 KCTD15Q96SI1 283 aaPredicted RBP6.84□□□□□ -1.31
GTF3A-208ENST00000493903 AAASQ9NRG9 546 aa6.84□□□□□ -1.31
GTF3A-208ENST00000493903 PCDHB11Q9Y5F2 797 aa6.84□□□□□ -1.31
GTF3A-208ENST00000493903 AXIN1O15169 862 aa6.83□□□□□ -1.32
GTF3A-208ENST00000493903 MYCP01106 439 aaPredicted RBP6.83□□□□□ -1.32
GTF3A-208ENST00000493903 TAGLNQ01995 201 aaKnown RBP6.83□□□□□ -1.32
GTF3A-208ENST00000493903 CTC1Q2NKJ3 1217 aa6.83□□□□□ -1.32
GTF3A-208ENST00000493903 FAM177A1Q8N128 213 aaPredicted RBP6.83□□□□□ -1.32
GTF3A-208ENST00000493903 TSEN2Q8NCE0 465 aaKnown RBP6.83□□□□□ -1.32
GTF3A-208ENST00000493903 UBXN4Q92575 508 aa6.83□□□□□ -1.32
GTF3A-208ENST00000493903 CITED4Q96RK1 184 aa6.83□□□□□ -1.32
GTF3A-208ENST00000493903 MKNK1Q9BUB5 465 aa6.83□□□□□ -1.32
GTF3A-208ENST00000493903 SCAMP3O14828 347 aaKnown RBP6.82□□□□□ -1.32
GTF3A-208ENST00000493903 WDR4P57081 412 aaKnown RBP6.82□□□□□ -1.32
GTF3A-208ENST00000493903 MRPL58Q14197 206 aaKnown RBP6.82□□□□□ -1.32
GTF3A-208ENST00000493903 TSNAXIP1Q2TAA8 658 aa6.82□□□□□ -1.32
GTF3A-208ENST00000493903 NAALADL2Q58DX5 795 aa6.82□□□□□ -1.32
GTF3A-208ENST00000493903 CRIPAKQ8N1N5 446 aa6.82□□□□□ -1.32
GTF3A-208ENST00000493903 GAS2L2Q8NHY3 880 aa6.82□□□□□ -1.32
GTF3A-208ENST00000493903 TRIM52Q96A61 297 aa6.82□□□□□ -1.32
GTF3A-208ENST00000493903 DACH1Q9UI36 760 aa6.82□□□□□ -1.32
GTF3A-208ENST00000493903 NDUFB5O43674 189 aa6.81□□□□□ -1.32
GTF3A-208ENST00000493903 SMCPP49901 116 aaPredicted RBP6.81□□□□□ -1.32
GTF3A-208ENST00000493903 RAB15P59190 212 aa6.81□□□□□ -1.32
GTF3A-208ENST00000493903 INTS6LQ5JSJ4 861 aaKnown RBP6.81□□□□□ -1.32
GTF3A-208ENST00000493903 KLF16Q9BXK1 252 aaPredicted RBP6.81□□□□□ -1.32
GTF3A-208ENST00000493903 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.81□□□□□ -1.32
GTF3A-208ENST00000493903 WASLO00401 505 aaPredicted RBP6.8□□□□□ -1.32
GTF3A-208ENST00000493903 CAPN5O15484 640 aaPredicted RBP6.8□□□□□ -1.32
GTF3A-208ENST00000493903 TREHO43280 583 aa6.8□□□□□ -1.32
GTF3A-208ENST00000493903 ZIC2O95409 532 aaPredicted RBP6.8□□□□□ -1.32
GTF3A-208ENST00000493903 TIMP2P16035 220 aa6.8□□□□□ -1.32
GTF3A-208ENST00000493903 FMR1Q06787 632 aaKnown RBP eCLIP6.8□□□□□ -1.32
GTF3A-208ENST00000493903 MTMR3Q13615 1198 aa6.8□□□□□ -1.32
GTF3A-208ENST00000493903 CCDC116Q8IYX3 515 aa6.8□□□□□ -1.32
GTF3A-208ENST00000493903 ITPKCQ96DU7 683 aa6.8□□□□□ -1.32
GTF3A-208ENST00000493903 BACH2Q9BYV9 841 aa6.8□□□□□ -1.32
GTF3A-208ENST00000493903 ZFAND3Q9H8U3 227 aa6.8□□□□□ -1.32
GTF3A-208ENST00000493903 ZNF358Q9NW07 568 aa6.8□□□□□ -1.32
GTF3A-208ENST00000493903 BACH1O14867 736 aa6.79□□□□□ -1.32
GTF3A-208ENST00000493903 P4HBP07237 508 aaKnown RBP6.79□□□□□ -1.32
GTF3A-208ENST00000493903 CDK11BP21127 795 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms