RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SUV39H2Q9H5I1 410 aa6.5□□□□□ -1.37
HMGB1P30-201ENST00000492455 GPAMQ9HCL2 828 aa6.5□□□□□ -1.37
HMGB1P30-201ENST00000492455 PCDHB9Q9Y5E1 797 aa6.5□□□□□ -1.37
HMGB1P30-201ENST00000492455 A0A1B0GTH6 734 aa6.49□□□□□ -1.37
HMGB1P30-201ENST00000492455 ERVK-9P63128 1117 aa6.49□□□□□ -1.37
HMGB1P30-201ENST00000492455 EFHC2Q5JST6 749 aa6.49□□□□□ -1.37
HMGB1P30-201ENST00000492455 LINC00114Q6XXX2 140 aa6.49□□□□□ -1.37
HMGB1P30-201ENST00000492455 C1orf229Q6ZS94 237 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P30-201ENST00000492455 SKIV2LQ15477 1246 aaKnown RBP6.48□□□□□ -1.37
HMGB1P30-201ENST00000492455 ARHGEF10LQ9HCE6 1279 aa6.48□□□□□ -1.37
HMGB1P30-201ENST00000492455 GGA1Q9UJY5 639 aa6.48□□□□□ -1.37
HMGB1P30-201ENST00000492455 ATXN7L1Q9ULK2 861 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P30-201ENST00000492455 GIGYF1O75420 1035 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P30-201ENST00000492455 DOC2BQ14184 412 aa6.47□□□□□ -1.37
HMGB1P30-201ENST00000492455 GNASQ5JWF2 1037 aa6.47□□□□□ -1.37
HMGB1P30-201ENST00000492455 KRTAP1-3Q8IUG1 177 aa6.47□□□□□ -1.37
HMGB1P30-201ENST00000492455 EPS8L1Q8TE68 723 aa6.47□□□□□ -1.37
HMGB1P30-201ENST00000492455 ZNF592Q92610 1267 aa6.47□□□□□ -1.37
HMGB1P30-201ENST00000492455 USP17L8P0C7I0 530 aa6.46□□□□□ -1.38
HMGB1P30-201ENST00000492455 CHRNA4P43681 627 aa6.46□□□□□ -1.38
HMGB1P30-201ENST00000492455 ZBBXA8MT70 800 aa6.45□□□□□ -1.38
HMGB1P30-201ENST00000492455 FGFR3P22607 806 aa6.45□□□□□ -1.38
HMGB1P30-201ENST00000492455 GATA4P43694 442 aa6.45□□□□□ -1.38
HMGB1P30-201ENST00000492455 PHKA2P46019 1235 aa6.45□□□□□ -1.38
HMGB1P30-201ENST00000492455 SH3D19Q5HYK7 790 aa6.45□□□□□ -1.38
HMGB1P30-201ENST00000492455 BTBD6Q96KE9 485 aa6.45□□□□□ -1.38
HMGB1P30-201ENST00000492455 EPXP11678 715 aa6.44□□□□□ -1.38
HMGB1P30-201ENST00000492455 MCCD1P59942 119 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P30-201ENST00000492455 TMEM214Q6NUQ4 689 aaKnown RBP6.44□□□□□ -1.38
HMGB1P30-201ENST00000492455 ABHD17AQ96GS6 310 aa6.44□□□□□ -1.38
HMGB1P30-201ENST00000492455 ZSCAN10Q96SZ4 725 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P30-201ENST00000492455 HMX1Q9NP08 348 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P30-201ENST00000492455 PCDHB11Q9Y5F2 797 aa6.44□□□□□ -1.38
HMGB1P30-201ENST00000492455 GNRH1P01148 92 aa6.43□□□□□ -1.38
HMGB1P30-201ENST00000492455 ARAFP10398 606 aa6.43□□□□□ -1.38
HMGB1P30-201ENST00000492455 DGKGP49619 791 aa6.43□□□□□ -1.38
HMGB1P30-201ENST00000492455 NBPF11Q86T75 865 aa6.43□□□□□ -1.38
HMGB1P30-201ENST00000492455 RNF135Q8IUD6 432 aa6.43□□□□□ -1.38
HMGB1P30-201ENST00000492455 CNKSR1Q969H4 720 aa6.43□□□□□ -1.38
HMGB1P30-201ENST00000492455 ESYT1Q9BSJ8 1104 aa6.43□□□□□ -1.38
HMGB1P30-201ENST00000492455 RUBCNLQ9H714 662 aa6.43□□□□□ -1.38
HMGB1P30-201ENST00000492455 THBS1P07996 1170 aa6.42□□□□□ -1.38
HMGB1P30-201ENST00000492455 HOXB4P17483 251 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P30-201ENST00000492455 CENPCQ03188 943 aa6.42□□□□□ -1.38
HMGB1P30-201ENST00000492455 NEUROD2Q15784 382 aa6.42□□□□□ -1.38
HMGB1P30-201ENST00000492455 FIGNL1Q6PIW4 674 aa6.42□□□□□ -1.38
HMGB1P30-201ENST00000492455 PROCA1Q8NCQ7 364 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P30-201ENST00000492455 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB1P30-201ENST00000492455 GPBP1L1Q9HC44 474 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P30-201ENST00000492455 RAB6BQ9NRW1 208 aa6.42□□□□□ -1.38
HMGB1P30-201ENST00000492455 ZNF330Q9Y3S2 320 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P30-201ENST00000492455 NEURL1BA8MQ27 555 aa6.41□□□□□ -1.38
HMGB1P30-201ENST00000492455 C2CD2LO14523 706 aa6.41□□□□□ -1.38
HMGB1P30-201ENST00000492455 MYCP01106 439 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P30-201ENST00000492455 SPATA31C1P0DKV0 1188 aa6.41□□□□□ -1.38
HMGB1P30-201ENST00000492455 ITGB7P26010 798 aa6.41□□□□□ -1.38
HMGB1P30-201ENST00000492455 SCTRP47872 440 aa6.41□□□□□ -1.38
HMGB1P30-201ENST00000492455 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
HMGB1P30-201ENST00000492455 CHSY3Q70JA7 882 aa6.41□□□□□ -1.38
HMGB1P30-201ENST00000492455 ZFP64Q9NPA5 681 aa6.41□□□□□ -1.38
HMGB1P30-201ENST00000492455 SPDYE3A6NKU9 549 aa6.4□□□□□ -1.38
HMGB1P30-201ENST00000492455 BTBD11A6QL63 1104 aa6.4□□□□□ -1.38
HMGB1P30-201ENST00000492455 TRAK2O60296 914 aa6.4□□□□□ -1.38
HMGB1P30-201ENST00000492455 ADH6P28332 368 aa6.4□□□□□ -1.38
HMGB1P30-201ENST00000492455 MSX1P28360 303 aa6.4□□□□□ -1.38
HMGB1P30-201ENST00000492455 CTBSQ01459 385 aa6.4□□□□□ -1.38
HMGB1P30-201ENST00000492455 OSBPL3Q9H4L5 887 aa6.4□□□□□ -1.38
HMGB1P30-201ENST00000492455 APBA3O96018 575 aa6.39□□□□□ -1.39
HMGB1P30-201ENST00000492455 FBXO45P0C2W1 286 aa6.39□□□□□ -1.39
HMGB1P30-201ENST00000492455 UBAP2LQ14157 1087 aaKnown RBP6.39□□□□□ -1.39
HMGB1P30-201ENST00000492455 ESCO1Q5FWF5 840 aa6.39□□□□□ -1.39
HMGB1P30-201ENST00000492455 FBXO31Q5XUX0 539 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P30-201ENST00000492455 DDRGK1Q96HY6 314 aa6.39□□□□□ -1.39
HMGB1P30-201ENST00000492455 BNIP3LO60238 219 aa6.38□□□□□ -1.39
HMGB1P30-201ENST00000492455 IL2RAP01589 272 aa6.38□□□□□ -1.39
HMGB1P30-201ENST00000492455 PRRT3Q5FWE3 981 aa6.38□□□□□ -1.39
HMGB1P30-201ENST00000492455 ARTNQ5T4W7 220 aa6.38□□□□□ -1.39
HMGB1P30-201ENST00000492455 C4orf17Q53FE4 359 aa6.37□□□□□ -1.39
HMGB1P30-201ENST00000492455 PLVAPQ9BX97 442 aa6.37□□□□□ -1.39
HMGB1P30-201ENST00000492455 KDM4CQ9H3R0 1056 aa6.37□□□□□ -1.39
HMGB1P30-201ENST00000492455 NDFIP2Q9NV92 336 aa6.37□□□□□ -1.39
HMGB1P30-201ENST00000492455 PCDHGC4Q9Y5F7 938 aa6.37□□□□□ -1.39
HMGB1P30-201ENST00000492455 TMEM132AQ24JP5 1023 aa6.36□□□□□ -1.39
HMGB1P30-201ENST00000492455 RSPO4Q2I0M5 234 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P30-201ENST00000492455 TBC1D9Q6ZT07 1266 aa6.36□□□□□ -1.39
HMGB1P30-201ENST00000492455 RHBDD1Q8TEB9 315 aa6.36□□□□□ -1.39
HMGB1P30-201ENST00000492455 CRISPLD1Q9H336 500 aa6.36□□□□□ -1.39
HMGB1P30-201ENST00000492455 AVENQ9NQS1 362 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P30-201ENST00000492455 RFC5P40937 340 aa6.35□□□□□ -1.39
HMGB1P30-201ENST00000492455 XAGE2Q96GT9 111 aa6.35□□□□□ -1.39
HMGB1P30-201ENST00000492455 TRIM34Q9BYJ4 488 aa6.35□□□□□ -1.39
HMGB1P30-201ENST00000492455 ATXN7O15265 892 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P30-201ENST00000492455 NR1H3Q13133 447 aa6.34□□□□□ -1.39
HMGB1P30-201ENST00000492455 TMEM259Q4ZIN3 620 aa6.34□□□□□ -1.39
HMGB1P30-201ENST00000492455 NLRP8Q86W28 1048 aa6.34□□□□□ -1.39
HMGB1P30-201ENST00000492455 NACC1Q96RE7 527 aa6.34□□□□□ -1.39
HMGB1P30-201ENST00000492455 PRR12Q9ULL5 1215 aa6.34□□□□□ -1.39
HMGB1P30-201ENST00000492455 DYRK3O43781 588 aa6.33□□□□□ -1.4
HMGB1P30-201ENST00000492455 ALAS2P22557 587 aa6.33□□□□□ -1.4
HMGB1P30-201ENST00000492455 NKAPLQ5M9Q1 402 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms