RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 MAP2P11137 1827 aaKnown RBP19.54■□□□□ 0.72
ATG4B-222ENST00000491867 ASAP1Q9ULH1 1129 aa19.54■□□□□ 0.72
ATG4B-222ENST00000491867 PLEKHG2Q9H7P9 1386 aa19.54■□□□□ 0.72
ATG4B-222ENST00000491867 KDM2BQ8NHM5 1336 aa19.53■□□□□ 0.72
ATG4B-222ENST00000491867 ATP6V1AP38606 617 aa19.53■□□□□ 0.72
ATG4B-222ENST00000491867 TMF1P82094 1093 aa19.53■□□□□ 0.72
ATG4B-222ENST00000491867 NLGN1Q8N2Q7 840 aa19.53■□□□□ 0.72
ATG4B-222ENST00000491867 KCPQ6ZWJ8 1503 aa19.52■□□□□ 0.72
ATG4B-222ENST00000491867 NKX1-1Q15270 411 aaPredicted RBP19.52■□□□□ 0.72
ATG4B-222ENST00000491867 GGNBP2Q9H3C7 697 aa19.52■□□□□ 0.72
ATG4B-222ENST00000491867 RRAGCQ9HB90 399 aa19.52■□□□□ 0.72
ATG4B-222ENST00000491867 CCDC87Q9NVE4 849 aa19.52■□□□□ 0.72
ATG4B-222ENST00000491867 INSRP06213 1382 aa19.52■□□□□ 0.72
ATG4B-222ENST00000491867 TMOD3Q9NYL9 352 aa19.51■□□□□ 0.71
ATG4B-222ENST00000491867 FYB1O15117 783 aa19.5■□□□□ 0.71
ATG4B-222ENST00000491867 TRAPPC3LQ5T215 181 aa19.5■□□□□ 0.71
ATG4B-222ENST00000491867 RNF181Q9P0P0 153 aa19.5■□□□□ 0.71
ATG4B-222ENST00000491867 KCNA3P22001 575 aa19.49■□□□□ 0.71
ATG4B-222ENST00000491867 SMC1BQ8NDV3 1235 aa19.49■□□□□ 0.71
ATG4B-222ENST00000491867 RTCBQ9Y3I0 505 aaKnown RBP19.49■□□□□ 0.71
ATG4B-222ENST00000491867 HSPA1AP0DMV8 641 aaKnown RBP19.48■□□□□ 0.71
ATG4B-222ENST00000491867 HSPA1BP0DMV9 641 aaKnown RBP19.48■□□□□ 0.71
ATG4B-222ENST00000491867 SPG7Q9UQ90 795 aa19.48■□□□□ 0.71
ATG4B-222ENST00000491867 PARP3Q9Y6F1 533 aa19.48■□□□□ 0.71
ATG4B-222ENST00000491867 FLT4P35916 1363 aa19.47■□□□□ 0.71
ATG4B-222ENST00000491867 DCAF5Q96JK2 942 aa19.47■□□□□ 0.71
ATG4B-222ENST00000491867 ATG3Q9NT62 314 aa19.47■□□□□ 0.71
ATG4B-222ENST00000491867 PIM2Q9P1W9 311 aa19.47■□□□□ 0.71
ATG4B-222ENST00000491867 BRCA1P38398 1863 aaKnown RBP19.46■□□□□ 0.71
ATG4B-222ENST00000491867 GYS1P13807 737 aa19.46■□□□□ 0.71
ATG4B-222ENST00000491867 DALRD3Q5D0E6 543 aaKnown RBP19.46■□□□□ 0.71
ATG4B-222ENST00000491867 ARHGEF1Q92888 912 aaKnown RBP19.46■□□□□ 0.71
ATG4B-222ENST00000491867 PKD1L3Q7Z443 1732 aa19.45■□□□□ 0.7
ATG4B-222ENST00000491867 TESK2Q96S53 571 aa19.45■□□□□ 0.7
ATG4B-222ENST00000491867 ARFGEF1Q9Y6D6 1849 aa19.44■□□□□ 0.7
ATG4B-222ENST00000491867 RFC4P35249 363 aa19.44■□□□□ 0.7
ATG4B-222ENST00000491867 C4AP0C0L4 1744 aa19.44■□□□□ 0.7
ATG4B-222ENST00000491867 ADRA2BP18089 450 aa19.43■□□□□ 0.7
ATG4B-222ENST00000491867 KIF24Q5T7B8 1368 aa19.43■□□□□ 0.7
ATG4B-222ENST00000491867 SLC4A9Q96Q91 983 aa19.42■□□□□ 0.7
ATG4B-222ENST00000491867 RC3H1Q5TC82 1133 aaKnown RBP19.41■□□□□ 0.7
ATG4B-222ENST00000491867 RBM42Q9BTD8 480 aaKnown RBP19.41■□□□□ 0.7
ATG4B-222ENST00000491867 EMILIN1Q9Y6C2 1016 aa19.41■□□□□ 0.7
ATG4B-222ENST00000491867 KDRP35968 1356 aa19.41■□□□□ 0.7
ATG4B-222ENST00000491867 TNRC6CQ9HCJ0 1690 aaKnown RBP19.4■□□□□ 0.7
ATG4B-222ENST00000491867 ST20-MTHFSA0A0A6YYL1 179 aa19.4■□□□□ 0.7
ATG4B-222ENST00000491867 RPS6KA4O75676 772 aa19.4■□□□□ 0.7
ATG4B-222ENST00000491867 PHKG2P15735 406 aa19.4■□□□□ 0.7
ATG4B-222ENST00000491867 IFNL2Q8IZJ0 200 aa19.4■□□□□ 0.7
ATG4B-222ENST00000491867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.4■□□□□ 0.7
ATG4B-222ENST00000491867 NCAPD2Q15021 1401 aa19.4■□□□□ 0.7
ATG4B-222ENST00000491867 CHRNA5P30532 468 aa19.39■□□□□ 0.69
ATG4B-222ENST00000491867 PPM1GO15355 546 aaPredicted RBP19.38■□□□□ 0.69
ATG4B-222ENST00000491867 SBF1O95248 1867 aa19.38■□□□□ 0.69
ATG4B-222ENST00000491867 CNTNAP4Q9C0A0 1308 aa19.38■□□□□ 0.69
ATG4B-222ENST00000491867 VEGFAP15692 232 aaPredicted RBP19.37■□□□□ 0.69
ATG4B-222ENST00000491867 EYA1Q99502 592 aa19.37■□□□□ 0.69
ATG4B-222ENST00000491867 TONSLQ96HA7 1378 aa19.36■□□□□ 0.69
ATG4B-222ENST00000491867 RASSF7Q02833 373 aa19.36■□□□□ 0.69
ATG4B-222ENST00000491867 DDR1Q08345 913 aa19.36■□□□□ 0.69
ATG4B-222ENST00000491867 SRP68Q9UHB9 627 aaKnown RBP19.36■□□□□ 0.69
ATG4B-222ENST00000491867 ZC3H4Q9UPT8 1303 aaKnown RBP19.35■□□□□ 0.69
ATG4B-222ENST00000491867 FKBP8Q14318 412 aa19.35■□□□□ 0.69
ATG4B-222ENST00000491867 MYH14Q7Z406 1995 aaKnown RBP19.34■□□□□ 0.69
ATG4B-222ENST00000491867 GLTPD2A6NH11 291 aa19.34■□□□□ 0.69
ATG4B-222ENST00000491867 SLC24A1O60721 1099 aa19.34■□□□□ 0.69
ATG4B-222ENST00000491867 SLC34A2O95436 690 aa19.33■□□□□ 0.68
ATG4B-222ENST00000491867 ERVV-2B6SEH9 535 aa19.32■□□□□ 0.68
ATG4B-222ENST00000491867 WASHC2AQ641Q2 1341 aa19.31■□□□□ 0.68
ATG4B-222ENST00000491867 ZNF831Q5JPB2 1677 aa19.31■□□□□ 0.68
ATG4B-222ENST00000491867 LMNB1P20700 586 aa19.31■□□□□ 0.68
ATG4B-222ENST00000491867 KDM6AO15550 1401 aaPredicted RBP19.31■□□□□ 0.68
ATG4B-222ENST00000491867 COL5A3P25940 1745 aaPredicted RBP19.31■□□□□ 0.68
ATG4B-222ENST00000491867 KIF20BQ96Q89 1820 aa19.3■□□□□ 0.68
ATG4B-222ENST00000491867 USP42Q9H9J4 1324 aaKnown RBP19.3■□□□□ 0.68
ATG4B-222ENST00000491867 CRKLP46109 303 aaKnown RBP19.3■□□□□ 0.68
ATG4B-222ENST00000491867 POLRMTO00411 1230 aaKnown RBP19.29■□□□□ 0.68
ATG4B-222ENST00000491867 PTCD1O75127 700 aaKnown RBP19.29■□□□□ 0.68
ATG4B-222ENST00000491867 CARD14Q9BXL6 1004 aa19.28■□□□□ 0.68
ATG4B-222ENST00000491867 MKRN1Q9UHC7 482 aaKnown RBP19.28■□□□□ 0.68
ATG4B-222ENST00000491867 POTECB2RU33 542 aa19.27■□□□□ 0.68
ATG4B-222ENST00000491867 TM4SF1P30408 202 aa19.27■□□□□ 0.68
ATG4B-222ENST00000491867 FOXN1O15353 648 aa19.26■□□□□ 0.67
ATG4B-222ENST00000491867 CABP4P57796 275 aa19.26■□□□□ 0.67
ATG4B-222ENST00000491867 HSP90AB1P08238 724 aaKnown RBP19.25■□□□□ 0.67
ATG4B-222ENST00000491867 CREBZFQ9NS37 354 aa19.25■□□□□ 0.67
ATG4B-222ENST00000491867 EIF4A2Q14240 407 aaKnown RBP19.23■□□□□ 0.67
ATG4B-222ENST00000491867 TTLL6Q8N841 843 aa19.23■□□□□ 0.67
ATG4B-222ENST00000491867 PRDM10Q9NQV6 1147 aa19.23■□□□□ 0.67
ATG4B-222ENST00000491867 POLKQ9UBT6 870 aa19.23■□□□□ 0.67
ATG4B-222ENST00000491867 ANKRD26Q9UPS8 1709 aa19.22■□□□□ 0.67
ATG4B-222ENST00000491867 NFKBIEO00221 500 aa19.22■□□□□ 0.67
ATG4B-222ENST00000491867 ZPR1O75312 459 aa19.22■□□□□ 0.67
ATG4B-222ENST00000491867 USPL1Q5W0Q7 1092 aa19.22■□□□□ 0.67
ATG4B-222ENST00000491867 ZNF530Q6P9A1 599 aaPredicted RBP19.22■□□□□ 0.67
ATG4B-222ENST00000491867 INTS5Q6P9B9 1019 aaKnown RBP19.22■□□□□ 0.67
ATG4B-222ENST00000491867 DPY19L2Q6NUT2 758 aa19.21■□□□□ 0.67
ATG4B-222ENST00000491867 CCDC88AQ3V6T2 1871 aa19.2■□□□□ 0.66
ATG4B-222ENST00000491867 NFIXQ14938 502 aa19.2■□□□□ 0.66
ATG4B-222ENST00000491867 PLEKHO1Q53GL0 409 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms