RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 ITGB4P16144 1822 aa15.66■□□□□ 0.1
CLCNKA-206ENST00000491433 KIF24Q5T7B8 1368 aa15.65■□□□□ 0.1
CLCNKA-206ENST00000491433 VEGFAP15692 232 aaPredicted RBP15.65■□□□□ 0.1
CLCNKA-206ENST00000491433 WBP1LQ9NX94 342 aa15.65■□□□□ 0.1
CLCNKA-206ENST00000491433 RNF181Q9P0P0 153 aa15.65■□□□□ 0.1
CLCNKA-206ENST00000491433 CNTNAP1P78357 1384 aa15.64■□□□□ 0.09
CLCNKA-206ENST00000491433 HSPA8P11142 646 aaKnown RBP15.64■□□□□ 0.09
CLCNKA-206ENST00000491433 INSRP06213 1382 aa15.63■□□□□ 0.09
CLCNKA-206ENST00000491433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-206ENST00000491433 FCHSD2O94868 740 aa15.63■□□□□ 0.09
CLCNKA-206ENST00000491433 PHF14O94880 888 aa15.63■□□□□ 0.09
CLCNKA-206ENST00000491433 TGFB2P61812 414 aa15.63■□□□□ 0.09
CLCNKA-206ENST00000491433 RRS1Q15050 365 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-206ENST00000491433 PRPF38BQ5VTL8 546 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-206ENST00000491433 USHBP1Q8N6Y0 703 aa15.63■□□□□ 0.09
CLCNKA-206ENST00000491433 TNRC18O15417 2968 aaPredicted RBP15.62■□□□□ 0.09
CLCNKA-206ENST00000491433 PKD1L3Q7Z443 1732 aa15.62■□□□□ 0.09
CLCNKA-206ENST00000491433 TOGARAM1Q9Y4F4 1720 aa15.62■□□□□ 0.09
CLCNKA-206ENST00000491433 FLT4P35916 1363 aa15.62■□□□□ 0.09
CLCNKA-206ENST00000491433 FBLN1P23142 703 aa15.61■□□□□ 0.09
CLCNKA-206ENST00000491433 SPG7Q9UQ90 795 aa15.6■□□□□ 0.09
CLCNKA-206ENST00000491433 KIF13BQ9NQT8 1826 aa15.59■□□□□ 0.09
CLCNKA-206ENST00000491433 LOC102724428A0A0B4J2F2 783 aa15.59■□□□□ 0.09
CLCNKA-206ENST00000491433 A0A0G2JLW4 131 aa15.59■□□□□ 0.09
CLCNKA-206ENST00000491433 FYB1O15117 783 aa15.59■□□□□ 0.09
CLCNKA-206ENST00000491433 CYP27B1O15528 508 aa15.59■□□□□ 0.09
CLCNKA-206ENST00000491433 SIK1P57059 783 aa15.59■□□□□ 0.09
CLCNKA-206ENST00000491433 NKX1-1Q15270 411 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-206ENST00000491433 MAP2P11137 1827 aaKnown RBP15.59■□□□□ 0.09
CLCNKA-206ENST00000491433 PIGBQ92521 554 aa15.58■□□□□ 0.08
CLCNKA-206ENST00000491433 ZC3H4Q9UPT8 1303 aaKnown RBP15.58■□□□□ 0.08
CLCNKA-206ENST00000491433 TONSLQ96HA7 1378 aa15.58■□□□□ 0.08
CLCNKA-206ENST00000491433 KIF20BQ96Q89 1820 aa15.57■□□□□ 0.08
CLCNKA-206ENST00000491433 GNPATO15228 680 aa15.57■□□□□ 0.08
CLCNKA-206ENST00000491433 VEGFBP49765 207 aa15.57■□□□□ 0.08
CLCNKA-206ENST00000491433 HSP90AB2PQ58FF8 381 aa15.57■□□□□ 0.08
CLCNKA-206ENST00000491433 NLGN1Q8N2Q7 840 aa15.57■□□□□ 0.08
CLCNKA-206ENST00000491433 TESK2Q96S53 571 aa15.57■□□□□ 0.08
CLCNKA-206ENST00000491433 GGNBP2Q9H3C7 697 aa15.57■□□□□ 0.08
CLCNKA-206ENST00000491433 TMOD3Q9NYL9 352 aa15.57■□□□□ 0.08
CLCNKA-206ENST00000491433 ST20-MTHFSA0A0A6YYL1 179 aa15.56■□□□□ 0.08
CLCNKA-206ENST00000491433 MMP10P09238 476 aa15.56■□□□□ 0.08
CLCNKA-206ENST00000491433 ATP6V1AP38606 617 aa15.56■□□□□ 0.08
CLCNKA-206ENST00000491433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.56■□□□□ 0.08
CLCNKA-206ENST00000491433 MAP2K1Q02750 393 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-206ENST00000491433 AMIGO3Q86WK7 504 aa15.55■□□□□ 0.08
CLCNKA-206ENST00000491433 LINC00116Q8NCU8 138 aa15.55■□□□□ 0.08
CLCNKA-206ENST00000491433 CCDC87Q9NVE4 849 aa15.55■□□□□ 0.08
CLCNKA-206ENST00000491433 N4BP2Q86UW6 1770 aaPredicted RBP15.54■□□□□ 0.08
CLCNKA-206ENST00000491433 GLTPD2A6NH11 291 aa15.54■□□□□ 0.08
CLCNKA-206ENST00000491433 ADRA2BP18089 450 aa15.54■□□□□ 0.08
CLCNKA-206ENST00000491433 TMF1P82094 1093 aa15.54■□□□□ 0.08
CLCNKA-206ENST00000491433 CDCA8Q53HL2 280 aa15.54■□□□□ 0.08
CLCNKA-206ENST00000491433 TRAPPC3LQ5T215 181 aa15.54■□□□□ 0.08
CLCNKA-206ENST00000491433 RTCBQ9Y3I0 505 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-206ENST00000491433 KIAA1551Q9HCM1 1747 aa15.53■□□□□ 0.08
CLCNKA-206ENST00000491433 NCAPD2Q15021 1401 aa15.52■□□□□ 0.08
CLCNKA-206ENST00000491433 DPEP1P16444 411 aa15.52■□□□□ 0.08
CLCNKA-206ENST00000491433 IFNL2Q8IZJ0 200 aa15.52■□□□□ 0.08
CLCNKA-206ENST00000491433 ARFGEF1Q9Y6D6 1849 aa15.52■□□□□ 0.07
CLCNKA-206ENST00000491433 ZNF831Q5JPB2 1677 aa15.51■□□□□ 0.07
CLCNKA-206ENST00000491433 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
CLCNKA-206ENST00000491433 SMIM5Q71RC9 77 aa15.51■□□□□ 0.07
CLCNKA-206ENST00000491433 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
CLCNKA-206ENST00000491433 PARP3Q9Y6F1 533 aa15.51■□□□□ 0.07
CLCNKA-206ENST00000491433 BRCA1P38398 1863 aaKnown RBP15.5■□□□□ 0.07
CLCNKA-206ENST00000491433 ITPK1Q13572 414 aa15.5■□□□□ 0.07
CLCNKA-206ENST00000491433 RC3H1Q5TC82 1133 aaKnown RBP15.5■□□□□ 0.07
CLCNKA-206ENST00000491433 GCC1Q96CN9 775 aa15.5■□□□□ 0.07
CLCNKA-206ENST00000491433 ASAP1Q9ULH1 1129 aa15.5■□□□□ 0.07
CLCNKA-206ENST00000491433 C4AP0C0L4 1744 aa15.49■□□□□ 0.07
CLCNKA-206ENST00000491433 RFC4P35249 363 aa15.49■□□□□ 0.07
CLCNKA-206ENST00000491433 PIM2Q9P1W9 311 aa15.49■□□□□ 0.07
CLCNKA-206ENST00000491433 PHKG2P15735 406 aa15.48■□□□□ 0.07
CLCNKA-206ENST00000491433 TRIM26Q12899 539 aaPredicted RBP15.48■□□□□ 0.07
CLCNKA-206ENST00000491433 DALRD3Q5D0E6 543 aaKnown RBP15.48■□□□□ 0.07
CLCNKA-206ENST00000491433 BEGAINQ9BUH8 593 aa15.48■□□□□ 0.07
CLCNKA-206ENST00000491433 ATG3Q9NT62 314 aa15.48■□□□□ 0.07
CLCNKA-206ENST00000491433 EMILIN1Q9Y6C2 1016 aa15.48■□□□□ 0.07
CLCNKA-206ENST00000491433 ANKRD26Q9UPS8 1709 aa15.48■□□□□ 0.07
CLCNKA-206ENST00000491433 WASHC2AQ641Q2 1341 aa15.47■□□□□ 0.07
CLCNKA-206ENST00000491433 PPM1GO15355 546 aaPredicted RBP15.47■□□□□ 0.07
CLCNKA-206ENST00000491433 HSP90AB1P08238 724 aaKnown RBP15.47■□□□□ 0.07
CLCNKA-206ENST00000491433 MCOLN1Q9GZU1 580 aa15.47■□□□□ 0.07
CLCNKA-206ENST00000491433 TMEM88BA6NKF7 163 aa15.46■□□□□ 0.07
CLCNKA-206ENST00000491433 ERVV-2B6SEH9 535 aa15.46■□□□□ 0.07
CLCNKA-206ENST00000491433 RPS6KA4O75676 772 aa15.46■□□□□ 0.07
CLCNKA-206ENST00000491433 ARHGEF1Q92888 912 aaKnown RBP15.46■□□□□ 0.07
CLCNKA-206ENST00000491433 KDRP35968 1356 aa15.46■□□□□ 0.07
CLCNKA-206ENST00000491433 CNTNAP4Q9C0A0 1308 aa15.45■□□□□ 0.06
CLCNKA-206ENST00000491433 GYS1P13807 737 aa15.45■□□□□ 0.06
CLCNKA-206ENST00000491433 EYA1Q99502 592 aa15.45■□□□□ 0.06
CLCNKA-206ENST00000491433 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-206ENST00000491433 COL5A3P25940 1745 aaPredicted RBP15.45■□□□□ 0.06
CLCNKA-206ENST00000491433 VIRMAQ69YN4 1812 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-206ENST00000491433 LMNB1P20700 586 aa15.43■□□□□ 0.06
CLCNKA-206ENST00000491433 KCNA3P22001 575 aa15.43■□□□□ 0.06
CLCNKA-206ENST00000491433 DPY19L2Q6NUT2 758 aa15.43■□□□□ 0.06
CLCNKA-206ENST00000491433 POTECB2RU33 542 aa15.42■□□□□ 0.06
CLCNKA-206ENST00000491433 KDM6AO15550 1401 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms