RNA–Protein interactions for RNA: ENST00000491362.1

USP30-207, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2

Gene USP30, Length 745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-207ENST00000491362 ITGB4P16144 1822 aa11.66□□□□□ -0.54
USP30-207ENST00000491362 TAF1LQ8IZX4 1826 aa11.66□□□□□ -0.54
USP30-207ENST00000491362 ERVV-2B6SEH9 535 aa11.66□□□□□ -0.54
USP30-207ENST00000491362 HSP90AB1P08238 724 aaKnown RBP11.66□□□□□ -0.54
USP30-207ENST00000491362 AMOTQ4VCS5 1084 aa11.66□□□□□ -0.54
USP30-207ENST00000491362 ZBTB12Q9Y330 459 aaPredicted RBP11.66□□□□□ -0.54
USP30-207ENST00000491362 LOC102724428A0A0B4J2F2 783 aa11.65□□□□□ -0.54
USP30-207ENST00000491362 SIK1P57059 783 aa11.65□□□□□ -0.54
USP30-207ENST00000491362 TMOD3Q9NYL9 352 aa11.65□□□□□ -0.54
USP30-207ENST00000491362 CD2APQ9Y5K6 639 aa11.65□□□□□ -0.54
USP30-207ENST00000491362 C4BP0C0L5 1744 aa11.65□□□□□ -0.54
USP30-207ENST00000491362 ZNF831Q5JPB2 1677 aa11.65□□□□□ -0.55
USP30-207ENST00000491362 SSFA2P28290 1259 aa11.64□□□□□ -0.55
USP30-207ENST00000491362 DCAF5Q96JK2 942 aa11.64□□□□□ -0.55
USP30-207ENST00000491362 POLR3GLQ9BT43 218 aa11.64□□□□□ -0.55
USP30-207ENST00000491362 KNSTRNQ9Y448 316 aa11.64□□□□□ -0.55
USP30-207ENST00000491362 KDRP35968 1356 aa11.64□□□□□ -0.55
USP30-207ENST00000491362 ABCB7O75027 752 aa11.63□□□□□ -0.55
USP30-207ENST00000491362 TNNT2P45379 298 aaPredicted RBP11.63□□□□□ -0.55
USP30-207ENST00000491362 PLEKHO1Q53GL0 409 aaPredicted RBP11.63□□□□□ -0.55
USP30-207ENST00000491362 MORC1Q86VD1 984 aa11.63□□□□□ -0.55
USP30-207ENST00000491362 AK7Q96M32 723 aa11.63□□□□□ -0.55
USP30-207ENST00000491362 ATG3Q9NT62 314 aa11.63□□□□□ -0.55
USP30-207ENST00000491362 PER1O15534 1290 aaPredicted RBP11.62□□□□□ -0.55
USP30-207ENST00000491362 GPR162Q16538 588 aa11.62□□□□□ -0.55
USP30-207ENST00000491362 ZNF784Q8NCA9 323 aaPredicted RBP11.62□□□□□ -0.55
USP30-207ENST00000491362 ASAP1Q9ULH1 1129 aa11.62□□□□□ -0.55
USP30-207ENST00000491362 CHD4Q14839 1912 aa11.61□□□□□ -0.55
USP30-207ENST00000491362 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.61□□□□□ -0.55
USP30-207ENST00000491362 GRIN3BO60391 1043 aa11.61□□□□□ -0.55
USP30-207ENST00000491362 IL13P35225 146 aa11.61□□□□□ -0.55
USP30-207ENST00000491362 RC3H1Q5TC82 1133 aaKnown RBP11.61□□□□□ -0.55
USP30-207ENST00000491362 LINC00116Q8NCU8 138 aa11.61□□□□□ -0.55
USP30-207ENST00000491362 NPC1L1Q9UHC9 1359 aa11.61□□□□□ -0.55
USP30-207ENST00000491362 UBR3Q6ZT12 1888 aa11.61□□□□□ -0.55
USP30-207ENST00000491362 KIF7Q2M1P5 1343 aa11.6□□□□□ -0.55
USP30-207ENST00000491362 ATP6V1AP38606 617 aa11.6□□□□□ -0.55
USP30-207ENST00000491362 ITPK1Q13572 414 aa11.6□□□□□ -0.55
USP30-207ENST00000491362 AMIGO3Q86WK7 504 aa11.6□□□□□ -0.55
USP30-207ENST00000491362 NLGN2Q8NFZ4 835 aa11.6□□□□□ -0.55
USP30-207ENST00000491362 KDM6AO15550 1401 aaPredicted RBP11.59□□□□□ -0.55
USP30-207ENST00000491362 MSL1Q68DK7 614 aa11.58□□□□□ -0.56
USP30-207ENST00000491362 ZNF530Q6P9A1 599 aaPredicted RBP11.58□□□□□ -0.56
USP30-207ENST00000491362 SLC4A9Q96Q91 983 aa11.58□□□□□ -0.56
USP30-207ENST00000491362 CNTNAP4Q9C0A0 1308 aa11.58□□□□□ -0.56
USP30-207ENST00000491362 CICQ96RK0 1608 aaPredicted RBP11.57□□□□□ -0.56
USP30-207ENST00000491362 YBX3P16989 372 aaKnown RBP eCLIP11.57□□□□□ -0.56
USP30-207ENST00000491362 MTHFSP49914 203 aa11.57□□□□□ -0.56
USP30-207ENST00000491362 CABP4P57796 275 aa11.57□□□□□ -0.56
USP30-207ENST00000491362 C1orf141Q5JVX7 400 aa11.57□□□□□ -0.56
USP30-207ENST00000491362 SULT6B1Q6IMI4 303 aa11.57□□□□□ -0.56
USP30-207ENST00000491362 AEBP1Q8IUX7 1158 aa11.57□□□□□ -0.56
USP30-207ENST00000491362 UTRNP46939 3433 aa11.56□□□□□ -0.56
USP30-207ENST00000491362 GNPATO15228 680 aa11.56□□□□□ -0.56
USP30-207ENST00000491362 RPS6KA4O75676 772 aa11.56□□□□□ -0.56
USP30-207ENST00000491362 AKAP4Q5JQC9 854 aa11.56□□□□□ -0.56
USP30-207ENST00000491362 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
USP30-207ENST00000491362 NLGN1Q8N2Q7 840 aa11.56□□□□□ -0.56
USP30-207ENST00000491362 RTCBQ9Y3I0 505 aaKnown RBP11.56□□□□□ -0.56
USP30-207ENST00000491362 PHF14O94880 888 aa11.55□□□□□ -0.56
USP30-207ENST00000491362 TRAPPC3LQ5T215 181 aa11.55□□□□□ -0.56
USP30-207ENST00000491362 IFNLR1Q8IU57 520 aaPredicted RBP11.55□□□□□ -0.56
USP30-207ENST00000491362 COL5A3P25940 1745 aaPredicted RBP11.55□□□□□ -0.56
USP30-207ENST00000491362 NFATC2IPQ8NCF5 419 aa11.54□□□□□ -0.56
USP30-207ENST00000491362 MRC1P22897 1456 aa11.53□□□□□ -0.56
USP30-207ENST00000491362 TGFB2P61812 414 aa11.53□□□□□ -0.56
USP30-207ENST00000491362 ARHGEF1Q92888 912 aaKnown RBP11.53□□□□□ -0.56
USP30-207ENST00000491362 RBM42Q9BTD8 480 aaKnown RBP11.53□□□□□ -0.56
USP30-207ENST00000491362 SLC52A2Q9HAB3 445 aa11.53□□□□□ -0.56
USP30-207ENST00000491362 ADAMTS7Q9UKP4 1686 aa11.52□□□□□ -0.56
USP30-207ENST00000491362 SCN11AQ9UI33 1791 aa11.52□□□□□ -0.57
USP30-207ENST00000491362 DIAPH1O60610 1272 aaKnown RBP11.52□□□□□ -0.57
USP30-207ENST00000491362 SMIM5Q71RC9 77 aa11.52□□□□□ -0.57
USP30-207ENST00000491362 PELP1Q8IZL8 1130 aaKnown RBP11.52□□□□□ -0.57
USP30-207ENST00000491362 KIF13BQ9NQT8 1826 aa11.51□□□□□ -0.57
USP30-207ENST00000491362 MMP10P09238 476 aa11.51□□□□□ -0.57
USP30-207ENST00000491362 GYS1P13807 737 aa11.51□□□□□ -0.57
USP30-207ENST00000491362 RFC4P35249 363 aa11.51□□□□□ -0.57
USP30-207ENST00000491362 C1QTNF8P60827 252 aa11.51□□□□□ -0.57
USP30-207ENST00000491362 VSIG10Q8N0Z9 540 aa11.51□□□□□ -0.57
USP30-207ENST00000491362 RNMTO43148 476 aaKnown RBP11.5□□□□□ -0.57
USP30-207ENST00000491362 CRKLP46109 303 aaKnown RBP11.5□□□□□ -0.57
USP30-207ENST00000491362 ADCY9O60503 1353 aa11.5□□□□□ -0.57
USP30-207ENST00000491362 C10orf71Q711Q0 1435 aa11.5□□□□□ -0.57
USP30-207ENST00000491362 COL3A1P02461 1466 aaPredicted RBP11.5□□□□□ -0.57
USP30-207ENST00000491362 PTCD1O75127 700 aaKnown RBP11.49□□□□□ -0.57
USP30-207ENST00000491362 MTHFSDQ2M296 383 aaKnown RBP11.49□□□□□ -0.57
USP30-207ENST00000491362 CC2D1BQ5T0F9 858 aaKnown RBP11.49□□□□□ -0.57
USP30-207ENST00000491362 INTS5Q6P9B9 1019 aaKnown RBP11.49□□□□□ -0.57
USP30-207ENST00000491362 LGR6Q9HBX8 967 aa11.49□□□□□ -0.57
USP30-207ENST00000491362 PXDNLA1KZ92 1463 aa11.49□□□□□ -0.57
USP30-207ENST00000491362 TJP1Q07157 1748 aa11.49□□□□□ -0.57
USP30-207ENST00000491362 CCDC87Q9NVE4 849 aa11.48□□□□□ -0.57
USP30-207ENST00000491362 USP42Q9H9J4 1324 aaKnown RBP11.48□□□□□ -0.57
USP30-207ENST00000491362 MYH14Q7Z406 1995 aaKnown RBP11.48□□□□□ -0.57
USP30-207ENST00000491362 C4AP0C0L4 1744 aa11.47□□□□□ -0.57
USP30-207ENST00000491362 KIAA1551Q9HCM1 1747 aa11.47□□□□□ -0.57
USP30-207ENST00000491362 GIGYF1O75420 1035 aaPredicted RBP11.47□□□□□ -0.57
USP30-207ENST00000491362 HMOX1P09601 288 aa11.47□□□□□ -0.57
USP30-207ENST00000491362 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms