RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 CARD14Q9BXL6 1004 aa21.38■■□□□ 1.01
SCAMP3-208ENST00000490999 NMRK2Q9NPI5 230 aa21.37■■□□□ 1.01
SCAMP3-208ENST00000490999 ATG3Q9NT62 314 aa21.37■■□□□ 1.01
SCAMP3-208ENST00000490999 SLC24A1O60721 1099 aa21.36■■□□□ 1.01
SCAMP3-208ENST00000490999 PHKG2P15735 406 aa21.36■■□□□ 1.01
SCAMP3-208ENST00000490999 APLP1P51693 650 aa21.36■■□□□ 1.01
SCAMP3-208ENST00000490999 EYA1Q99502 592 aa21.36■■□□□ 1.01
SCAMP3-208ENST00000490999 KIF13BQ9NQT8 1826 aa21.36■■□□□ 1.01
SCAMP3-208ENST00000490999 ARHGAP27Q6ZUM4 889 aa21.34■■□□□ 1.01
SCAMP3-208ENST00000490999 C4AP0C0L4 1744 aa21.33■■□□□ 1.01
SCAMP3-208ENST00000490999 DPEP1P16444 411 aa21.33■■□□□ 1.01
SCAMP3-208ENST00000490999 SLC4A9Q96Q91 983 aa21.33■■□□□ 1.01
SCAMP3-208ENST00000490999 TOMM70O94826 608 aa21.32■■□□□ 1
SCAMP3-208ENST00000490999 HTRA3P83110 453 aa21.32■■□□□ 1
SCAMP3-208ENST00000490999 IFNL2Q8IZJ0 200 aa21.32■■□□□ 1
SCAMP3-208ENST00000490999 RTCBQ9Y3I0 505 aaKnown RBP21.32■■□□□ 1
SCAMP3-208ENST00000490999 WASHC2AQ641Q2 1341 aa21.31■■□□□ 1
SCAMP3-208ENST00000490999 FCHSD2O94868 740 aa21.31■■□□□ 1
SCAMP3-208ENST00000490999 TRAPPC3LQ5T215 181 aa21.31■■□□□ 1
SCAMP3-208ENST00000490999 DNAJC5GQ8N7S2 189 aa21.31■■□□□ 1
SCAMP3-208ENST00000490999 RBM42Q9BTD8 480 aaKnown RBP21.31■■□□□ 1
SCAMP3-208ENST00000490999 TGFB2P61812 414 aa21.3■■□□□ 1
SCAMP3-208ENST00000490999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.3■■□□□ 1
SCAMP3-208ENST00000490999 COL5A3P25940 1745 aaPredicted RBP21.29■■□□□ 1
SCAMP3-208ENST00000490999 WDR90Q96KV7 1748 aa21.29■■□□□ 1
SCAMP3-208ENST00000490999 GYS1P13807 737 aa21.29■■□□□ 1
SCAMP3-208ENST00000490999 ARHGEF1Q92888 912 aaKnown RBP21.29■■□□□ 1
SCAMP3-208ENST00000490999 CCDC87Q9NVE4 849 aa21.29■■□□□ 1
SCAMP3-208ENST00000490999 TNNT2P45379 298 aaPredicted RBP21.28■■□□□ 1
SCAMP3-208ENST00000490999 EIF4A2Q14240 407 aaKnown RBP21.28■■□□□ 1
SCAMP3-208ENST00000490999 C9orf131Q5VYM1 1079 aa21.28■■□□□ 1
SCAMP3-208ENST00000490999 NLGN1Q8N2Q7 840 aa21.28■■□□□ 1
SCAMP3-208ENST00000490999 PCNTO95613 3336 aa21.28■■□□□ 1
SCAMP3-208ENST00000490999 CDCA8Q53HL2 280 aa21.27■■□□□ 1
SCAMP3-208ENST00000490999 POLKQ9UBT6 870 aa21.27■■□□□ 1
SCAMP3-208ENST00000490999 KCPQ6ZWJ8 1503 aa21.27■■□□□ 1
SCAMP3-208ENST00000490999 KDM6AO15550 1401 aaPredicted RBP21.27■■□□□ 1
SCAMP3-208ENST00000490999 BRCA1P38398 1863 aaKnown RBP21.26■□□□□ 0.99
SCAMP3-208ENST00000490999 PARP3Q9Y6F1 533 aa21.26■□□□□ 0.99
SCAMP3-208ENST00000490999 CNTNAP4Q9C0A0 1308 aa21.26■□□□□ 0.99
SCAMP3-208ENST00000490999 RFC4P35249 363 aa21.25■□□□□ 0.99
SCAMP3-208ENST00000490999 ADRA2BP18089 450 aa21.24■□□□□ 0.99
SCAMP3-208ENST00000490999 KCNA3P22001 575 aa21.24■□□□□ 0.99
SCAMP3-208ENST00000490999 SRP68Q9UHB9 627 aaKnown RBP21.24■□□□□ 0.99
SCAMP3-208ENST00000490999 ZNF831Q5JPB2 1677 aa21.24■□□□□ 0.99
SCAMP3-208ENST00000490999 PLEKHG2Q9H7P9 1386 aa21.23■□□□□ 0.99
SCAMP3-208ENST00000490999 RBM46Q8TBY0 533 aaKnown RBP21.23■□□□□ 0.99
SCAMP3-208ENST00000490999 RPS6KA4O75676 772 aa21.22■□□□□ 0.99
SCAMP3-208ENST00000490999 C16orf71Q8IYS4 520 aaPredicted RBP21.22■□□□□ 0.99
SCAMP3-208ENST00000490999 PTCD1O75127 700 aaKnown RBP21.21■□□□□ 0.99
SCAMP3-208ENST00000490999 DDR1Q08345 913 aa21.21■□□□□ 0.99
SCAMP3-208ENST00000490999 RNF181Q9P0P0 153 aa21.21■□□□□ 0.99
SCAMP3-208ENST00000490999 ERVV-2B6SEH9 535 aa21.2■□□□□ 0.98
SCAMP3-208ENST00000490999 CAPN15O75808 1086 aa21.2■□□□□ 0.98
SCAMP3-208ENST00000490999 CHRNA5P30532 468 aa21.2■□□□□ 0.98
SCAMP3-208ENST00000490999 FKBP8Q14318 412 aa21.2■□□□□ 0.98
SCAMP3-208ENST00000490999 COL13A1Q5TAT6 717 aaPredicted RBP21.2■□□□□ 0.98
SCAMP3-208ENST00000490999 RC3H1Q5TC82 1133 aaKnown RBP21.2■□□□□ 0.98
SCAMP3-208ENST00000490999 ZNF530Q6P9A1 599 aaPredicted RBP21.2■□□□□ 0.98
SCAMP3-208ENST00000490999 KLRG1Q96E93 195 aa21.2■□□□□ 0.98
SCAMP3-208ENST00000490999 DCAF5Q96JK2 942 aa21.2■□□□□ 0.98
SCAMP3-208ENST00000490999 POLR3GLQ9BT43 218 aa21.2■□□□□ 0.98
SCAMP3-208ENST00000490999 CABP4P57796 275 aa21.19■□□□□ 0.98
SCAMP3-208ENST00000490999 DALRD3Q5D0E6 543 aaKnown RBP21.19■□□□□ 0.98
SCAMP3-208ENST00000490999 ARFGEF1Q9Y6D6 1849 aa21.19■□□□□ 0.98
SCAMP3-208ENST00000490999 TJP1Q07157 1748 aa21.18■□□□□ 0.98
SCAMP3-208ENST00000490999 MYH14Q7Z406 1995 aaKnown RBP21.18■□□□□ 0.98
SCAMP3-208ENST00000490999 CRKLP46109 303 aaKnown RBP21.18■□□□□ 0.98
SCAMP3-208ENST00000490999 PIM2Q9P1W9 311 aa21.18■□□□□ 0.98
SCAMP3-208ENST00000490999 AEBP1Q8IUX7 1158 aa21.17■□□□□ 0.98
SCAMP3-208ENST00000490999 USP42Q9H9J4 1324 aaKnown RBP21.17■□□□□ 0.98
SCAMP3-208ENST00000490999 KDM2BQ8NHM5 1336 aa21.16■□□□□ 0.98
SCAMP3-208ENST00000490999 HSP90AB1P08238 724 aaKnown RBP21.16■□□□□ 0.98
SCAMP3-208ENST00000490999 RRAGCQ9HB90 399 aa21.16■□□□□ 0.98
SCAMP3-208ENST00000490999 RASSF7Q02833 373 aa21.15■□□□□ 0.98
SCAMP3-208ENST00000490999 TNRC6CQ9HCJ0 1690 aaKnown RBP21.15■□□□□ 0.98
SCAMP3-208ENST00000490999 FSTL1Q12841 308 aa21.14■□□□□ 0.97
SCAMP3-208ENST00000490999 PLEKHO1Q53GL0 409 aaPredicted RBP21.14■□□□□ 0.97
SCAMP3-208ENST00000490999 JMYQ8N9B5 988 aa21.13■□□□□ 0.97
SCAMP3-208ENST00000490999 ADAMTS7Q9UKP4 1686 aa21.12■□□□□ 0.97
SCAMP3-208ENST00000490999 POLRMTO00411 1230 aaKnown RBP21.12■□□□□ 0.97
SCAMP3-208ENST00000490999 MTHFSP49914 203 aa21.12■□□□□ 0.97
SCAMP3-208ENST00000490999 NFATC2IPQ8NCF5 419 aa21.11■□□□□ 0.97
SCAMP3-208ENST00000490999 C1orf141Q5JVX7 400 aa21.1■□□□□ 0.97
SCAMP3-208ENST00000490999 AMOTQ4VCS5 1084 aa21.09■□□□□ 0.97
SCAMP3-208ENST00000490999 INTS5Q6P9B9 1019 aaKnown RBP21.09■□□□□ 0.97
SCAMP3-208ENST00000490999 USPL1Q5W0Q7 1092 aa21.08■□□□□ 0.97
SCAMP3-208ENST00000490999 TNS4Q8IZW8 715 aa21.08■□□□□ 0.97
SCAMP3-208ENST00000490999 SMC1BQ8NDV3 1235 aa21.08■□□□□ 0.97
SCAMP3-208ENST00000490999 PRELPP51888 382 aa21.07■□□□□ 0.96
SCAMP3-208ENST00000490999 DNAJC10Q8IXB1 793 aa21.07■□□□□ 0.96
SCAMP3-208ENST00000490999 SOS1Q07889 1333 aaPredicted RBP21.05■□□□□ 0.96
SCAMP3-208ENST00000490999 TIAM2Q8IVF5 1701 aa21.05■□□□□ 0.96
SCAMP3-208ENST00000490999 TM4SF1P30408 202 aa21.05■□□□□ 0.96
SCAMP3-208ENST00000490999 SULT6B1Q6IMI4 303 aa21.05■□□□□ 0.96
SCAMP3-208ENST00000490999 CARMIL3Q8ND23 1372 aa21.05■□□□□ 0.96
SCAMP3-208ENST00000490999 ZPR1O75312 459 aa21.04■□□□□ 0.96
SCAMP3-208ENST00000490999 SBF1O95248 1867 aa21.04■□□□□ 0.96
SCAMP3-208ENST00000490999 COL15A1P39059 1388 aa21.03■□□□□ 0.96
SCAMP3-208ENST00000490999 NFIXQ14938 502 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms