RNA–Protein interactions for RNA: ENST00000490903.5

CKAP2-207, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CKAP2, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-207ENST00000490903 U2SURPO15042 1029 aaKnown RBP7.33□□□□□ -1.24
CKAP2-207ENST00000490903 ZNF784Q8NCA9 323 aaPredicted RBP7.33□□□□□ -1.24
CKAP2-207ENST00000490903 NFATC2IPQ8NCF5 419 aa7.33□□□□□ -1.24
CKAP2-207ENST00000490903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.33□□□□□ -1.248e-7■■■■□ 20
CKAP2-207ENST00000490903 NKX1-1Q15270 411 aaPredicted RBP7.33□□□□□ -1.24
CKAP2-207ENST00000490903 RGPD3A6NKT7 1758 aaPredicted RBP7.32□□□□□ -1.24
CKAP2-207ENST00000490903 HSP90AB1P08238 724 aaKnown RBP7.32□□□□□ -1.24
CKAP2-207ENST00000490903 RGPD4Q7Z3J3 1758 aa7.32□□□□□ -1.24
CKAP2-207ENST00000490903 CASZ1Q86V15 1759 aa7.32□□□□□ -1.24
CKAP2-207ENST00000490903 AMOTQ4VCS5 1084 aa7.32□□□□□ -1.24
CKAP2-207ENST00000490903 DCAF5Q96JK2 942 aa7.32□□□□□ -1.24
CKAP2-207ENST00000490903 RTCBQ9Y3I0 505 aaKnown RBP7.32□□□□□ -1.24
CKAP2-207ENST00000490903 IGSF1Q8N6C5 1336 aa7.31□□□□□ -1.24
CKAP2-207ENST00000490903 HMGB2P26583 209 aaKnown RBP7.31□□□□□ -1.24
CKAP2-207ENST00000490903 TRAPPC3LQ5T215 181 aa7.31□□□□□ -1.24
CKAP2-207ENST00000490903 ZNF526Q8TF50 670 aaPredicted RBP7.31□□□□□ -1.24
CKAP2-207ENST00000490903 ERVV-2B6SEH9 535 aa7.31□□□□□ -1.24
CKAP2-207ENST00000490903 RFC4P35249 363 aa7.31□□□□□ -1.24
CKAP2-207ENST00000490903 AMER1Q5JTC6 1135 aaPredicted RBP7.31□□□□□ -1.24
CKAP2-207ENST00000490903 DIAPH1O60610 1272 aaKnown RBP7.3□□□□□ -1.24
CKAP2-207ENST00000490903 MMP10P09238 476 aa7.3□□□□□ -1.24
CKAP2-207ENST00000490903 YBX3P16989 372 aaKnown RBP eCLIP7.3□□□□□ -1.243e-7■■□□□ 13.9
CKAP2-207ENST00000490903 IL13P35225 146 aa7.3□□□□□ -1.24
CKAP2-207ENST00000490903 SLC39A6Q13433 755 aa7.3□□□□□ -1.24
CKAP2-207ENST00000490903 LGR6Q9HBX8 967 aa7.3□□□□□ -1.24
CKAP2-207ENST00000490903 SLC4A9Q96Q91 983 aa7.3□□□□□ -1.24
CKAP2-207ENST00000490903 GRIN3BO60391 1043 aa7.29□□□□□ -1.24
CKAP2-207ENST00000490903 SSFA2P28290 1259 aa7.29□□□□□ -1.24
CKAP2-207ENST00000490903 ARHGEF1Q92888 912 aaKnown RBP7.29□□□□□ -1.24
CKAP2-207ENST00000490903 ZNF330Q9Y3S2 320 aaPredicted RBP7.29□□□□□ -1.24
CKAP2-207ENST00000490903 SHANK3Q9BYB0 1731 aa7.29□□□□□ -1.24
CKAP2-207ENST00000490903 CD2APQ9Y5K6 639 aa7.28□□□□□ -1.24
CKAP2-207ENST00000490903 PAPPAQ13219 1627 aa7.28□□□□□ -1.24
CKAP2-207ENST00000490903 SRP68Q9UHB9 627 aaKnown RBP7.28□□□□□ -1.24
CKAP2-207ENST00000490903 BCS1LQ9Y276 419 aa7.28□□□□□ -1.24
CKAP2-207ENST00000490903 SENP3-EIF4A1A0A087X0R7 540 aa7.28□□□□□ -1.24
CKAP2-207ENST00000490903 A0A0G2JLW4 131 aa7.28□□□□□ -1.24
CKAP2-207ENST00000490903 MTHFSDQ2M296 383 aaKnown RBP7.28□□□□□ -1.24
CKAP2-207ENST00000490903 DNAJC10Q8IXB1 793 aa7.28□□□□□ -1.24
CKAP2-207ENST00000490903 PER1O15534 1290 aaPredicted RBP7.27□□□□□ -1.25
CKAP2-207ENST00000490903 CRKLP46109 303 aaKnown RBP7.27□□□□□ -1.25
CKAP2-207ENST00000490903 AKAP4Q5JQC9 854 aa7.27□□□□□ -1.25
CKAP2-207ENST00000490903 NLGN1Q8N2Q7 840 aa7.27□□□□□ -1.25
CKAP2-207ENST00000490903 PARP3Q9Y6F1 533 aa7.27□□□□□ -1.25
CKAP2-207ENST00000490903 RPS6KA4O75676 772 aa7.27□□□□□ -1.25
CKAP2-207ENST00000490903 ITGB4P16144 1822 aa7.27□□□□□ -1.25
CKAP2-207ENST00000490903 RNMTO43148 476 aaKnown RBP7.26□□□□□ -1.25
CKAP2-207ENST00000490903 CANXP27824 592 aaKnown RBP7.26□□□□□ -1.25
CKAP2-207ENST00000490903 LY75O60449 1722 aa7.26□□□□□ -1.25
CKAP2-207ENST00000490903 GIGYF1O75420 1035 aaPredicted RBP7.26□□□□□ -1.25
CKAP2-207ENST00000490903 TEFQ10587 303 aa7.26□□□□□ -1.25
CKAP2-207ENST00000490903 MAP3K5Q99683 1374 aa7.26□□□□□ -1.25
CKAP2-207ENST00000490903 KDM6AO15550 1401 aaPredicted RBP7.26□□□□□ -1.25
CKAP2-207ENST00000490903 ZPR1O75312 459 aa7.26□□□□□ -1.25
CKAP2-207ENST00000490903 BICDL1Q6ZP65 573 aa7.26□□□□□ -1.25
CKAP2-207ENST00000490903 ARHGAP27Q6ZUM4 889 aa7.26□□□□□ -1.25
CKAP2-207ENST00000490903 TTC5Q8N0Z6 440 aa7.26□□□□□ -1.25
CKAP2-207ENST00000490903 CFAP53Q96M91 514 aa7.26□□□□□ -1.25
CKAP2-207ENST00000490903 SLC52A2Q9HAB3 445 aa7.26□□□□□ -1.25
CKAP2-207ENST00000490903 FCHSD2O94868 740 aa7.25□□□□□ -1.25
CKAP2-207ENST00000490903 U2AF1L5P0DN76 240 aaPredicted RBP7.25□□□□□ -1.25
CKAP2-207ENST00000490903 GYS1P13807 737 aa7.25□□□□□ -1.25
CKAP2-207ENST00000490903 U2AF1Q01081 240 aaKnown RBP eCLIP7.25□□□□□ -1.25
CKAP2-207ENST00000490903 NPM2Q86SE8 214 aaKnown RBP7.25□□□□□ -1.25
CKAP2-207ENST00000490903 CCDC87Q9NVE4 849 aa7.25□□□□□ -1.25
CKAP2-207ENST00000490903 TOGARAM1Q9Y4F4 1720 aa7.25□□□□□ -1.25
CKAP2-207ENST00000490903 NCAPD2Q15021 1401 aa7.25□□□□□ -1.25
CKAP2-207ENST00000490903 TUBGCP6Q96RT7 1819 aa7.25□□□□□ -1.25
CKAP2-207ENST00000490903 FKBP8Q14318 412 aa7.25□□□□□ -1.25
CKAP2-207ENST00000490903 GPBP1L1Q9HC44 474 aaPredicted RBP7.25□□□□□ -1.25
CKAP2-207ENST00000490903 C4BP0C0L5 1744 aa7.25□□□□□ -1.25
CKAP2-207ENST00000490903 C1QTNF8P60827 252 aa7.25□□□□□ -1.25
CKAP2-207ENST00000490903 RC3H1Q5TC82 1133 aaKnown RBP7.25□□□□□ -1.25
CKAP2-207ENST00000490903 USPL1Q5W0Q7 1092 aa7.25□□□□□ -1.25
CKAP2-207ENST00000490903 DPEP1P16444 411 aa7.24□□□□□ -1.25
CKAP2-207ENST00000490903 NUDCQ9Y266 331 aa7.24□□□□□ -1.25
CKAP2-207ENST00000490903 C5P01031 1676 aa7.24□□□□□ -1.25
CKAP2-207ENST00000490903 PRKAR2BP31323 418 aa7.24□□□□□ -1.25
CKAP2-207ENST00000490903 PKD1L3Q7Z443 1732 aa7.23□□□□□ -1.25
CKAP2-207ENST00000490903 NPHP1O15259 732 aa7.23□□□□□ -1.25
CKAP2-207ENST00000490903 GNAT3A8MTJ3 354 aa7.23□□□□□ -1.25
CKAP2-207ENST00000490903 INTS5Q6P9B9 1019 aaKnown RBP7.23□□□□□ -1.25
CKAP2-207ENST00000490903 CCDC24Q8N4L8 307 aa7.23□□□□□ -1.25
CKAP2-207ENST00000490903 PHACTR3Q96KR7 559 aa7.23□□□□□ -1.25
CKAP2-207ENST00000490903 ZBTB1Q9Y2K1 713 aa7.23□□□□□ -1.25
CKAP2-207ENST00000490903 CNTNAP4Q9C0A0 1308 aa7.23□□□□□ -1.25
CKAP2-207ENST00000490903 CHRNA5P30532 468 aa7.23□□□□□ -1.25
CKAP2-207ENST00000490903 GAS2L2Q8NHY3 880 aa7.23□□□□□ -1.25
CKAP2-207ENST00000490903 PIP4K2AP48426 406 aaPredicted RBP7.22□□□□□ -1.25
CKAP2-207ENST00000490903 IL17REQ8NFR9 667 aa7.22□□□□□ -1.25
CKAP2-207ENST00000490903 RTF1Q92541 710 aaKnown RBP7.22□□□□□ -1.25
CKAP2-207ENST00000490903 ZNF219Q9P2Y4 722 aaPredicted RBP7.22□□□□□ -1.25
CKAP2-207ENST00000490903 TBC1D2BQ9UPU7 963 aa7.22□□□□□ -1.25
CKAP2-207ENST00000490903 KDRP35968 1356 aa7.22□□□□□ -1.25
CKAP2-207ENST00000490903 STARD3NLO95772 234 aa7.22□□□□□ -1.25
CKAP2-207ENST00000490903 CYP19A1P11511 503 aaPredicted RBP7.22□□□□□ -1.25
CKAP2-207ENST00000490903 DCTN1Q14203 1278 aa7.22□□□□□ -1.25
CKAP2-207ENST00000490903 CHD4Q14839 1912 aa7.22□□□□□ -1.25
CKAP2-207ENST00000490903 TAF1LQ8IZX4 1826 aa7.22□□□□□ -1.25
CKAP2-207ENST00000490903 ANKRD26Q9UPS8 1709 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms