RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 REPIN1Q9BWE0 567 aaKnown RBP6.21□□□□□ -1.42
RTN1-207ENST00000490111 SNRKQ9NRH2 765 aa6.21□□□□□ -1.42
RTN1-207ENST00000490111 STK26Q9P289 416 aa6.21□□□□□ -1.42
RTN1-207ENST00000490111 COL24A1Q17RW2 1714 aa6.21□□□□□ -1.42
RTN1-207ENST00000490111 ARHGEF28Q8N1W1 1705 aaKnown RBP6.21□□□□□ -1.42
RTN1-207ENST00000490111 TRPM3Q9HCF6 1732 aaPredicted RBP6.21□□□□□ -1.42
RTN1-207ENST00000490111 CRYBG1Q9Y4K1 1723 aa6.21□□□□□ -1.42
RTN1-207ENST00000490111 ATP7BP35670 1465 aa6.21□□□□□ -1.42
RTN1-207ENST00000490111 PLEKHH1Q9ULM0 1364 aa6.2□□□□□ -1.42
RTN1-207ENST00000490111 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.2□□□□□ -1.42
RTN1-207ENST00000490111 SPDYE16A6NNV3 312 aaPredicted RBP6.2□□□□□ -1.42
RTN1-207ENST00000490111 POM121CA8CG34 1229 aa6.2□□□□□ -1.42
RTN1-207ENST00000490111 GNPATO15228 680 aa6.2□□□□□ -1.42
RTN1-207ENST00000490111 PROCA1Q8NCQ7 364 aaPredicted RBP6.2□□□□□ -1.42
RTN1-207ENST00000490111 BANK1Q8NDB2 785 aa6.2□□□□□ -1.42
RTN1-207ENST00000490111 RBM46Q8TBY0 533 aaKnown RBP6.2□□□□□ -1.42
RTN1-207ENST00000490111 GNEQ9Y223 722 aaKnown RBP6.2□□□□□ -1.42
RTN1-207ENST00000490111 TOPAZ1Q8N9V7 1692 aa6.2□□□□□ -1.42
RTN1-207ENST00000490111 CLTCL1P53675 1640 aa6.19□□□□□ -1.42
RTN1-207ENST00000490111 TCF3P15923 654 aa6.19□□□□□ -1.42
RTN1-207ENST00000490111 NCLP19338 710 aaKnown RBP6.19□□□□□ -1.42
RTN1-207ENST00000490111 ZC3H6P61129 1189 aaKnown RBP6.19□□□□□ -1.42
RTN1-207ENST00000490111 MLLT1Q03111 559 aaPredicted RBP6.19□□□□□ -1.42
RTN1-207ENST00000490111 FSTL1Q12841 308 aa6.19□□□□□ -1.42
RTN1-207ENST00000490111 DDB1Q16531 1140 aa6.19□□□□□ -1.42
RTN1-207ENST00000490111 ZNF592Q92610 1267 aa6.19□□□□□ -1.42
RTN1-207ENST00000490111 CREBZFQ9NS37 354 aa6.19□□□□□ -1.42
RTN1-207ENST00000490111 IFT172Q9UG01 1749 aa6.19□□□□□ -1.42
RTN1-207ENST00000490111 GPRASP1Q5JY77 1395 aa6.18□□□□□ -1.42
RTN1-207ENST00000490111 PAPPAQ13219 1627 aa6.18□□□□□ -1.42
RTN1-207ENST00000490111 BCL9O00512 1426 aa6.18□□□□□ -1.42
RTN1-207ENST00000490111 PAK3O75914 559 aaPredicted RBP6.18□□□□□ -1.42
RTN1-207ENST00000490111 FECHP22830 423 aa6.18□□□□□ -1.42
RTN1-207ENST00000490111 ZNF827Q17R98 1081 aa6.18□□□□□ -1.42
RTN1-207ENST00000490111 MARCH10Q8NA82 808 aaPredicted RBP6.18□□□□□ -1.42
RTN1-207ENST00000490111 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.18□□□□□ -1.42
RTN1-207ENST00000490111 TULP4Q9NRJ4 1543 aa6.18□□□□□ -1.42
RTN1-207ENST00000490111 ZC3H4Q9UPT8 1303 aaKnown RBP6.18□□□□□ -1.42
RTN1-207ENST00000490111 NUP155O75694 1391 aa6.18□□□□□ -1.42
RTN1-207ENST00000490111 ABCC11Q96J66 1382 aa6.18□□□□□ -1.42
RTN1-207ENST00000490111 DPYSL4O14531 572 aa6.17□□□□□ -1.42
RTN1-207ENST00000490111 CFAP70Q5T0N1 1121 aa6.17□□□□□ -1.42
RTN1-207ENST00000490111 C16orf71Q8IYS4 520 aaPredicted RBP6.17□□□□□ -1.42
RTN1-207ENST00000490111 TMUB1Q9BVT8 246 aa6.17□□□□□ -1.42
RTN1-207ENST00000490111 VRTNQ9H8Y1 702 aa6.17□□□□□ -1.42
RTN1-207ENST00000490111 NMRK2Q9NPI5 230 aa6.17□□□□□ -1.42
RTN1-207ENST00000490111 BCCIPQ9P287 314 aaKnown RBP eCLIP6.17□□□□□ -1.42
RTN1-207ENST00000490111 KIF1BO60333 1816 aa6.17□□□□□ -1.42
RTN1-207ENST00000490111 RPGRIP1LQ68CZ1 1315 aa6.17□□□□□ -1.42
RTN1-207ENST00000490111 LRRC37A3O60309 1634 aa6.17□□□□□ -1.42
RTN1-207ENST00000490111 TMEM88BA6NKF7 163 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 SOX12O15370 315 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 PSEN1P49768 467 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 HIC1Q14526 733 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 TSR1Q2NL82 804 aaKnown RBP6.16□□□□□ -1.42
RTN1-207ENST00000490111 DNAJC14Q6Y2X3 702 aaPredicted RBP6.16□□□□□ -1.42
RTN1-207ENST00000490111 EFCAB3Q8N7B9 438 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 AKT1S1Q96B36 256 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 SIRT1Q96EB6 747 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 PSMD1Q99460 953 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 GDPD2Q9HCC8 539 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 BRPF3Q9ULD4 1205 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 CD2APQ9Y5K6 639 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 PHRF1Q9P1Y6 1649 aaKnown RBP6.16□□□□□ -1.42
RTN1-207ENST00000490111 QSER1Q2KHR3 1735 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 KIAA1210Q9ULL0 1709 aa6.16□□□□□ -1.42
RTN1-207ENST00000490111 KDM4AO75164 1064 aa6.15□□□□□ -1.42
RTN1-207ENST00000490111 ZNF16P17020 682 aaPredicted RBP6.15□□□□□ -1.42
RTN1-207ENST00000490111 ERCC3P19447 782 aa6.15□□□□□ -1.42
RTN1-207ENST00000490111 RGS19P49795 217 aa6.15□□□□□ -1.42
RTN1-207ENST00000490111 TMEM132EQ6IEE7 984 aa6.15□□□□□ -1.42
RTN1-207ENST00000490111 TICAM2Q86XR7 235 aa6.15□□□□□ -1.42
RTN1-207ENST00000490111 WWC1Q8IX03 1113 aa6.15□□□□□ -1.42
RTN1-207ENST00000490111 MTMR14Q8NCE2 650 aa6.15□□□□□ -1.42
RTN1-207ENST00000490111 PRDM10Q9NQV6 1147 aa6.15□□□□□ -1.42
RTN1-207ENST00000490111 PCDHB8Q9UN66 801 aa6.15□□□□□ -1.42
RTN1-207ENST00000490111 PCDHB13Q9Y5F0 798 aa6.15□□□□□ -1.42
RTN1-207ENST00000490111 KNDC1Q76NI1 1749 aa6.15□□□□□ -1.42
RTN1-207ENST00000490111 USP19O94966 1318 aa6.15□□□□□ -1.43
RTN1-207ENST00000490111 PNPLA7Q6ZV29 1317 aa6.15□□□□□ -1.43
RTN1-207ENST00000490111 CRB1P82279 1406 aa6.15□□□□□ -1.43
RTN1-207ENST00000490111 ANKARQ7Z5J8 1434 aa6.15□□□□□ -1.43
RTN1-207ENST00000490111 LMO7Q8WWI1 1683 aa6.14□□□□□ -1.43
RTN1-207ENST00000490111 AKAP12Q02952 1782 aa6.14□□□□□ -1.43
RTN1-207ENST00000490111 RFC5P40937 340 aa6.14□□□□□ -1.43
RTN1-207ENST00000490111 UBXN4Q92575 508 aa6.14□□□□□ -1.43
RTN1-207ENST00000490111 ABHD8Q96I13 439 aa6.14□□□□□ -1.43
RTN1-207ENST00000490111 EMILIN3Q9NT22 766 aa6.14□□□□□ -1.43
RTN1-207ENST00000490111 LRRC4BQ9NT99 713 aa6.14□□□□□ -1.43
RTN1-207ENST00000490111 ANKRD30BQ9BXX2 1392 aa6.14□□□□□ -1.43
RTN1-207ENST00000490111 ANKRD62A6NC57 917 aa6.13□□□□□ -1.43
RTN1-207ENST00000490111 FCHSD2O94868 740 aa6.13□□□□□ -1.43
RTN1-207ENST00000490111 RFX1P22670 979 aa6.13□□□□□ -1.43
RTN1-207ENST00000490111 NUTM2GQ5VZR2 741 aa6.13□□□□□ -1.43
RTN1-207ENST00000490111 NGDNQ8NEJ9 315 aaKnown RBP6.13□□□□□ -1.43
RTN1-207ENST00000490111 HIRIP3Q9BW71 556 aaPredicted RBP6.13□□□□□ -1.43
RTN1-207ENST00000490111 TFCP2L1Q9NZI6 479 aa6.13□□□□□ -1.43
RTN1-207ENST00000490111 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.13□□□□□ -1.43
RTN1-207ENST00000490111 BRD4O60885 1362 aaPredicted RBP6.13□□□□□ -1.43
RTN1-207ENST00000490111 COL5A2P05997 1499 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms