RNA–Protein interactions for RNA: ENST00000489783.1

SHOC2-206, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

TSL 2

Gene SHOC2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-206ENST00000489783 PKD1L3Q7Z443 1732 aa31.31■■■□□ 2.6
SHOC2-206ENST00000489783 JMYQ8N9B5 988 aa31.3■■■□□ 2.6
SHOC2-206ENST00000489783 SPG7Q9UQ90 795 aa31.3■■■□□ 2.6
SHOC2-206ENST00000489783 WDR90Q96KV7 1748 aa31.29■■■□□ 2.6
SHOC2-206ENST00000489783 FCHSD2O94868 740 aa31.29■■■□□ 2.6
SHOC2-206ENST00000489783 TMF1P82094 1093 aa31.29■■■□□ 2.6
SHOC2-206ENST00000489783 ATG3Q9NT62 314 aa31.29■■■□□ 2.6
SHOC2-206ENST00000489783 EMILIN1Q9Y6C2 1016 aa31.29■■■□□ 2.6
SHOC2-206ENST00000489783 KIF24Q5T7B8 1368 aa31.29■■■□□ 2.6
SHOC2-206ENST00000489783 CAPN15O75808 1086 aa31.28■■■□□ 2.6
SHOC2-206ENST00000489783 TRAPPC3LQ5T215 181 aa31.28■■■□□ 2.6
SHOC2-206ENST00000489783 C9orf131Q5VYM1 1079 aa31.28■■■□□ 2.6
SHOC2-206ENST00000489783 C10orf71Q711Q0 1435 aa31.28■■■□□ 2.6
SHOC2-206ENST00000489783 NLGN1Q8N2Q7 840 aa31.28■■■□□ 2.6
SHOC2-206ENST00000489783 NCAPD2Q15021 1401 aa31.26■■■□□ 2.6
SHOC2-206ENST00000489783 KCNA3P22001 575 aa31.26■■■□□ 2.59
SHOC2-206ENST00000489783 C16orf71Q8IYS4 520 aaPredicted RBP31.25■■■□□ 2.59
SHOC2-206ENST00000489783 RTCBQ9Y3I0 505 aaKnown RBP31.25■■■□□ 2.59
SHOC2-206ENST00000489783 SLC24A1O60721 1099 aa31.24■■■□□ 2.59
SHOC2-206ENST00000489783 ARHGEF1Q92888 912 aaKnown RBP31.24■■■□□ 2.59
SHOC2-206ENST00000489783 SLC4A9Q96Q91 983 aa31.24■■■□□ 2.59
SHOC2-206ENST00000489783 CCDC87Q9NVE4 849 aa31.24■■■□□ 2.59
SHOC2-206ENST00000489783 FSTL1Q12841 308 aa31.23■■■□□ 2.59
SHOC2-206ENST00000489783 GYS1P13807 737 aa31.22■■■□□ 2.59
SHOC2-206ENST00000489783 PHKG2P15735 406 aa31.22■■■□□ 2.59
SHOC2-206ENST00000489783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.22■■■□□ 2.591e-6■■■□□ 18.9
SHOC2-206ENST00000489783 EYA1Q99502 592 aa31.21■■■□□ 2.59
SHOC2-206ENST00000489783 PPM1GO15355 546 aaPredicted RBP31.2■■■□□ 2.59
SHOC2-206ENST00000489783 IFNL2Q8IZJ0 200 aa31.2■■■□□ 2.59
SHOC2-206ENST00000489783 KDRP35968 1356 aa31.18■■■□□ 2.58
SHOC2-206ENST00000489783 TONSLQ96HA7 1378 aa31.18■■■□□ 2.58
SHOC2-206ENST00000489783 TNS4Q8IZW8 715 aa31.18■■■□□ 2.58
SHOC2-206ENST00000489783 RRAGCQ9HB90 399 aa31.18■■■□□ 2.58
SHOC2-206ENST00000489783 PARP3Q9Y6F1 533 aa31.18■■■□□ 2.58
SHOC2-206ENST00000489783 KCPQ6ZWJ8 1503 aa31.18■■■□□ 2.58
SHOC2-206ENST00000489783 RC3H1Q5TC82 1133 aaKnown RBP31.17■■■□□ 2.58
SHOC2-206ENST00000489783 CARD14Q9BXL6 1004 aa31.17■■■□□ 2.58
SHOC2-206ENST00000489783 PLEKHG2Q9H7P9 1386 aa31.17■■■□□ 2.58
SHOC2-206ENST00000489783 BRCA1P38398 1863 aaKnown RBP31.16■■■□□ 2.58
SHOC2-206ENST00000489783 C4AP0C0L4 1744 aa31.16■■■□□ 2.58
SHOC2-206ENST00000489783 ADRA2BP18089 450 aa31.16■■■□□ 2.58
SHOC2-206ENST00000489783 RBM42Q9BTD8 480 aaKnown RBP31.16■■■□□ 2.58
SHOC2-206ENST00000489783 PCNTO95613 3336 aa31.16■■■□□ 2.58
SHOC2-206ENST00000489783 RFC4P35249 363 aa31.15■■■□□ 2.58
SHOC2-206ENST00000489783 DCAF5Q96JK2 942 aa31.15■■■□□ 2.58
SHOC2-206ENST00000489783 PIM2Q9P1W9 311 aa31.15■■■□□ 2.58
SHOC2-206ENST00000489783 KDM2BQ8NHM5 1336 aa31.15■■■□□ 2.58
SHOC2-206ENST00000489783 RPS6KA4O75676 772 aa31.14■■■□□ 2.58
SHOC2-206ENST00000489783 PRELPP51888 382 aa31.14■■■□□ 2.58
SHOC2-206ENST00000489783 RNF181Q9P0P0 153 aa31.14■■■□□ 2.58
SHOC2-206ENST00000489783 WASHC2AQ641Q2 1341 aa31.14■■■□□ 2.58
SHOC2-206ENST00000489783 KIF20BQ96Q89 1820 aa31.14■■■□□ 2.58
SHOC2-206ENST00000489783 DALRD3Q5D0E6 543 aaKnown RBP31.11■■■□□ 2.57
SHOC2-206ENST00000489783 CNTNAP4Q9C0A0 1308 aa31.11■■■□□ 2.57
SHOC2-206ENST00000489783 ARFGEF1Q9Y6D6 1849 aa31.1■■■□□ 2.57
SHOC2-206ENST00000489783 ERVV-2B6SEH9 535 aa31.07■■■□□ 2.56
SHOC2-206ENST00000489783 CHRNA5P30532 468 aa31.07■■■□□ 2.56
SHOC2-206ENST00000489783 SRP68Q9UHB9 627 aaKnown RBP31.07■■■□□ 2.56
SHOC2-206ENST00000489783 DDR1Q08345 913 aa31.06■■■□□ 2.56
SHOC2-206ENST00000489783 FKBP8Q14318 412 aa31.06■■■□□ 2.56
SHOC2-206ENST00000489783 SMC1BQ8NDV3 1235 aa31.06■■■□□ 2.56
SHOC2-206ENST00000489783 MYH14Q7Z406 1995 aaKnown RBP31.05■■■□□ 2.56
SHOC2-206ENST00000489783 POLKQ9UBT6 870 aa31.04■■■□□ 2.56
SHOC2-206ENST00000489783 ZNF831Q5JPB2 1677 aa31.03■■■□□ 2.56
SHOC2-206ENST00000489783 COL5A3P25940 1745 aaPredicted RBP31.03■■■□□ 2.56
SHOC2-206ENST00000489783 EIF4A2Q14240 407 aaKnown RBP31.01■■■□□ 2.55
SHOC2-206ENST00000489783 ANKRD26Q9UPS8 1709 aa31.01■■■□□ 2.55
SHOC2-206ENST00000489783 SBF1O95248 1867 aa31■■■□□ 2.55
SHOC2-206ENST00000489783 HSPA1AP0DMV8 641 aaKnown RBP30.99■■■□□ 2.55
SHOC2-206ENST00000489783 HSPA1BP0DMV9 641 aaKnown RBP30.99■■■□□ 2.55
SHOC2-206ENST00000489783 CRKLP46109 303 aaKnown RBP30.99■■■□□ 2.55
SHOC2-206ENST00000489783 PTCD1O75127 700 aaKnown RBP30.98■■■□□ 2.55
SHOC2-206ENST00000489783 CDCA8Q53HL2 280 aa30.98■■■□□ 2.55
SHOC2-206ENST00000489783 USP42Q9H9J4 1324 aaKnown RBP30.98■■■□□ 2.55
SHOC2-206ENST00000489783 TNRC6CQ9HCJ0 1690 aaKnown RBP30.97■■■□□ 2.55
SHOC2-206ENST00000489783 CABP4P57796 275 aa30.97■■■□□ 2.55
SHOC2-206ENST00000489783 RASSF7Q02833 373 aa30.97■■■□□ 2.55
SHOC2-206ENST00000489783 HSP90AB1P08238 724 aaKnown RBP30.96■■■□□ 2.55
SHOC2-206ENST00000489783 TM4SF1P30408 202 aa30.96■■■□□ 2.55
SHOC2-206ENST00000489783 POLRMTO00411 1230 aaKnown RBP30.95■■■□□ 2.55
SHOC2-206ENST00000489783 KDM6AO15550 1401 aaPredicted RBP30.95■■■□□ 2.54
SHOC2-206ENST00000489783 VEGFAP15692 232 aaPredicted RBP30.93■■■□□ 2.54
SHOC2-206ENST00000489783 GLTPD2A6NH11 291 aa30.92■■■□□ 2.54
SHOC2-206ENST00000489783 PLEKHO1Q53GL0 409 aaPredicted RBP30.91■■■□□ 2.54
SHOC2-206ENST00000489783 ZNF530Q6P9A1 599 aaPredicted RBP30.91■■■□□ 2.54
SHOC2-206ENST00000489783 TNNT2P45379 298 aaPredicted RBP30.9■■■□□ 2.54
SHOC2-206ENST00000489783 INTS5Q6P9B9 1019 aaKnown RBP30.9■■■□□ 2.54
SHOC2-206ENST00000489783 ZC3H4Q9UPT8 1303 aaKnown RBP30.9■■■□□ 2.54
SHOC2-206ENST00000489783 LMNB1P20700 586 aa30.89■■■□□ 2.54
SHOC2-206ENST00000489783 NFATC2IPQ8NCF5 419 aa30.89■■■□□ 2.54
SHOC2-206ENST00000489783 MTHFSP49914 203 aa30.87■■■□□ 2.53
SHOC2-206ENST00000489783 USPL1Q5W0Q7 1092 aa30.87■■■□□ 2.53
SHOC2-206ENST00000489783 POTECB2RU33 542 aa30.85■■■□□ 2.53
SHOC2-206ENST00000489783 AMOTQ4VCS5 1084 aa30.83■■■□□ 2.53
SHOC2-206ENST00000489783 ADAMTS7Q9UKP4 1686 aa30.83■■■□□ 2.53
SHOC2-206ENST00000489783 ZPR1O75312 459 aa30.82■■■□□ 2.52
SHOC2-206ENST00000489783 TJP1Q07157 1748 aa30.81■■■□□ 2.52
SHOC2-206ENST00000489783 NFIXQ14938 502 aa30.81■■■□□ 2.52
SHOC2-206ENST00000489783 AEBP1Q8IUX7 1158 aa30.8■■■□□ 2.52
SHOC2-206ENST00000489783 DNAJC10Q8IXB1 793 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms