RNA–Protein interactions for RNA: ENST00000489548.1

PHACTR1-210, Transcript of phosphatase and actin regulator 1, humanhuman

TSL 5

Gene PHACTR1, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1-210ENST00000489548 C4BP0C0L5 1744 aa12.58□□□□□ -0.4
PHACTR1-210ENST00000489548 SSFA2P28290 1259 aa12.58□□□□□ -0.4
PHACTR1-210ENST00000489548 FAM9BQ8IZU0 186 aa12.58□□□□□ -0.4
PHACTR1-210ENST00000489548 FLT4P35916 1363 aa12.57□□□□□ -0.4
PHACTR1-210ENST00000489548 LOC102724428A0A0B4J2F2 783 aa12.57□□□□□ -0.4
PHACTR1-210ENST00000489548 SIK1P57059 783 aa12.57□□□□□ -0.4
PHACTR1-210ENST00000489548 NKX1-1Q15270 411 aaPredicted RBP12.57□□□□□ -0.4
PHACTR1-210ENST00000489548 KIF24Q5T7B8 1368 aa12.56□□□□□ -0.4
PHACTR1-210ENST00000489548 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
PHACTR1-210ENST00000489548 LINC00116Q8NCU8 138 aa12.56□□□□□ -0.4
PHACTR1-210ENST00000489548 PANK3Q9H999 370 aa12.56□□□□□ -0.4
PHACTR1-210ENST00000489548 TOGARAM1Q9Y4F4 1720 aa12.55□□□□□ -0.4
PHACTR1-210ENST00000489548 CCDC184Q52MB2 194 aa12.55□□□□□ -0.4
PHACTR1-210ENST00000489548 SPG7Q9UQ90 795 aa12.55□□□□□ -0.4
PHACTR1-210ENST00000489548 KNSTRNQ9Y448 316 aa12.55□□□□□ -0.4
PHACTR1-210ENST00000489548 ITGB4P16144 1822 aa12.55□□□□□ -0.4
PHACTR1-210ENST00000489548 UBR3Q6ZT12 1888 aa12.55□□□□□ -0.4
PHACTR1-210ENST00000489548 GNPATO15228 680 aa12.54□□□□□ -0.4
PHACTR1-210ENST00000489548 ITPK1Q13572 414 aa12.54□□□□□ -0.4
PHACTR1-210ENST00000489548 TMOD3Q9NYL9 352 aa12.54□□□□□ -0.4
PHACTR1-210ENST00000489548 ASAP1Q9ULH1 1129 aa12.54□□□□□ -0.4
PHACTR1-210ENST00000489548 EMILIN1Q9Y6C2 1016 aa12.54□□□□□ -0.4
PHACTR1-210ENST00000489548 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
PHACTR1-210ENST00000489548 MMP10P09238 476 aa12.53□□□□□ -0.4
PHACTR1-210ENST00000489548 ATP6V1AP38606 617 aa12.53□□□□□ -0.4
PHACTR1-210ENST00000489548 CARD14Q9BXL6 1004 aa12.53□□□□□ -0.4
PHACTR1-210ENST00000489548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.53□□□□□ -0.4
PHACTR1-210ENST00000489548 APLP1P51693 650 aa12.52□□□□□ -0.41
PHACTR1-210ENST00000489548 TGFB2P61812 414 aa12.52□□□□□ -0.41
PHACTR1-210ENST00000489548 DNAJC5GQ8N7S2 189 aa12.52□□□□□ -0.41
PHACTR1-210ENST00000489548 EYA1Q99502 592 aa12.52□□□□□ -0.41
PHACTR1-210ENST00000489548 MAP2P11137 1827 aaKnown RBP12.52□□□□□ -0.41
PHACTR1-210ENST00000489548 NCAPD2Q15021 1401 aa12.52□□□□□ -0.41
PHACTR1-210ENST00000489548 A0A0G2JLW4 131 aa12.51□□□□□ -0.41
PHACTR1-210ENST00000489548 TOMM70O94826 608 aa12.51□□□□□ -0.41
PHACTR1-210ENST00000489548 FKBP8Q14318 412 aa12.51□□□□□ -0.41
PHACTR1-210ENST00000489548 ATG3Q9NT62 314 aa12.51□□□□□ -0.41
PHACTR1-210ENST00000489548 BCS1LQ9Y276 419 aa12.51□□□□□ -0.41
PHACTR1-210ENST00000489548 PKD1L3Q7Z443 1732 aa12.51□□□□□ -0.41
PHACTR1-210ENST00000489548 PHKG2P15735 406 aa12.5□□□□□ -0.41
PHACTR1-210ENST00000489548 TRAPPC3LQ5T215 181 aa12.5□□□□□ -0.41
PHACTR1-210ENST00000489548 ARHGAP27Q6ZUM4 889 aa12.5□□□□□ -0.41
PHACTR1-210ENST00000489548 IFNL2Q8IZJ0 200 aa12.5□□□□□ -0.41
PHACTR1-210ENST00000489548 NLGN1Q8N2Q7 840 aa12.5□□□□□ -0.41
PHACTR1-210ENST00000489548 PXDNLA1KZ92 1463 aa12.5□□□□□ -0.41
PHACTR1-210ENST00000489548 CICQ96RK0 1608 aaPredicted RBP12.49□□□□□ -0.41
PHACTR1-210ENST00000489548 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
PHACTR1-210ENST00000489548 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
PHACTR1-210ENST00000489548 SLC4A9Q96Q91 983 aa12.48□□□□□ -0.41
PHACTR1-210ENST00000489548 NMRK2Q9NPI5 230 aa12.48□□□□□ -0.41
PHACTR1-210ENST00000489548 KIF20BQ96Q89 1820 aa12.48□□□□□ -0.41
PHACTR1-210ENST00000489548 FCHSD2O94868 740 aa12.47□□□□□ -0.41
PHACTR1-210ENST00000489548 DPEP1P16444 411 aa12.47□□□□□ -0.41
PHACTR1-210ENST00000489548 AMER1Q5JTC6 1135 aaPredicted RBP12.47□□□□□ -0.41
PHACTR1-210ENST00000489548 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
PHACTR1-210ENST00000489548 NGEFQ8N5V2 710 aa12.47□□□□□ -0.41
PHACTR1-210ENST00000489548 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
PHACTR1-210ENST00000489548 GYS1P13807 737 aa12.46□□□□□ -0.41
PHACTR1-210ENST00000489548 ADRA2BP18089 450 aa12.46□□□□□ -0.41
PHACTR1-210ENST00000489548 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
PHACTR1-210ENST00000489548 CCDC87Q9NVE4 849 aa12.46□□□□□ -0.41
PHACTR1-210ENST00000489548 NUDCQ9Y266 331 aa12.46□□□□□ -0.41
PHACTR1-210ENST00000489548 KIF13BQ9NQT8 1826 aa12.46□□□□□ -0.42
PHACTR1-210ENST00000489548 C10orf71Q711Q0 1435 aa12.45□□□□□ -0.42
PHACTR1-210ENST00000489548 KDRP35968 1356 aa12.45□□□□□ -0.42
PHACTR1-210ENST00000489548 ERVV-2B6SEH9 535 aa12.45□□□□□ -0.42
PHACTR1-210ENST00000489548 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
PHACTR1-210ENST00000489548 KCNA3P22001 575 aa12.45□□□□□ -0.42
PHACTR1-210ENST00000489548 RFC4P35249 363 aa12.45□□□□□ -0.42
PHACTR1-210ENST00000489548 PARP3Q9Y6F1 533 aa12.45□□□□□ -0.42
PHACTR1-210ENST00000489548 N4BP2Q86UW6 1770 aaPredicted RBP12.45□□□□□ -0.42
PHACTR1-210ENST00000489548 KIAA1551Q9HCM1 1747 aa12.45□□□□□ -0.42
PHACTR1-210ENST00000489548 EIF4A2Q14240 407 aaKnown RBP12.44□□□□□ -0.42
PHACTR1-210ENST00000489548 CC2D1BQ5T0F9 858 aaKnown RBP12.44□□□□□ -0.42
PHACTR1-210ENST00000489548 C9orf131Q5VYM1 1079 aa12.44□□□□□ -0.42
PHACTR1-210ENST00000489548 RBM46Q8TBY0 533 aaKnown RBP12.44□□□□□ -0.42
PHACTR1-210ENST00000489548 CNTNAP4Q9C0A0 1308 aa12.43□□□□□ -0.42
PHACTR1-210ENST00000489548 DCAF5Q96JK2 942 aa12.43□□□□□ -0.42
PHACTR1-210ENST00000489548 HSP90AB1P08238 724 aaKnown RBP12.42□□□□□ -0.42
PHACTR1-210ENST00000489548 PPP2R1AP30153 589 aa12.42□□□□□ -0.42
PHACTR1-210ENST00000489548 HTRA3P83110 453 aa12.42□□□□□ -0.42
PHACTR1-210ENST00000489548 C16orf71Q8IYS4 520 aaPredicted RBP12.42□□□□□ -0.42
PHACTR1-210ENST00000489548 PIM2Q9P1W9 311 aa12.42□□□□□ -0.42
PHACTR1-210ENST00000489548 ANKRD26Q9UPS8 1709 aa12.42□□□□□ -0.42
PHACTR1-210ENST00000489548 PLEKHG2Q9H7P9 1386 aa12.42□□□□□ -0.42
PHACTR1-210ENST00000489548 C4AP0C0L4 1744 aa12.41□□□□□ -0.42
PHACTR1-210ENST00000489548 TNNT2P45379 298 aaPredicted RBP12.41□□□□□ -0.42
PHACTR1-210ENST00000489548 CABP4P57796 275 aa12.41□□□□□ -0.42
PHACTR1-210ENST00000489548 FSTL1Q12841 308 aa12.41□□□□□ -0.42
PHACTR1-210ENST00000489548 PLEKHO1Q53GL0 409 aaPredicted RBP12.41□□□□□ -0.42
PHACTR1-210ENST00000489548 DALRD3Q5D0E6 543 aaKnown RBP12.41□□□□□ -0.42
PHACTR1-210ENST00000489548 KLRG1Q96E93 195 aa12.41□□□□□ -0.42
PHACTR1-210ENST00000489548 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
PHACTR1-210ENST00000489548 PTCD1O75127 700 aaKnown RBP12.4□□□□□ -0.42
PHACTR1-210ENST00000489548 CRKLP46109 303 aaKnown RBP12.4□□□□□ -0.42
PHACTR1-210ENST00000489548 CNGB1Q14028 1251 aaPredicted RBP12.4□□□□□ -0.42
PHACTR1-210ENST00000489548 WDR43Q15061 677 aaKnown RBP eCLIP12.4□□□□□ -0.42
PHACTR1-210ENST00000489548 JMYQ8N9B5 988 aa12.4□□□□□ -0.42
PHACTR1-210ENST00000489548 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
PHACTR1-210ENST00000489548 SRP68Q9UHB9 627 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms