RNA–Protein interactions for RNA: ENST00000489071.5

ERGIC3-218, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-218ENST00000489071 FLAD1Q8NFF5 587 aa11.56□□□□□ -0.56
ERGIC3-218ENST00000489071 SPG7Q9UQ90 795 aa11.56□□□□□ -0.56
ERGIC3-218ENST00000489071 TAF1LQ8IZX4 1826 aa11.56□□□□□ -0.56
ERGIC3-218ENST00000489071 PKD1L3Q7Z443 1732 aa11.55□□□□□ -0.56
ERGIC3-218ENST00000489071 ANKRD26Q9UPS8 1709 aa11.55□□□□□ -0.56
ERGIC3-218ENST00000489071 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
ERGIC3-218ENST00000489071 CYP27B1O15528 508 aa11.55□□□□□ -0.56
ERGIC3-218ENST00000489071 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
ERGIC3-218ENST00000489071 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
ERGIC3-218ENST00000489071 MPRIPQ6WCQ1 1025 aa11.55□□□□□ -0.56
ERGIC3-218ENST00000489071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.56
ERGIC3-218ENST00000489071 C5P01031 1676 aa11.55□□□□□ -0.56
ERGIC3-218ENST00000489071 PALLDQ8WX93 1383 aa11.54□□□□□ -0.56
ERGIC3-218ENST00000489071 NCAPD2Q15021 1401 aa11.54□□□□□ -0.56
ERGIC3-218ENST00000489071 NKX1-1Q15270 411 aaPredicted RBP11.54□□□□□ -0.56
ERGIC3-218ENST00000489071 COL23A1Q86Y22 540 aaPredicted RBP11.54□□□□□ -0.56
ERGIC3-218ENST00000489071 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
ERGIC3-218ENST00000489071 EYA1Q99502 592 aa11.53□□□□□ -0.56
ERGIC3-218ENST00000489071 POLKQ9UBT6 870 aa11.53□□□□□ -0.56
ERGIC3-218ENST00000489071 MYBBP1AQ9BQG0 1328 aaKnown RBP11.53□□□□□ -0.56
ERGIC3-218ENST00000489071 TOGARAM1Q9Y4F4 1720 aa11.52□□□□□ -0.57
ERGIC3-218ENST00000489071 IFNL2Q8IZJ0 200 aa11.51□□□□□ -0.57
ERGIC3-218ENST00000489071 PELP1Q8IZL8 1130 aaKnown RBP11.51□□□□□ -0.57
ERGIC3-218ENST00000489071 PIGBQ92521 554 aa11.51□□□□□ -0.57
ERGIC3-218ENST00000489071 AK7Q96M32 723 aa11.51□□□□□ -0.57
ERGIC3-218ENST00000489071 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
ERGIC3-218ENST00000489071 PLEKHG2Q9H7P9 1386 aa11.51□□□□□ -0.57
ERGIC3-218ENST00000489071 C4BP0C0L5 1744 aa11.5□□□□□ -0.57
ERGIC3-218ENST00000489071 GRIN3BO60391 1043 aa11.5□□□□□ -0.57
ERGIC3-218ENST00000489071 UBR3Q6ZT12 1888 aa11.49□□□□□ -0.57
ERGIC3-218ENST00000489071 LOC102724428A0A0B4J2F2 783 aa11.49□□□□□ -0.57
ERGIC3-218ENST00000489071 PHKG2P15735 406 aa11.49□□□□□ -0.57
ERGIC3-218ENST00000489071 TNNT2P45379 298 aaPredicted RBP11.49□□□□□ -0.57
ERGIC3-218ENST00000489071 SIK1P57059 783 aa11.49□□□□□ -0.57
ERGIC3-218ENST00000489071 EIF4A2Q14240 407 aaKnown RBP11.49□□□□□ -0.57
ERGIC3-218ENST00000489071 MSL1Q68DK7 614 aa11.49□□□□□ -0.57
ERGIC3-218ENST00000489071 NLGN2Q8NFZ4 835 aa11.49□□□□□ -0.57
ERGIC3-218ENST00000489071 CD2APQ9Y5K6 639 aa11.49□□□□□ -0.57
ERGIC3-218ENST00000489071 HSP90AB1P08238 724 aaKnown RBP11.48□□□□□ -0.57
ERGIC3-218ENST00000489071 SSFA2P28290 1259 aa11.47□□□□□ -0.57
ERGIC3-218ENST00000489071 SSUH2Q9Y2M2 353 aa11.47□□□□□ -0.57
ERGIC3-218ENST00000489071 IGSF1Q8N6C5 1336 aa11.46□□□□□ -0.57
ERGIC3-218ENST00000489071 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.46□□□□□ -0.57
ERGIC3-218ENST00000489071 ERVV-2B6SEH9 535 aa11.46□□□□□ -0.57
ERGIC3-218ENST00000489071 ATP6V1AP38606 617 aa11.46□□□□□ -0.57
ERGIC3-218ENST00000489071 PLEKHO1Q53GL0 409 aaPredicted RBP11.46□□□□□ -0.57
ERGIC3-218ENST00000489071 ASAP1Q9ULH1 1129 aa11.46□□□□□ -0.57
ERGIC3-218ENST00000489071 PHF14O94880 888 aa11.45□□□□□ -0.58
ERGIC3-218ENST00000489071 AMOTQ4VCS5 1084 aa11.45□□□□□ -0.58
ERGIC3-218ENST00000489071 CC2D1BQ5T0F9 858 aaKnown RBP11.45□□□□□ -0.58
ERGIC3-218ENST00000489071 MORC1Q86VD1 984 aa11.45□□□□□ -0.58
ERGIC3-218ENST00000489071 LINC00116Q8NCU8 138 aa11.45□□□□□ -0.58
ERGIC3-218ENST00000489071 ATG3Q9NT62 314 aa11.45□□□□□ -0.58
ERGIC3-218ENST00000489071 YBX3P16989 372 aaKnown RBP eCLIP11.44□□□□□ -0.581e-10■■□□□ 11.4
ERGIC3-218ENST00000489071 C1QTNF8P60827 252 aa11.44□□□□□ -0.58
ERGIC3-218ENST00000489071 IFNLR1Q8IU57 520 aaPredicted RBP11.44□□□□□ -0.58
ERGIC3-218ENST00000489071 DCAF5Q96JK2 942 aa11.44□□□□□ -0.58
ERGIC3-218ENST00000489071 MRS2Q9HD23 443 aa11.44□□□□□ -0.58
ERGIC3-218ENST00000489071 GNPATO15228 680 aa11.43□□□□□ -0.58
ERGIC3-218ENST00000489071 ITPK1Q13572 414 aa11.43□□□□□ -0.58
ERGIC3-218ENST00000489071 AMIGO3Q86WK7 504 aa11.43□□□□□ -0.58
ERGIC3-218ENST00000489071 GIGYF1O75420 1035 aaPredicted RBP11.42□□□□□ -0.58
ERGIC3-218ENST00000489071 PPP2R1AP30153 589 aa11.42□□□□□ -0.58
ERGIC3-218ENST00000489071 CABP4P57796 275 aa11.42□□□□□ -0.58
ERGIC3-218ENST00000489071 C1orf141Q5JVX7 400 aa11.42□□□□□ -0.58
ERGIC3-218ENST00000489071 ZNF530Q6P9A1 599 aaPredicted RBP11.42□□□□□ -0.58
ERGIC3-218ENST00000489071 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
ERGIC3-218ENST00000489071 RTCBQ9Y3I0 505 aaKnown RBP11.42□□□□□ -0.58
ERGIC3-218ENST00000489071 ZNF831Q5JPB2 1677 aa11.42□□□□□ -0.58
ERGIC3-218ENST00000489071 MTHFSP49914 203 aa11.41□□□□□ -0.58
ERGIC3-218ENST00000489071 TRAPPC3LQ5T215 181 aa11.41□□□□□ -0.58
ERGIC3-218ENST00000489071 RC3H1Q5TC82 1133 aaKnown RBP11.41□□□□□ -0.58
ERGIC3-218ENST00000489071 SMIM5Q71RC9 77 aa11.41□□□□□ -0.58
ERGIC3-218ENST00000489071 SULT6B1Q6IMI4 303 aa11.4□□□□□ -0.58
ERGIC3-218ENST00000489071 NLGN1Q8N2Q7 840 aa11.4□□□□□ -0.58
ERGIC3-218ENST00000489071 PNISRQ8TF01 805 aaKnown RBP11.4□□□□□ -0.58
ERGIC3-218ENST00000489071 KDRP35968 1356 aa11.4□□□□□ -0.59
ERGIC3-218ENST00000489071 UTRNP46939 3433 aa11.4□□□□□ -0.59
ERGIC3-218ENST00000489071 CNTNAP4Q9C0A0 1308 aa11.39□□□□□ -0.59
ERGIC3-218ENST00000489071 SENP3-EIF4A1A0A087X0R7 540 aa11.39□□□□□ -0.59
ERGIC3-218ENST00000489071 MYH14Q7Z406 1995 aaKnown RBP11.39□□□□□ -0.59
ERGIC3-218ENST00000489071 COL5A3P25940 1745 aaPredicted RBP11.38□□□□□ -0.59
ERGIC3-218ENST00000489071 KDM6AO15550 1401 aaPredicted RBP11.38□□□□□ -0.59
ERGIC3-218ENST00000489071 RPS6KA4O75676 772 aa11.38□□□□□ -0.59
ERGIC3-218ENST00000489071 MMP10P09238 476 aa11.38□□□□□ -0.59
ERGIC3-218ENST00000489071 IL13P35225 146 aa11.38□□□□□ -0.59
ERGIC3-218ENST00000489071 RFC4P35249 363 aa11.38□□□□□ -0.59
ERGIC3-218ENST00000489071 AEBP1Q8IUX7 1158 aa11.38□□□□□ -0.59
ERGIC3-218ENST00000489071 CFAP53Q96M91 514 aa11.38□□□□□ -0.59
ERGIC3-218ENST00000489071 SLC4A9Q96Q91 983 aa11.38□□□□□ -0.59
ERGIC3-218ENST00000489071 SCN11AQ9UI33 1791 aa11.38□□□□□ -0.59
ERGIC3-218ENST00000489071 KIF13BQ9NQT8 1826 aa11.37□□□□□ -0.59
ERGIC3-218ENST00000489071 CENPBP07199 599 aaPredicted RBP11.37□□□□□ -0.59
ERGIC3-218ENST00000489071 TGFB2P61812 414 aa11.37□□□□□ -0.59
ERGIC3-218ENST00000489071 NFATC2IPQ8NCF5 419 aa11.37□□□□□ -0.59
ERGIC3-218ENST00000489071 ARHGEF1Q92888 912 aaKnown RBP11.37□□□□□ -0.59
ERGIC3-218ENST00000489071 PTCD1O75127 700 aaKnown RBP11.36□□□□□ -0.59
ERGIC3-218ENST00000489071 AKAP4Q5JQC9 854 aa11.36□□□□□ -0.59
ERGIC3-218ENST00000489071 CCDC87Q9NVE4 849 aa11.36□□□□□ -0.59
ERGIC3-218ENST00000489071 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms