RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 DCAF5Q96JK2 942 aa14.03□□□□□ -0.16
COL21A1-211ENST00000488912 SPATA31A1Q5TZJ5 1347 aa14.03□□□□□ -0.16
COL21A1-211ENST00000488912 CRBNQ96SW2 442 aa14.03□□□□□ -0.16
COL21A1-211ENST00000488912 BCL9LQ86UU0 1499 aa14.03□□□□□ -0.16
COL21A1-211ENST00000488912 BTBD11A6QL63 1104 aa14.02□□□□□ -0.16
COL21A1-211ENST00000488912 TCERG1O14776 1098 aaKnown RBP14.02□□□□□ -0.16
COL21A1-211ENST00000488912 HSP90AB1P08238 724 aaKnown RBP14.02□□□□□ -0.16
COL21A1-211ENST00000488912 NGLY1Q96IV0 654 aa14.02□□□□□ -0.16
COL21A1-211ENST00000488912 DDX54Q8TDD1 881 aaKnown RBP14.02□□□□□ -0.17
COL21A1-211ENST00000488912 SLC52A2Q9HAB3 445 aa14.02□□□□□ -0.17
COL21A1-211ENST00000488912 TOGARAM1Q9Y4F4 1720 aa14.02□□□□□ -0.17
COL21A1-211ENST00000488912 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.01□□□□□ -0.17
COL21A1-211ENST00000488912 KCNQ3O43525 872 aa14.01□□□□□ -0.17
COL21A1-211ENST00000488912 TNNQ9UQP3 1299 aa14.01□□□□□ -0.17
COL21A1-211ENST00000488912 SPATA31A5Q5VU36 1347 aa14.01□□□□□ -0.17
COL21A1-211ENST00000488912 SPATA31A7Q8IWB4 1347 aa14.01□□□□□ -0.17
COL21A1-211ENST00000488912 UNC5CLQ8IV45 518 aa14.01□□□□□ -0.17
COL21A1-211ENST00000488912 PPP4R2Q9NY27 417 aa14.01□□□□□ -0.17
COL21A1-211ENST00000488912 KIF16BQ96L93 1317 aa14.01□□□□□ -0.17
COL21A1-211ENST00000488912 BRPF1P55201 1214 aaPredicted RBP14□□□□□ -0.17
COL21A1-211ENST00000488912 PDE3AQ14432 1141 aa14□□□□□ -0.17
COL21A1-211ENST00000488912 ZKSCAN2Q63HK3 967 aa14□□□□□ -0.17
COL21A1-211ENST00000488912 MRPL50Q8N5N7 158 aaKnown RBP14□□□□□ -0.17
COL21A1-211ENST00000488912 NFATC2IPQ8NCF5 419 aa14□□□□□ -0.17
COL21A1-211ENST00000488912 PANK1Q8TE04 598 aa14□□□□□ -0.17
COL21A1-211ENST00000488912 NOB1Q9ULX3 412 aaKnown RBP14□□□□□ -0.17
COL21A1-211ENST00000488912 EIF4A1P60842 406 aaKnown RBP13.99□□□□□ -0.17
COL21A1-211ENST00000488912 FNBP4Q8N3X1 1017 aaPredicted RBP13.99□□□□□ -0.17
COL21A1-211ENST00000488912 THRAP3Q9Y2W1 955 aaKnown RBP13.99□□□□□ -0.17
COL21A1-211ENST00000488912 CCDC9Q9Y3X0 531 aaKnown RBP13.99□□□□□ -0.17
COL21A1-211ENST00000488912 TNS2Q63HR2 1409 aa13.99□□□□□ -0.17
COL21A1-211ENST00000488912 RLBP1P12271 317 aa13.99□□□□□ -0.17
COL21A1-211ENST00000488912 NKX1-1Q15270 411 aaPredicted RBP13.99□□□□□ -0.17
COL21A1-211ENST00000488912 CACNA1FO60840 1977 aa13.98□□□□□ -0.17
COL21A1-211ENST00000488912 TRIM27P14373 513 aa13.98□□□□□ -0.17
COL21A1-211ENST00000488912 CLUAP1Q96AJ1 413 aa13.98□□□□□ -0.17
COL21A1-211ENST00000488912 ATF7IPQ6VMQ6 1270 aa13.98□□□□□ -0.17
COL21A1-211ENST00000488912 CABP4P57796 275 aa13.97□□□□□ -0.17
COL21A1-211ENST00000488912 MEX3CQ5U5Q3 659 aaKnown RBP13.97□□□□□ -0.17
COL21A1-211ENST00000488912 CDCA7Q9BWT1 371 aaPredicted RBP13.97□□□□□ -0.17
COL21A1-211ENST00000488912 ITGB4P16144 1822 aa13.97□□□□□ -0.17
COL21A1-211ENST00000488912 SOS1Q07889 1333 aaPredicted RBP13.97□□□□□ -0.17
COL21A1-211ENST00000488912 SLC39A6Q13433 755 aa13.97□□□□□ -0.17
COL21A1-211ENST00000488912 VPS72Q15906 364 aa13.97□□□□□ -0.17
COL21A1-211ENST00000488912 B4GALNT3Q6L9W6 998 aa13.97□□□□□ -0.17
COL21A1-211ENST00000488912 KAT6BQ8WYB5 2073 aa13.97□□□□□ -0.17
COL21A1-211ENST00000488912 C5P01031 1676 aa13.96□□□□□ -0.17
COL21A1-211ENST00000488912 ZNF790Q6PG37 636 aa13.96□□□□□ -0.17
COL21A1-211ENST00000488912 USP21Q9UK80 565 aa13.96□□□□□ -0.17
COL21A1-211ENST00000488912 COG6Q9Y2V7 657 aa13.96□□□□□ -0.17
COL21A1-211ENST00000488912 PAPPAQ13219 1627 aa13.96□□□□□ -0.17
COL21A1-211ENST00000488912 EXOC5O00471 708 aa13.96□□□□□ -0.18
COL21A1-211ENST00000488912 IPO8O15397 1037 aaKnown RBP13.96□□□□□ -0.18
COL21A1-211ENST00000488912 BARGINQ6ZT62 677 aa13.96□□□□□ -0.18
COL21A1-211ENST00000488912 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.18
COL21A1-211ENST00000488912 DZIP1LQ8IYY4 767 aaKnown RBP13.96□□□□□ -0.18
COL21A1-211ENST00000488912 HEG1Q9ULI3 1381 aa13.95□□□□□ -0.18
COL21A1-211ENST00000488912 ERVV-2B6SEH9 535 aa13.95□□□□□ -0.18
COL21A1-211ENST00000488912 NECTIN2Q92692 538 aa13.95□□□□□ -0.18
COL21A1-211ENST00000488912 UBR2Q8IWV8 1755 aa13.95□□□□□ -0.18
COL21A1-211ENST00000488912 DOT1LQ8TEK3 1739 aa13.94□□□□□ -0.18
COL21A1-211ENST00000488912 SLC4A2P04920 1241 aa13.94□□□□□ -0.18
COL21A1-211ENST00000488912 HOXB7P09629 217 aa13.94□□□□□ -0.18
COL21A1-211ENST00000488912 DDB1Q16531 1140 aa13.94□□□□□ -0.18
COL21A1-211ENST00000488912 HDGFL1Q5TGJ6 251 aa13.94□□□□□ -0.18
COL21A1-211ENST00000488912 CCDC30Q5VVM6 783 aa13.94□□□□□ -0.18
COL21A1-211ENST00000488912 ARHGAP45Q92619 1136 aa13.94□□□□□ -0.18
COL21A1-211ENST00000488912 GLI3P10071 1580 aa13.94□□□□□ -0.18
COL21A1-211ENST00000488912 AFF2P51816 1311 aa13.94□□□□□ -0.18
COL21A1-211ENST00000488912 MS4A1P11836 297 aa13.93□□□□□ -0.18
COL21A1-211ENST00000488912 GIGYF1O75420 1035 aaPredicted RBP13.93□□□□□ -0.18
COL21A1-211ENST00000488912 FAM98CQ17RN3 349 aaKnown RBP13.93□□□□□ -0.18
COL21A1-211ENST00000488912 CCDC136Q96JN2 1154 aa13.93□□□□□ -0.18
COL21A1-211ENST00000488912 STK31Q9BXU1 1019 aa13.93□□□□□ -0.18
COL21A1-211ENST00000488912 RGS12O14924 1447 aa13.93□□□□□ -0.18
COL21A1-211ENST00000488912 PRAMEF22A3QJZ6 481 aa13.92□□□□□ -0.18
COL21A1-211ENST00000488912 MVPQ14764 893 aaKnown RBP13.92□□□□□ -0.18
COL21A1-211ENST00000488912 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
COL21A1-211ENST00000488912 ZNF496Q96IT1 587 aaPredicted RBP13.92□□□□□ -0.18
COL21A1-211ENST00000488912 EIF2S2P20042 333 aaKnown RBP13.92□□□□□ -0.18
COL21A1-211ENST00000488912 TMEM57Q8N5G2 664 aa13.92□□□□□ -0.18
COL21A1-211ENST00000488912 THSD7AQ9UPZ6 1657 aa13.91□□□□□ -0.18
COL21A1-211ENST00000488912 G2E3Q7L622 706 aa13.91□□□□□ -0.18
COL21A1-211ENST00000488912 ABCC4O15439 1325 aa13.91□□□□□ -0.18
COL21A1-211ENST00000488912 LAMB4A4D0S4 1761 aa13.91□□□□□ -0.18
COL21A1-211ENST00000488912 ITPRIPQ8IWB1 547 aa13.91□□□□□ -0.18
COL21A1-211ENST00000488912 TMOD3Q9NYL9 352 aa13.91□□□□□ -0.18
COL21A1-211ENST00000488912 KCPQ6ZWJ8 1503 aa13.91□□□□□ -0.18
COL21A1-211ENST00000488912 PTPRCP08575 1304 aa13.9□□□□□ -0.18
COL21A1-211ENST00000488912 API5Q9BZZ5 524 aaKnown RBP13.9□□□□□ -0.18
COL21A1-211ENST00000488912 MARCH10Q8NA82 808 aaPredicted RBP13.9□□□□□ -0.18
COL21A1-211ENST00000488912 CHPF2Q9P2E5 772 aa13.9□□□□□ -0.18
COL21A1-211ENST00000488912 ATRNO75882 1429 aa13.89□□□□□ -0.19
COL21A1-211ENST00000488912 FMNL2Q96PY5 1086 aa13.89□□□□□ -0.19
COL21A1-211ENST00000488912 BCL9O00512 1426 aa13.89□□□□□ -0.19
COL21A1-211ENST00000488912 FLIIQ13045 1269 aa13.89□□□□□ -0.19
COL21A1-211ENST00000488912 PIGBQ92521 554 aa13.89□□□□□ -0.19
COL21A1-211ENST00000488912 GJD4Q96KN9 370 aaPredicted RBP13.88□□□□□ -0.19
COL21A1-211ENST00000488912 A0A0G2JS52 829 aa13.87□□□□□ -0.19
COL21A1-211ENST00000488912 SNRPA1P09661 255 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms