RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 G2E3Q7L622 706 aa18.41■□□□□ 0.54
TFAP2A-215ENST00000488193 STRN4Q9NRL3 753 aa18.41■□□□□ 0.54
TFAP2A-215ENST00000488193 DDX19BQ9UMR2 479 aa18.41■□□□□ 0.54
TFAP2A-215ENST00000488193 BTBD11A6QL63 1104 aa18.41■□□□□ 0.54
TFAP2A-215ENST00000488193 TOM1O60784 492 aa18.41■□□□□ 0.54
TFAP2A-215ENST00000488193 SLC4A2P04920 1241 aa18.41■□□□□ 0.54
TFAP2A-215ENST00000488193 ZBTB40Q9NUA8 1239 aa18.41■□□□□ 0.54
TFAP2A-215ENST00000488193 SOS1Q07889 1333 aaPredicted RBP18.41■□□□□ 0.54
TFAP2A-215ENST00000488193 HEG1Q9ULI3 1381 aa18.41■□□□□ 0.54
TFAP2A-215ENST00000488193 SHANK3Q9BYB0 1731 aa18.41■□□□□ 0.54
TFAP2A-215ENST00000488193 PIP4K2BP78356 416 aa18.4■□□□□ 0.54
TFAP2A-215ENST00000488193 IFNL2Q8IZJ0 200 aa18.4■□□□□ 0.54
TFAP2A-215ENST00000488193 BTG4Q9NY30 223 aa18.4■□□□□ 0.54
TFAP2A-215ENST00000488193 API5Q9BZZ5 524 aaKnown RBP18.39■□□□□ 0.54
TFAP2A-215ENST00000488193 CACNA1FO60840 1977 aa18.39■□□□□ 0.53
TFAP2A-215ENST00000488193 MRC1P22897 1456 aa18.39■□□□□ 0.53
TFAP2A-215ENST00000488193 ZBTB7BO15156 539 aaPredicted RBP18.38■□□□□ 0.53
TFAP2A-215ENST00000488193 EVA1CP58658 441 aa18.38■□□□□ 0.53
TFAP2A-215ENST00000488193 SLC52A2Q9HAB3 445 aa18.37■□□□□ 0.53
TFAP2A-215ENST00000488193 PTPRCP08575 1304 aa18.37■□□□□ 0.53
TFAP2A-215ENST00000488193 IL2RBP14784 551 aa18.37■□□□□ 0.53
TFAP2A-215ENST00000488193 ZCRB1Q8TBF4 217 aaKnown RBP18.37■□□□□ 0.53
TFAP2A-215ENST00000488193 CCDC30Q5VVM6 783 aa18.36■□□□□ 0.53
TFAP2A-215ENST00000488193 NECTIN2Q92692 538 aa18.36■□□□□ 0.53
TFAP2A-215ENST00000488193 DCAF5Q96JK2 942 aa18.36■□□□□ 0.53
TFAP2A-215ENST00000488193 UBAP1LF5GYI3 381 aa18.35■□□□□ 0.53
TFAP2A-215ENST00000488193 HOXB7P09629 217 aa18.35■□□□□ 0.53
TFAP2A-215ENST00000488193 INTS3Q68E01 1043 aaKnown RBP18.35■□□□□ 0.53
TFAP2A-215ENST00000488193 NFATC2IPQ8NCF5 419 aa18.35■□□□□ 0.53
TFAP2A-215ENST00000488193 PLCH1Q4KWH8 1693 aa18.34■□□□□ 0.53
TFAP2A-215ENST00000488193 DISP2A7MBM2 1401 aa18.34■□□□□ 0.53
TFAP2A-215ENST00000488193 GIGYF1O75420 1035 aaPredicted RBP18.33■□□□□ 0.53
TFAP2A-215ENST00000488193 HDGFL1Q5TGJ6 251 aa18.33■□□□□ 0.53
TFAP2A-215ENST00000488193 PCDH11XQ9BZA7 1347 aa18.33■□□□□ 0.52
TFAP2A-215ENST00000488193 PCDH11YQ9BZA8 1340 aa18.33■□□□□ 0.52
TFAP2A-215ENST00000488193 PRAMEF22A3QJZ6 481 aa18.33■□□□□ 0.52
TFAP2A-215ENST00000488193 SLC39A6Q13433 755 aa18.33■□□□□ 0.52
TFAP2A-215ENST00000488193 NKX1-1Q15270 411 aaPredicted RBP18.33■□□□□ 0.52
TFAP2A-215ENST00000488193 STK31Q9BXU1 1019 aa18.33■□□□□ 0.52
TFAP2A-215ENST00000488193 NRAPQ86VF7 1730 aa18.33■□□□□ 0.52
TFAP2A-215ENST00000488193 HSP90AB1P08238 724 aaKnown RBP18.32■□□□□ 0.52
TFAP2A-215ENST00000488193 FLIIQ13045 1269 aa18.32■□□□□ 0.52
TFAP2A-215ENST00000488193 F6X3S4 739 aa18.31■□□□□ 0.52
TFAP2A-215ENST00000488193 ADAMTS2O95450 1211 aa18.31■□□□□ 0.52
TFAP2A-215ENST00000488193 ZNF790Q6PG37 636 aa18.31■□□□□ 0.52
TFAP2A-215ENST00000488193 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
TFAP2A-215ENST00000488193 EIF2S2P20042 333 aaKnown RBP18.31■□□□□ 0.52
TFAP2A-215ENST00000488193 HDAC1Q13547 482 aaPredicted RBP18.31■□□□□ 0.52
TFAP2A-215ENST00000488193 C5P01031 1676 aa18.3■□□□□ 0.52
TFAP2A-215ENST00000488193 PHAXQ9H814 394 aaKnown RBP18.3■□□□□ 0.52
TFAP2A-215ENST00000488193 GLI3P10071 1580 aa18.3■□□□□ 0.52
TFAP2A-215ENST00000488193 RWDD1Q9H446 243 aaPredicted RBP18.29■□□□□ 0.52
TFAP2A-215ENST00000488193 CHPF2Q9P2E5 772 aa18.29■□□□□ 0.52
TFAP2A-215ENST00000488193 TOGARAM1Q9Y4F4 1720 aa18.29■□□□□ 0.52
TFAP2A-215ENST00000488193 WNK3Q9BYP7 1800 aa18.29■□□□□ 0.52
TFAP2A-215ENST00000488193 C1orf115Q9H7X2 142 aa18.29■□□□□ 0.52
TFAP2A-215ENST00000488193 N4BP2Q86UW6 1770 aaPredicted RBP18.28■□□□□ 0.52
TFAP2A-215ENST00000488193 CABP4P57796 275 aa18.27■□□□□ 0.52
TFAP2A-215ENST00000488193 AEBP2Q6ZN18 517 aaPredicted RBP18.27■□□□□ 0.52
TFAP2A-215ENST00000488193 SIRT2Q8IXJ6 389 aa18.27■□□□□ 0.52
TFAP2A-215ENST00000488193 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.52
TFAP2A-215ENST00000488193 ZNF496Q96IT1 587 aaPredicted RBP18.27■□□□□ 0.52
TFAP2A-215ENST00000488193 NUTM2BA6NNL0 878 aaPredicted RBP18.26■□□□□ 0.51
TFAP2A-215ENST00000488193 NUTM2EB1AL46 878 aaPredicted RBP18.26■□□□□ 0.51
TFAP2A-215ENST00000488193 ERVV-2B6SEH9 535 aa18.26■□□□□ 0.51
TFAP2A-215ENST00000488193 ANXA1P04083 346 aa18.26■□□□□ 0.51
TFAP2A-215ENST00000488193 NUTM2AQ8IVF1 878 aaPredicted RBP18.26■□□□□ 0.51
TFAP2A-215ENST00000488193 CERKQ8TCT0 537 aa18.26■□□□□ 0.51
TFAP2A-215ENST00000488193 SLIT2O94813 1529 aa18.26■□□□□ 0.51
TFAP2A-215ENST00000488193 FKBP5Q13451 457 aaPredicted RBP18.26■□□□□ 0.51
TFAP2A-215ENST00000488193 PROSER3Q2NL68 480 aa18.26■□□□□ 0.51
TFAP2A-215ENST00000488193 RBM19Q9Y4C8 960 aaKnown RBP18.26■□□□□ 0.51
TFAP2A-215ENST00000488193 PAPPAQ13219 1627 aa18.26■□□□□ 0.51
TFAP2A-215ENST00000488193 PDIA6Q15084 440 aa18.25■□□□□ 0.51
TFAP2A-215ENST00000488193 CHMP4BQ9H444 224 aaKnown RBP18.25■□□□□ 0.51
TFAP2A-215ENST00000488193 NWD2Q9ULI1 1742 aa18.25■□□□□ 0.51
TFAP2A-215ENST00000488193 SMC5Q8IY18 1101 aa18.24■□□□□ 0.51
TFAP2A-215ENST00000488193 MEIS3Q99687 375 aa18.24■□□□□ 0.51
TFAP2A-215ENST00000488193 PDZRN3Q9UPQ7 1066 aa18.24■□□□□ 0.51
TFAP2A-215ENST00000488193 UBR2Q8IWV8 1755 aa18.24■□□□□ 0.51
TFAP2A-215ENST00000488193 CCT4P50991 539 aaKnown RBP18.24■□□□□ 0.51
TFAP2A-215ENST00000488193 SPATA31A1Q5TZJ5 1347 aa18.24■□□□□ 0.51
TFAP2A-215ENST00000488193 ATP10DQ9P241 1426 aa18.23■□□□□ 0.51
TFAP2A-215ENST00000488193 SLC4A10Q6U841 1118 aa18.23■□□□□ 0.51
TFAP2A-215ENST00000488193 DBF4Q9UBU7 674 aaPredicted RBP18.23■□□□□ 0.51
TFAP2A-215ENST00000488193 PXDNLA1KZ92 1463 aa18.23■□□□□ 0.51
TFAP2A-215ENST00000488193 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
TFAP2A-215ENST00000488193 KCPQ6ZWJ8 1503 aa18.22■□□□□ 0.51
TFAP2A-215ENST00000488193 JCADQ9P266 1359 aa18.22■□□□□ 0.51
TFAP2A-215ENST00000488193 RGS3P49796 1198 aa18.21■□□□□ 0.51
TFAP2A-215ENST00000488193 USP16Q9Y5T5 823 aa18.21■□□□□ 0.51
TFAP2A-215ENST00000488193 ADCY9O60503 1353 aa18.21■□□□□ 0.51
TFAP2A-215ENST00000488193 TNS2Q63HR2 1409 aa18.2■□□□□ 0.5
TFAP2A-215ENST00000488193 SPATA31A5Q5VU36 1347 aa18.2■□□□□ 0.5
TFAP2A-215ENST00000488193 SPATA31A7Q8IWB4 1347 aa18.2■□□□□ 0.5
TFAP2A-215ENST00000488193 FMNL2Q96PY5 1086 aa18.2■□□□□ 0.5
TFAP2A-215ENST00000488193 ITGB4P16144 1822 aa18.2■□□□□ 0.5
TFAP2A-215ENST00000488193 LRP10Q7Z4F1 713 aa18.2■□□□□ 0.5
TFAP2A-215ENST00000488193 TTC5Q8N0Z6 440 aa18.2■□□□□ 0.5
TFAP2A-215ENST00000488193 DDX21Q9NR30 783 aaKnown RBP eCLIP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms