RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 TAS1R3Q7RTX0 852 aa9.03□□□□□ -0.96
UBR3-211ENST00000487689 GDF2Q9UK05 429 aaPredicted RBP9.03□□□□□ -0.96
UBR3-211ENST00000487689 ZBBXA8MT70 800 aa9.02□□□□□ -0.97
UBR3-211ENST00000487689 ERVK-9P63128 1117 aa9.02□□□□□ -0.97
UBR3-211ENST00000487689 CLN3Q13286 438 aa9.02□□□□□ -0.97
UBR3-211ENST00000487689 CC2D2BQ6DHV5 1058 aa9.02□□□□□ -0.97
UBR3-211ENST00000487689 LINC00114Q6XXX2 140 aa9.02□□□□□ -0.97
UBR3-211ENST00000487689 PCDHB9Q9Y5E1 797 aa9.02□□□□□ -0.97
UBR3-211ENST00000487689 AMPD1P23109 780 aa9.01□□□□□ -0.97
UBR3-211ENST00000487689 ESF1Q9H501 851 aaKnown RBP9.01□□□□□ -0.97
UBR3-211ENST00000487689 GPAMQ9HCL2 828 aa9.01□□□□□ -0.97
UBR3-211ENST00000487689 PRM3Q9NNZ6 103 aa9.01□□□□□ -0.97
UBR3-211ENST00000487689 PHF24Q9UPV7 400 aa9.01□□□□□ -0.97
UBR3-211ENST00000487689 HOXB4P17483 251 aaPredicted RBP9□□□□□ -0.97
UBR3-211ENST00000487689 ITGB7P26010 798 aa9□□□□□ -0.97
UBR3-211ENST00000487689 CYP2U1Q7Z449 544 aa9□□□□□ -0.97
UBR3-211ENST00000487689 CD163Q86VB7 1156 aa9□□□□□ -0.97
UBR3-211ENST00000487689 CCDC125Q86Z20 511 aa9□□□□□ -0.97
UBR3-211ENST00000487689 GOLGA6L1Q8N7Z2 621 aa9□□□□□ -0.97
UBR3-211ENST00000487689 MCCD1P59942 119 aaPredicted RBP8.99□□□□□ -0.97
UBR3-211ENST00000487689 RNF20Q5VTR2 975 aa8.99□□□□□ -0.97
UBR3-211ENST00000487689 BANK1Q8NDB2 785 aa8.99□□□□□ -0.97
UBR3-211ENST00000487689 TRIM34Q9BYJ4 488 aa8.99□□□□□ -0.97
UBR3-211ENST00000487689 ARHGEF10LQ9HCE6 1279 aa8.99□□□□□ -0.97
UBR3-211ENST00000487689 GNB5O14775 395 aa8.97□□□□□ -0.97
UBR3-211ENST00000487689 CHRNA4P43681 627 aa8.97□□□□□ -0.97
UBR3-211ENST00000487689 SCTRP47872 440 aa8.97□□□□□ -0.97
UBR3-211ENST00000487689 KRTAP1-3Q8IUG1 177 aa8.97□□□□□ -0.97
UBR3-211ENST00000487689 SEMA6BQ9H3T3 888 aa8.97□□□□□ -0.97
UBR3-211ENST00000487689 NDUFB9Q9Y6M9 179 aa8.97□□□□□ -0.97
UBR3-211ENST00000487689 PIK3R2O00459 728 aa8.96□□□□□ -0.98
UBR3-211ENST00000487689 BMP4P12644 408 aa8.96□□□□□ -0.98
UBR3-211ENST00000487689 PHKA2P46019 1235 aa8.96□□□□□ -0.98
UBR3-211ENST00000487689 UBAP2LQ14157 1087 aaKnown RBP8.96□□□□□ -0.98
UBR3-211ENST00000487689 SLCO4C1Q6ZQN7 724 aa8.96□□□□□ -0.98
UBR3-211ENST00000487689 GGA1Q9UJY5 639 aa8.96□□□□□ -0.98
UBR3-211ENST00000487689 C2CD2LO14523 706 aa8.95□□□□□ -0.98
UBR3-211ENST00000487689 DOC2BQ14184 412 aa8.95□□□□□ -0.98
UBR3-211ENST00000487689 RAB6BQ9NRW1 208 aa8.95□□□□□ -0.98
UBR3-211ENST00000487689 FBXO45P0C2W1 286 aa8.94□□□□□ -0.98
UBR3-211ENST00000487689 NR1H3Q13133 447 aa8.94□□□□□ -0.98
UBR3-211ENST00000487689 ZMYM1Q5SVZ6 1142 aa8.94□□□□□ -0.98
UBR3-211ENST00000487689 BTBD6Q96KE9 485 aa8.94□□□□□ -0.98
UBR3-211ENST00000487689 OSBPL3Q9H4L5 887 aa8.94□□□□□ -0.98
UBR3-211ENST00000487689 A0A1B0GTH6 734 aa8.93□□□□□ -0.98
UBR3-211ENST00000487689 SOCS7O14512 581 aa8.93□□□□□ -0.98
UBR3-211ENST00000487689 TRAK2O60296 914 aa8.93□□□□□ -0.98
UBR3-211ENST00000487689 ABHD17AQ96GS6 310 aa8.93□□□□□ -0.98
UBR3-211ENST00000487689 GJD4Q96KN9 370 aaPredicted RBP8.93□□□□□ -0.98
UBR3-211ENST00000487689 RUBCNLQ9H714 662 aa8.93□□□□□ -0.98
UBR3-211ENST00000487689 ATXN7L1Q9ULK2 861 aaPredicted RBP8.93□□□□□ -0.98
UBR3-211ENST00000487689 CSB-PGBD3P0DP91 1061 aa8.92□□□□□ -0.98
UBR3-211ENST00000487689 CTBSQ01459 385 aa8.92□□□□□ -0.98
UBR3-211ENST00000487689 CENPCQ03188 943 aa8.92□□□□□ -0.98
UBR3-211ENST00000487689 LBRQ14739 615 aaKnown RBP8.92□□□□□ -0.98
UBR3-211ENST00000487689 PGBD3Q8N328 593 aa8.92□□□□□ -0.98
UBR3-211ENST00000487689 CNKSR1Q969H4 720 aa8.92□□□□□ -0.98
UBR3-211ENST00000487689 PCDHB11Q9Y5F2 797 aa8.92□□□□□ -0.98
UBR3-211ENST00000487689 EPXP11678 715 aa8.91□□□□□ -0.98
UBR3-211ENST00000487689 FGFR3P22607 806 aa8.91□□□□□ -0.98
UBR3-211ENST00000487689 DGKGP49619 791 aa8.91□□□□□ -0.98
UBR3-211ENST00000487689 ESYT1Q9BSJ8 1104 aa8.91□□□□□ -0.98
UBR3-211ENST00000487689 NOP53Q9NZM5 478 aaKnown RBP8.91□□□□□ -0.98
UBR3-211ENST00000487689 IL2RAP01589 272 aa8.9□□□□□ -0.98
UBR3-211ENST00000487689 ZSCAN10Q96SZ4 725 aaPredicted RBP8.9□□□□□ -0.98
UBR3-211ENST00000487689 MSX1P28360 303 aa8.89□□□□□ -0.99
UBR3-211ENST00000487689 EFHC2Q5JST6 749 aa8.89□□□□□ -0.99
UBR3-211ENST00000487689 BNIP3LO60238 219 aa8.88□□□□□ -0.99
UBR3-211ENST00000487689 GNRH1P01148 92 aa8.88□□□□□ -0.99
UBR3-211ENST00000487689 RNF135Q8IUD6 432 aa8.88□□□□□ -0.99
UBR3-211ENST00000487689 NDFIP2Q9NV92 336 aa8.88□□□□□ -0.99
UBR3-211ENST00000487689 NEURL1BA8MQ27 555 aa8.87□□□□□ -0.99
UBR3-211ENST00000487689 ARAFP10398 606 aa8.87□□□□□ -0.99
UBR3-211ENST00000487689 C4orf17Q53FE4 359 aa8.87□□□□□ -0.99
UBR3-211ENST00000487689 GNASQ5JWF2 1037 aa8.87□□□□□ -0.99
UBR3-211ENST00000487689 MTMR14Q8NCE2 650 aa8.87□□□□□ -0.99
UBR3-211ENST00000487689 SCO2A0A1W2PP80 73 aa8.86□□□□□ -0.99
UBR3-211ENST00000487689 MYCP01106 439 aaPredicted RBP8.86□□□□□ -0.99
UBR3-211ENST00000487689 GTF2E1P29083 439 aaPredicted RBP8.86□□□□□ -0.99
UBR3-211ENST00000487689 GATA4P43694 442 aa8.86□□□□□ -0.99
UBR3-211ENST00000487689 EIF4G2P78344 907 aaKnown RBP eCLIP8.86□□□□□ -0.99
UBR3-211ENST00000487689 TMEM214Q6NUQ4 689 aaKnown RBP8.86□□□□□ -0.99
UBR3-211ENST00000487689 HRH3Q9Y5N1 445 aa8.86□□□□□ -0.99
UBR3-211ENST00000487689 LCE3BQ5TA77 95 aa8.85□□□□□ -0.99
UBR3-211ENST00000487689 CHSY3Q70JA7 882 aa8.85□□□□□ -0.99
UBR3-211ENST00000487689 FHDC1Q9C0D6 1143 aaPredicted RBP8.85□□□□□ -0.99
UBR3-211ENST00000487689 SNRKQ9NRH2 765 aa8.85□□□□□ -0.99
UBR3-211ENST00000487689 XAGE2Q96GT9 111 aa8.84□□□□□ -0.99
UBR3-211ENST00000487689 FOXD4L6Q3SYB3 417 aaPredicted RBP8.83□□□□□ -1
UBR3-211ENST00000487689 FOXD4L3Q6VB84 417 aaPredicted RBP8.83□□□□□ -1
UBR3-211ENST00000487689 KRTAP4-12Q9BQ66 201 aa8.83□□□□□ -1
UBR3-211ENST00000487689 RSPO4Q2I0M5 234 aaPredicted RBP8.82□□□□□ -1
UBR3-211ENST00000487689 CRISPLD1Q9H336 500 aa8.81□□□□□ -1
UBR3-211ENST00000487689 SLFNL1Q499Z3 407 aa8.8□□□□□ -1
UBR3-211ENST00000487689 TRIM11Q96F44 468 aa8.8□□□□□ -1
UBR3-211ENST00000487689 PLVAPQ9BX97 442 aa8.8□□□□□ -1
UBR3-211ENST00000487689 FIGNL1Q6PIW4 674 aa8.79□□□□□ -1
UBR3-211ENST00000487689 RHBDD1Q8TEB9 315 aa8.79□□□□□ -1
UBR3-211ENST00000487689 SIRT1Q96EB6 747 aa8.79□□□□□ -1
UBR3-211ENST00000487689 CDCA7Q9BWT1 371 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms