RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ZNF592Q92610 1267 aa8.55□□□□□ -1.04
SNRNP40-205ENST00000486941 ZSCAN10Q96SZ4 725 aaPredicted RBP8.55□□□□□ -1.04
SNRNP40-205ENST00000486941 BCRP11274 1271 aa8.54□□□□□ -1.04
SNRNP40-205ENST00000486941 PRKCSHP14314 528 aaPredicted RBP8.54□□□□□ -1.04
SNRNP40-205ENST00000486941 MARSP56192 900 aaKnown RBP8.54□□□□□ -1.04
SNRNP40-205ENST00000486941 DOLKQ9UPQ8 538 aa8.54□□□□□ -1.04
SNRNP40-205ENST00000486941 APBB1O00213 710 aa8.53□□□□□ -1.04
SNRNP40-205ENST00000486941 C2CD2LO14523 706 aa8.53□□□□□ -1.04
SNRNP40-205ENST00000486941 MYCP01106 439 aaPredicted RBP8.53□□□□□ -1.04
SNRNP40-205ENST00000486941 MSX1P28360 303 aa8.53□□□□□ -1.04
SNRNP40-205ENST00000486941 RNF135Q8IUD6 432 aa8.53□□□□□ -1.04
SNRNP40-205ENST00000486941 ZNF295-AS1Q8N0V1 137 aa8.53□□□□□ -1.04
SNRNP40-205ENST00000486941 RNF225M0QZC1 329 aaPredicted RBP8.52□□□□□ -1.05
SNRNP40-205ENST00000486941 MX2P20592 715 aa8.52□□□□□ -1.05
SNRNP40-205ENST00000486941 ABL2P42684 1182 aa8.52□□□□□ -1.05
SNRNP40-205ENST00000486941 EIF4G2P78344 907 aaKnown RBP eCLIP8.52□□□□□ -1.05
SNRNP40-205ENST00000486941 OXLD1Q5BKU9 147 aa8.52□□□□□ -1.05
SNRNP40-205ENST00000486941 FOXR1Q6PIV2 292 aa8.52□□□□□ -1.05
SNRNP40-205ENST00000486941 PPARGC1BQ86YN6 1023 aaKnown RBP8.52□□□□□ -1.05
SNRNP40-205ENST00000486941 ESF1Q9H501 851 aaKnown RBP8.52□□□□□ -1.05
SNRNP40-205ENST00000486941 RUBCNLQ9H714 662 aa8.52□□□□□ -1.05
SNRNP40-205ENST00000486941 PIK3CDO00329 1044 aa8.51□□□□□ -1.05
SNRNP40-205ENST00000486941 MAP3K10Q02779 954 aa8.51□□□□□ -1.05
SNRNP40-205ENST00000486941 USP4Q13107 963 aa8.51□□□□□ -1.05
SNRNP40-205ENST00000486941 MCM6Q14566 821 aa8.51□□□□□ -1.05
SNRNP40-205ENST00000486941 SCARF2Q96GP6 870 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-205ENST00000486941 CFHR5Q9BXR6 569 aa8.51□□□□□ -1.05
SNRNP40-205ENST00000486941 NDFIP2Q9NV92 336 aa8.51□□□□□ -1.05
SNRNP40-205ENST00000486941 DNMT3AQ9Y6K1 912 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-205ENST00000486941 A0A1B0GTH6 734 aa8.5□□□□□ -1.05
SNRNP40-205ENST00000486941 SHISA8B8ZZ34 492 aa8.5□□□□□ -1.05
SNRNP40-205ENST00000486941 SLFNL1Q499Z3 407 aa8.5□□□□□ -1.05
SNRNP40-205ENST00000486941 TMEM214Q6NUQ4 689 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-205ENST00000486941 KLRG1Q96E93 195 aa8.5□□□□□ -1.05
SNRNP40-205ENST00000486941 TRERF1Q96PN7 1200 aa8.5□□□□□ -1.05
SNRNP40-205ENST00000486941 USP3Q9Y6I4 520 aa8.5□□□□□ -1.05
SNRNP40-205ENST00000486941 OIP5O43482 229 aa8.49□□□□□ -1.05
SNRNP40-205ENST00000486941 SNRPNP63162 240 aaKnown RBP8.49□□□□□ -1.05
SNRNP40-205ENST00000486941 GPAT2Q6NUI2 795 aa8.49□□□□□ -1.05
SNRNP40-205ENST00000486941 KANK3Q6NY19 840 aa8.49□□□□□ -1.05
SNRNP40-205ENST00000486941 DNAAF2Q9NVR5 837 aaKnown RBP8.49□□□□□ -1.05
SNRNP40-205ENST00000486941 TMEM229AB2RXF0 380 aa8.48□□□□□ -1.05
SNRNP40-205ENST00000486941 BNIP3LO60238 219 aa8.48□□□□□ -1.05
SNRNP40-205ENST00000486941 INHAP05111 366 aa8.48□□□□□ -1.05
SNRNP40-205ENST00000486941 HOXB4P17483 251 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-205ENST00000486941 CTBSQ01459 385 aa8.48□□□□□ -1.05
SNRNP40-205ENST00000486941 ESCO1Q5FWF5 840 aa8.48□□□□□ -1.05
SNRNP40-205ENST00000486941 PLPP7Q8NBV4 271 aa8.48□□□□□ -1.05
SNRNP40-205ENST00000486941 DCAF5Q96JK2 942 aa8.48□□□□□ -1.05
SNRNP40-205ENST00000486941 ATP4AP20648 1035 aa8.47□□□□□ -1.05
SNRNP40-205ENST00000486941 GDF10P55107 478 aa8.47□□□□□ -1.05
SNRNP40-205ENST00000486941 TLR1Q15399 786 aa8.47□□□□□ -1.05
SNRNP40-205ENST00000486941 GNASQ5JWF2 1037 aa8.47□□□□□ -1.05
SNRNP40-205ENST00000486941 RHBDD1Q8TEB9 315 aa8.47□□□□□ -1.05
SNRNP40-205ENST00000486941 ABHD17AQ96GS6 310 aa8.47□□□□□ -1.05
SNRNP40-205ENST00000486941 OXCT2Q9BYC2 517 aaPredicted RBP8.47□□□□□ -1.05
SNRNP40-205ENST00000486941 COG6Q9Y2V7 657 aa8.47□□□□□ -1.05
SNRNP40-205ENST00000486941 PCDHGA11Q9Y5H2 935 aa8.47□□□□□ -1.05
SNRNP40-205ENST00000486941 CRISPLD1Q9H336 500 aa8.46□□□□□ -1.06
SNRNP40-205ENST00000486941 IQSEC3Q9UPP2 1182 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-205ENST00000486941 RB1CC1Q8TDY2 1594 aa8.46□□□□□ -1.06
SNRNP40-205ENST00000486941 PLA2G4EQ3MJ16 856 aa8.45□□□□□ -1.06
SNRNP40-205ENST00000486941 NEDD1Q8NHV4 660 aa8.45□□□□□ -1.06
SNRNP40-205ENST00000486941 POM121Q96HA1 1249 aa8.45□□□□□ -1.06
SNRNP40-205ENST00000486941 ENAMQ9NRM1 1142 aa8.45□□□□□ -1.06
SNRNP40-205ENST00000486941 LRRC4BQ9NT99 713 aa8.45□□□□□ -1.06
SNRNP40-205ENST00000486941 PLA2G4AP47712 749 aa8.44□□□□□ -1.06
SNRNP40-205ENST00000486941 SMTNP53814 917 aa8.44□□□□□ -1.06
SNRNP40-205ENST00000486941 ALG2Q9H553 416 aa8.44□□□□□ -1.06
SNRNP40-205ENST00000486941 SERTAD1Q9UHV2 236 aa8.44□□□□□ -1.06
SNRNP40-205ENST00000486941 MAP2K3P46734 347 aa8.43□□□□□ -1.06
SNRNP40-205ENST00000486941 WASHC4Q2M389 1173 aa8.43□□□□□ -1.06
SNRNP40-205ENST00000486941 MAP7D1Q3KQU3 841 aa8.43□□□□□ -1.06
SNRNP40-205ENST00000486941 BEND7Q8N7W2 519 aaPredicted RBP8.43□□□□□ -1.06
SNRNP40-205ENST00000486941 GALNT6Q8NCL4 622 aa8.43□□□□□ -1.06
SNRNP40-205ENST00000486941 SLC4A9Q96Q91 983 aa8.43□□□□□ -1.06
SNRNP40-205ENST00000486941 ZCCHC2Q9C0B9 1178 aaKnown RBP8.43□□□□□ -1.06
SNRNP40-205ENST00000486941 PRM3Q9NNZ6 103 aa8.43□□□□□ -1.06
SNRNP40-205ENST00000486941 LBRQ14739 615 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-205ENST00000486941 MTFR1Q15390 333 aa8.42□□□□□ -1.06
SNRNP40-205ENST00000486941 KLF15Q9UIH9 416 aa8.42□□□□□ -1.06
SNRNP40-205ENST00000486941 COL8A1P27658 744 aa8.41□□□□□ -1.06
SNRNP40-205ENST00000486941 SEMA3FQ13275 785 aa8.41□□□□□ -1.06
SNRNP40-205ENST00000486941 ATXN7L1Q9ULK2 861 aaPredicted RBP8.41□□□□□ -1.06
SNRNP40-205ENST00000486941 PROCP04070 461 aa8.4□□□□□ -1.06
SNRNP40-205ENST00000486941 CSB-PGBD3P0DP91 1061 aa8.4□□□□□ -1.06
SNRNP40-205ENST00000486941 FGFR3P22607 806 aa8.4□□□□□ -1.06
SNRNP40-205ENST00000486941 LINC00114Q6XXX2 140 aa8.4□□□□□ -1.06
SNRNP40-205ENST00000486941 PGBD3Q8N328 593 aa8.4□□□□□ -1.06
SNRNP40-205ENST00000486941 ADAMTS19Q8TE59 1207 aa8.4□□□□□ -1.06
SNRNP40-205ENST00000486941 EDARADDQ8WWZ3 215 aa8.4□□□□□ -1.06
SNRNP40-205ENST00000486941 SIRT1Q96EB6 747 aa8.4□□□□□ -1.06
SNRNP40-205ENST00000486941 NSFL1CQ9UNZ2 370 aaKnown RBP8.4□□□□□ -1.06
SNRNP40-205ENST00000486941 NACADO15069 1562 aa8.39□□□□□ -1.07
SNRNP40-205ENST00000486941 KRBA1A5PL33 1030 aa8.39□□□□□ -1.07
SNRNP40-205ENST00000486941 A6NJY4 79 aa8.39□□□□□ -1.07
SNRNP40-205ENST00000486941 PHF20L1A8MW92 1017 aa8.39□□□□□ -1.07
SNRNP40-205ENST00000486941 IGHA1P01876 353 aa8.39□□□□□ -1.07
SNRNP40-205ENST00000486941 EFHC2Q5JST6 749 aa8.39□□□□□ -1.07
SNRNP40-205ENST00000486941 ZDHHC1Q8WTX9 485 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms