RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 NUCKS1Q9H1E3 243 aaKnown RBP10.35□□□□□ -0.75
SCAF11-207ENST00000484275 GPAMQ9HCL2 828 aa10.35□□□□□ -0.75
SCAF11-207ENST00000484275 PIK3CDO00329 1044 aa10.34□□□□□ -0.75
SCAF11-207ENST00000484275 FOXR1Q6PIV2 292 aa10.34□□□□□ -0.75
SCAF11-207ENST00000484275 RASSF7Q02833 373 aa10.33□□□□□ -0.76
SCAF11-207ENST00000484275 UBAP2LQ14157 1087 aaKnown RBP10.33□□□□□ -0.76
SCAF11-207ENST00000484275 TMEM214Q6NUQ4 689 aaKnown RBP10.33□□□□□ -0.76
SCAF11-207ENST00000484275 POM121Q96HA1 1249 aa10.33□□□□□ -0.76
SCAF11-207ENST00000484275 SEMA3FQ13275 785 aa10.32□□□□□ -0.76
SCAF11-207ENST00000484275 PPARGC1BQ86YN6 1023 aaKnown RBP10.32□□□□□ -0.76
SCAF11-207ENST00000484275 A0A1B0GTH6 734 aa10.31□□□□□ -0.76
SCAF11-207ENST00000484275 TLR1Q15399 786 aa10.31□□□□□ -0.76
SCAF11-207ENST00000484275 MAP7D1Q3KQU3 841 aa10.31□□□□□ -0.76
SCAF11-207ENST00000484275 GNASQ5JWF2 1037 aa10.31□□□□□ -0.76
SCAF11-207ENST00000484275 ACDQ96AP0 544 aa10.31□□□□□ -0.76
SCAF11-207ENST00000484275 TRERF1Q96PN7 1200 aa10.31□□□□□ -0.76
SCAF11-207ENST00000484275 INHAP05111 366 aa10.3□□□□□ -0.76
SCAF11-207ENST00000484275 MSX1P28360 303 aa10.3□□□□□ -0.76
SCAF11-207ENST00000484275 SOX11P35716 441 aa10.3□□□□□ -0.76
SCAF11-207ENST00000484275 GDF10P55107 478 aa10.3□□□□□ -0.76
SCAF11-207ENST00000484275 KCTD17Q8N5Z5 321 aa10.3□□□□□ -0.76
SCAF11-207ENST00000484275 SIRT1Q96EB6 747 aa10.3□□□□□ -0.76
SCAF11-207ENST00000484275 GDF11O95390 407 aa10.29□□□□□ -0.76
SCAF11-207ENST00000484275 RHBDD1Q8TEB9 315 aa10.29□□□□□ -0.76
SCAF11-207ENST00000484275 ALG2Q9H553 416 aa10.29□□□□□ -0.76
SCAF11-207ENST00000484275 RUBCNLQ9H714 662 aa10.29□□□□□ -0.76
SCAF11-207ENST00000484275 MX2P20592 715 aa10.28□□□□□ -0.76
SCAF11-207ENST00000484275 IRS1P35568 1242 aa10.28□□□□□ -0.76
SCAF11-207ENST00000484275 MAP3K10Q02779 954 aa10.28□□□□□ -0.76
SCAF11-207ENST00000484275 TMEM151AQ8N4L1 468 aa10.28□□□□□ -0.76
SCAF11-207ENST00000484275 TMEM229AB2RXF0 380 aa10.27□□□□□ -0.77
SCAF11-207ENST00000484275 RNF225M0QZC1 329 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-207ENST00000484275 GTF2E1P29083 439 aaPredicted RBP10.27□□□□□ -0.77
SCAF11-207ENST00000484275 MARSP56192 900 aaKnown RBP10.27□□□□□ -0.77
SCAF11-207ENST00000484275 BCRP11274 1271 aa10.26□□□□□ -0.77
SCAF11-207ENST00000484275 ZNF295-AS1Q8N0V1 137 aa10.26□□□□□ -0.77
SCAF11-207ENST00000484275 CFHR5Q9BXR6 569 aa10.26□□□□□ -0.77
SCAF11-207ENST00000484275 PCDHGA11Q9Y5H2 935 aa10.26□□□□□ -0.77
SCAF11-207ENST00000484275 SMTNP53814 917 aa10.25□□□□□ -0.77
SCAF11-207ENST00000484275 SERTAD1Q9UHV2 236 aa10.25□□□□□ -0.77
SCAF11-207ENST00000484275 USP3Q9Y6I4 520 aa10.25□□□□□ -0.77
SCAF11-207ENST00000484275 PLA2G4AP47712 749 aa10.24□□□□□ -0.77
SCAF11-207ENST00000484275 POM121CA8CG34 1229 aa10.23□□□□□ -0.77
SCAF11-207ENST00000484275 SKIP12755 728 aa10.23□□□□□ -0.77
SCAF11-207ENST00000484275 ATP4AP20648 1035 aa10.23□□□□□ -0.77
SCAF11-207ENST00000484275 LBRQ14739 615 aaKnown RBP10.23□□□□□ -0.77
SCAF11-207ENST00000484275 SCARF2Q96GP6 870 aaPredicted RBP10.23□□□□□ -0.77
SCAF11-207ENST00000484275 SLC4A9Q96Q91 983 aa10.23□□□□□ -0.77
SCAF11-207ENST00000484275 CRISPLD1Q9H336 500 aa10.23□□□□□ -0.77
SCAF11-207ENST00000484275 NDFIP2Q9NV92 336 aa10.23□□□□□ -0.77
SCAF11-207ENST00000484275 IQSEC3Q9UPP2 1182 aaPredicted RBP10.23□□□□□ -0.77
SCAF11-207ENST00000484275 C2CD2LO14523 706 aa10.22□□□□□ -0.77
SCAF11-207ENST00000484275 CSB-PGBD3P0DP91 1061 aa10.22□□□□□ -0.77
SCAF11-207ENST00000484275 C1orf229Q6ZS94 237 aaPredicted RBP10.22□□□□□ -0.77
SCAF11-207ENST00000484275 PGBD3Q8N328 593 aa10.22□□□□□ -0.77
SCAF11-207ENST00000484275 ADAMTS19Q8TE59 1207 aa10.22□□□□□ -0.77
SCAF11-207ENST00000484275 ABHD17AQ96GS6 310 aa10.22□□□□□ -0.77
SCAF11-207ENST00000484275 ENAMQ9NRM1 1142 aa10.22□□□□□ -0.77
SCAF11-207ENST00000484275 CNTNAP5Q8WYK1 1306 aa10.22□□□□□ -0.77
SCAF11-207ENST00000484275 BNIP3LO60238 219 aa10.21□□□□□ -0.77
SCAF11-207ENST00000484275 MTFR1Q15390 333 aa10.21□□□□□ -0.77
SCAF11-207ENST00000484275 KLRG1Q96E93 195 aa10.21□□□□□ -0.77
SCAF11-207ENST00000484275 OXCT2Q9BYC2 517 aaPredicted RBP10.21□□□□□ -0.77
SCAF11-207ENST00000484275 DNAAF2Q9NVR5 837 aaKnown RBP10.21□□□□□ -0.77
SCAF11-207ENST00000484275 OIP5O43482 229 aa10.2□□□□□ -0.78
SCAF11-207ENST00000484275 NCOA4Q13772 614 aa10.2□□□□□ -0.78
SCAF11-207ENST00000484275 EML3Q32P44 896 aa10.2□□□□□ -0.78
SCAF11-207ENST00000484275 EFHC2Q5JST6 749 aa10.2□□□□□ -0.78
SCAF11-207ENST00000484275 TBC1D9Q6ZT07 1266 aa10.2□□□□□ -0.78
SCAF11-207ENST00000484275 NIFKQ9BYG3 293 aaKnown RBP10.2□□□□□ -0.78
SCAF11-207ENST00000484275 HCN2Q9UL51 889 aa10.2□□□□□ -0.78
SCAF11-207ENST00000484275 NSFL1CQ9UNZ2 370 aaKnown RBP10.2□□□□□ -0.78
SCAF11-207ENST00000484275 PHF24Q9UPV7 400 aa10.2□□□□□ -0.78
SCAF11-207ENST00000484275 A6NJY4 79 aa10.19□□□□□ -0.78
SCAF11-207ENST00000484275 MAP2K3P46734 347 aa10.19□□□□□ -0.78
SCAF11-207ENST00000484275 CTBSQ01459 385 aa10.19□□□□□ -0.78
SCAF11-207ENST00000484275 KANK3Q6NY19 840 aa10.19□□□□□ -0.78
SCAF11-207ENST00000484275 DEPDC4Q8N2C3 294 aa10.19□□□□□ -0.78
SCAF11-207ENST00000484275 NFATC2IPQ8NCF5 419 aa10.19□□□□□ -0.78
SCAF11-207ENST00000484275 NEDD1Q8NHV4 660 aa10.19□□□□□ -0.78
SCAF11-207ENST00000484275 LRRC4BQ9NT99 713 aa10.19□□□□□ -0.78
SCAF11-207ENST00000484275 ATXN7L1Q9ULK2 861 aaPredicted RBP10.19□□□□□ -0.78
SCAF11-207ENST00000484275 CDK2AP1O14519 115 aa10.18□□□□□ -0.78
SCAF11-207ENST00000484275 GTF2IP78347 998 aa10.18□□□□□ -0.78
SCAF11-207ENST00000484275 AIDAQ96BJ3 306 aa10.18□□□□□ -0.78
SCAF11-207ENST00000484275 USP17L5A8MUK1 530 aa10.17□□□□□ -0.78
SCAF11-207ENST00000484275 SHISA8B8ZZ34 492 aa10.17□□□□□ -0.78
SCAF11-207ENST00000484275 UBTFP17480 764 aaKnown RBP10.17□□□□□ -0.78
SCAF11-207ENST00000484275 ZCCHC2Q9C0B9 1178 aaKnown RBP10.17□□□□□ -0.78
SCAF11-207ENST00000484275 NOD1Q9Y239 953 aa10.17□□□□□ -0.78
SCAF11-207ENST00000484275 DNMT3AQ9Y6K1 912 aaPredicted RBP10.17□□□□□ -0.78
SCAF11-207ENST00000484275 RAD21O60216 631 aa10.16□□□□□ -0.78
SCAF11-207ENST00000484275 FGFR3P22607 806 aa10.16□□□□□ -0.78
SCAF11-207ENST00000484275 FLIIQ13045 1269 aa10.16□□□□□ -0.78
SCAF11-207ENST00000484275 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.16□□□□□ -0.78
SCAF11-207ENST00000484275 UCN2Q96RP3 112 aa10.16□□□□□ -0.78
SCAF11-207ENST00000484275 ZNF358Q9NW07 568 aa10.16□□□□□ -0.78
SCAF11-207ENST00000484275 LZTS3O60299 673 aaPredicted RBP10.15□□□□□ -0.78
SCAF11-207ENST00000484275 SNRPNP63162 240 aaKnown RBP10.15□□□□□ -0.78
SCAF11-207ENST00000484275 C1orf216Q8TAB5 229 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms